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BioLiP
>protein
YKVTLKTPSGEETIECPEDTYILDAAEEAGLDLPYSCRAGACSSCAGKVESGEVDQSDQSFLDDAQMGKGFVLTCVAYPT
SDVTILTHQEAALY

The query sequence (length=94) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1awd:A 94 94 1.0000 1.0000 1.0000 2.11e-65
2 7akt:A 107 94 0.8723 0.7664 0.8723 1.88e-56 6kum:A, 6kum:B, 6kv0:A, 6kv0:B, 6lk1:A, 6lk1:B, 2mh7:A, 2n0s:B, 7wzn:G
3 4zho:A 97 93 0.7447 0.7216 0.7527 8.45e-48 4zho:B
4 5auk:A 96 94 0.7553 0.7396 0.7553 1.83e-47 1dox:A, 1doy:A, 2kaj:A, 1off:A, 2pvg:C, 2pvo:D
5 6khi:1 98 95 0.7553 0.7245 0.7474 2.27e-45 5aui:A, 7fix:R1, 7fix:R2, 7fix:R3, 6jo2:A, 6l7o:R, 1roe:A, 5zf0:P1, 5zf0:P2, 5zf0:P3, 5zf0:P4, 5zf0:P6, 5zf0:P5
6 6xtf:D 96 94 0.7021 0.6875 0.7021 4.70e-45 6xtf:C
7 4fxc:A 98 96 0.7447 0.7143 0.7292 1.09e-44
8 6yac:N 97 93 0.7234 0.7010 0.7312 1.20e-44 6yez:N
9 4itk:A 104 93 0.6809 0.6154 0.6882 1.47e-44
10 7y5e:NN 99 96 0.7340 0.6970 0.7188 2.55e-44 7y5e:N2, 7y7a:N7, 7y7a:No
11 3b2g:A 98 96 0.7340 0.7041 0.7188 9.24e-44 3b2g:B
12 1a70:A 97 93 0.6596 0.6392 0.6667 3.00e-43
13 3av8:A 97 95 0.7128 0.6907 0.7053 4.21e-43 3av8:B, 3av8:C, 3av8:D, 1fxi:A, 1fxi:B, 1fxi:C, 1fxi:D
14 7s3d:X 97 96 0.7128 0.6907 0.6979 1.08e-42 7s3d:W, 7s3d:x
15 1frr:A 95 94 0.6915 0.6842 0.6915 1.76e-42 1frr:B
16 1gaq:B 98 93 0.6809 0.6531 0.6882 2.43e-42 3b2f:A, 3b2f:B, 5h8y:E, 5h8y:F, 5h92:C, 3w5u:B, 3w5u:D, 3w5u:F, 3w5u:H, 3w5v:B, 3w5v:D
17 1pfd:A 96 93 0.6596 0.6458 0.6667 6.70e-42
18 3ab5:A 97 96 0.6915 0.6701 0.6771 1.36e-41 3ab5:B, 3wcq:A
19 1rfk:B 97 95 0.7128 0.6907 0.7053 2.54e-41 3p63:A, 3p63:B, 1rfk:A
20 5h57:A 97 95 0.6809 0.6598 0.6737 7.70e-41 5h57:B, 5h57:C, 5h57:D, 5h57:E, 5h57:F, 5h5j:B
21 4zhp:A 98 93 0.6915 0.6633 0.6989 7.94e-41
22 1czp:A 98 96 0.6915 0.6633 0.6771 1.73e-40 1czp:B, 1ewy:C, 1fxa:A, 1fxa:B, 1j7a:A, 1j7b:A, 1j7c:A, 1qoa:A, 1qoa:B, 1qob:A, 1qob:B, 1qof:A, 1qof:B, 1qog:A, 1qog:B, 1qt9:A
23 6vjv:A 96 94 0.5957 0.5833 0.5957 1.24e-35 6vjv:B
24 1iue:A 98 94 0.5426 0.5204 0.5426 1.60e-35 1iue:B
25 6iri:A 107 95 0.5638 0.4953 0.5579 1.62e-30
26 1wri:A 93 93 0.5532 0.5591 0.5591 7.31e-30
27 8jc1:A 267 93 0.6064 0.2135 0.6129 2.50e-29 8jc1:B, 8jc1:C, 8jc1:D
28 1frd:A 98 95 0.6277 0.6020 0.6211 1.61e-27
29 4n58:A 266 90 0.5532 0.1955 0.5778 1.39e-25 4n58:B, 4n59:A, 4n59:B
30 1e0z:A 128 82 0.3723 0.2734 0.4268 2.31e-16 1e10:A
31 1doi:A 128 82 0.3511 0.2578 0.4024 5.92e-15
32 1krh:A 337 66 0.2447 0.0682 0.3485 1.08e-07 1krh:B
