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BioLiP
>protein
YCHRTTIGNFSGPYTYCNTTLDQIGTCWPQSAPGALVERPCPEYFNGIKYNTTRNAYRECLENGTWASRVNYSHCEPIL

The query sequence (length=79) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2jnd:A 79 79 1.0000 1.0000 1.0000 6.70e-56
2 3n96:A 473 68 0.7722 0.1290 0.8971 1.69e-44 3ehs:A, 3eht:A, 3n93:B, 3n93:A, 3n95:C, 3n95:D, 3n95:A, 3n95:B, 3n96:C, 3n96:D, 3n96:B
3 3ehu:A 441 68 0.5316 0.0952 0.6176 3.49e-27 3ehu:B
4 6fj3:A 562 60 0.3038 0.0427 0.4000 2.62e-09 8d51:A, 8d52:A, 7uzo:A, 7uzp:A, 7uzp:C, 7uzp:E
5 3l2j:A 484 60 0.3038 0.0496 0.4000 4.90e-09 3c4m:A, 3c4m:B, 3h3g:A, 3l2j:B
6 6nbh:R 379 60 0.3038 0.0633 0.4000 9.63e-09 8flt:R, 8ha0:R, 8haf:R, 8jr9:R, 6nbf:R, 6nbi:R
7 6wzg:R 379 57 0.2658 0.0554 0.3684 7.36e-06 7d3s:R, 6wi9:R
8 7lci:R 393 65 0.2658 0.0534 0.3231 8.14e-06 7c2e:R, 7duq:R, 7e14:R, 7evm:R, 7fim:R, 8jip:R, 8jir:R, 8jis:R, 7lcj:R, 7lck:R, 5nx2:A, 6orv:RP, 7s15:R, 7s1m:R, 7vbh:R, 7vbi:R, 6vcb:R, 6x19:R, 6x1a:R, 7x8r:R, 7x8s:R, 6xox:R
9 7f16:R 376 56 0.2532 0.0532 0.3571 2.48e-05
10 6ln2:A 437 58 0.2532 0.0458 0.3448 2.77e-05 3c59:A, 3c5t:A, 3iol:A, 5otu:A, 5otu:C, 5otv:C, 5otv:A, 5otw:C, 5otw:A, 5otx:A, 5otx:C, 4zgm:A
11 7dur:R 371 72 0.2911 0.0620 0.3194 3.74e-05 7lll:R, 7lly:R
12 6pfo:A 474 57 0.2278 0.0380 0.3158 6.12e-04 5ii0:A, 5ii0:B, 5ii0:C, 6pfo:B, 6pgq:A
13 7tyn:R 373 57 0.2278 0.0483 0.3158 0.001 9auc:R, 8f0j:R, 8f0k:R, 8f2b:R, 6niy:R, 7tyf:R, 7tyo:R, 7tyw:R, 7tyx:R, 7tyy:R, 7tzf:R
14 8e3y:R 372 61 0.2405 0.0511 0.3115 0.002 8e3z:R, 6vn7:R
15 7vvo:R 302 51 0.2278 0.0596 0.3529 0.003 8gw8:R
16 4rwf:A 555 67 0.2405 0.0342 0.2836 0.005 6v2e:A, 2xvt:C, 2xvt:F
17 7fin:R 380 60 0.2152 0.0447 0.2833 0.006 7dty:R, 7fiy:R, 7rbt:R, 7vab:R, 8yw4:R
18 4dlq:A 353 43 0.2278 0.0510 0.4186 0.013
19 5yqz:R 558 50 0.1772 0.0251 0.2800 0.018 5xez:A, 5xf1:A
20 5xez:B 499 50 0.1772 0.0281 0.2800 0.021 5xf1:B
21 6zho:A 577 67 0.2532 0.0347 0.2985 0.025 8ax5:A, 8ax6:A, 8ax7:A, 6d1u:A, 6d1u:B, 6d1u:C, 3n7r:A, 3n7r:C, 3n7r:D, 3n7r:B, 3n7s:A, 3n7s:C, 3n7s:D, 3n7s:B, 7p0f:A, 7p0i:A, 4rwg:A, 4rwg:B, 4rwg:C, 5v6y:A, 5v6y:B, 5v6y:C, 5v6y:D, 6zis:A
22 6whc:R 371 50 0.1772 0.0377 0.2800 0.036 8jru:R, 8wg8:R
23 7vqx:R 361 48 0.2025 0.0443 0.3333 0.068 7wbj:R
24 2xdg:A 89 48 0.1899 0.1685 0.3125 0.25 2xdg:B
25 7knu:R 341 65 0.2658 0.0616 0.3231 0.26
26 8e3x:R 362 51 0.2278 0.0497 0.3529 0.31 6m1i:A, 6p9y:R
27 2wp2:A 114 40 0.1646 0.1140 0.3250 0.41 7bjy:A, 8cza:B, 8cza:C, 8cza:D, 4flp:A, 4flp:B, 4kcx:A, 4kcx:B, 7lem:A, 7lem:B, 7ubo:A, 7ubo:B, 7ubo:C, 7ubo:D, 2wp2:B, 8yhs:A
28 6wpw:R 398 50 0.1772 0.0352 0.2800 0.69 8fu6:R, 8jiq:R, 8jit:R, 8jiu:R, 6lmk:R, 6lml:R, 7v35:R
29 7uuu:A 113 41 0.1646 0.1150 0.3171 1