33 3zyy:X 628 86 0.2979 0.0446 0.3256 2.61e-07 4c1n:J, 4c1n:I, 4c1n:K, 4c1n:X, 3zyy:Y
34 2pia:A 321 83 0.2553 0.0748 0.2892 7.75e-07
35 5ogx:A 333 91 0.2766 0.0781 0.2857 9.21e-07
36 1jq4:A 98 88 0.2979 0.2857 0.3182 2.43e-06
37 4wqm:A 326 73 0.2553 0.0736 0.3288 6.67e-05
38 6laa:A 753 63 0.2021 0.0252 0.3016 6.89e-04 6gii:A, 6ldl:A
39 6kbh:A 765 70 0.2021 0.0248 0.2714 0.001
40 7ylr:A 326 42 0.1809 0.0521 0.4048 0.002
41 5frt:E 105 58 0.1809 0.1619 0.2931 0.008 5ffi:E
42 7c3b:B 306 81 0.2553 0.0784 0.2963 0.020
43 7c3b:C 334 81 0.2553 0.0719 0.2963 0.029 7c3a:A, 7c3a:B, 7c3a:C, 7c3b:A
44 5frt:A 119 53 0.1809 0.1429 0.3208 0.030 5ffi:A, 5ffi:B, 5ffi:C, 5ffi:D, 5frt:B, 5frt:C, 5frt:D, 6yav:E, 6yav:A, 6yav:B, 6yav:C, 6yav:D
45 6icm:D 87 86 0.2340 0.2529 0.2558 0.074
46 8a5e:A 583 50 0.2021 0.0326 0.3800 0.28 8a5e:D, 7q4v:A, 7q4v:E, 7q4w:A, 7q4w:E
47 4hea:3 756 45 0.1489 0.0185 0.3111 0.29 2fug:3, 2fug:C, 2fug:L, 2fug:U, 4hea:D, 6i0d:3, 6i0d:D, 6i1p:3, 6i1p:D, 3i9v:3, 3i9v:C, 3iam:3, 3iam:C, 3ias:3, 3ias:C, 3ias:L, 3ias:U, 3m9s:3, 3m9s:C, 6q8o:3, 6q8o:D, 6q8w:3, 6q8w:D, 6q8x:3, 6q8x:D, 6y11:3, 6y11:D, 2ybb:3, 6ziy:3, 6zjl:3, 6zjn:3, 6zjy:3
48 7q5y:A 626 38 0.1596 0.0240 0.3947 0.35 7q5y:G, 7q5y:M, 7q5y:S
49 7awt:G 907 72 0.2234 0.0232 0.2917 0.47 7nyr:G, 7nyu:G, 7nyv:G, 7nz1:G, 7p61:G, 7p62:G, 7p63:G, 7p64:G, 7p69:G, 7p7c:G, 7p7e:G, 7p7j:G, 7p7k:G, 7p7l:G, 7p7m:G, 7z7r:G, 7z7s:G, 7z7t:G, 7z7v:G, 7z80:G, 7z83:G, 7z84:G, 7zc5:G, 7zci:G
50 6x89:S1 688 43 0.1596 0.0218 0.3488 0.66 8e73:S1
51 7arc:G 682 45 0.1489 0.0205 0.3111 0.96 7ard:G
52 8oh5:C 1172 59 0.2021 0.0162 0.3220 1.1 8oh5:F, 8oh5:I, 8oh5:L, 8oh9:C, 8oh9:F, 8oh9:I, 8oh9:L
53 7a23:C 693 43 0.1596 0.0216 0.3488 1.2 7a24:C, 7aqr:G, 7ar7:G, 7ar8:G, 7arb:G, 8bed:G, 8bpx:G, 8bq5:G, 8bq6:G
54 3kl9:A 340 34 0.1277 0.0353 0.3529 1.6 3kl9:B, 3kl9:C, 3kl9:D, 3kl9:E, 3kl9:F, 3kl9:G, 3kl9:H, 3kl9:I, 3kl9:J, 3kl9:K, 3kl9:L
55 7d6v:B 239 29 0.0957 0.0377 0.3103 2.2 7d6x:B
56 6jon:A 280 48 0.1383 0.0464 0.2708 2.3 6jop:A, 6joq:A, 6k9a:A, 7rr3:A, 7rr4:A
57 3fcc:A 500 60 0.1809 0.0340 0.2833 3.4 3dhv:A, 3fce:A
58 3sfe:B 240 26 0.1064 0.0417 0.3846 6.8 3abv:B, 3ae1:B, 3ae2:B, 3ae3:B, 3ae4:B, 3ae5:B, 3ae6:B, 3ae7:B, 3ae8:B, 3ae9:B, 3aea:B, 3aeb:B, 3aec:B, 3aed:B, 3aee:B, 3aef:B, 3aeg:B, 7kcm:C, 3sfd:B, 4ytp:B, 4yxd:B, 1zoy:B, 1zp0:B
59 3ozb:A 241 38 0.1489 0.0581 0.3684 7.3 3ozb:B, 3ozb:C, 3ozb:D, 3ozb:E, 3ozb:F

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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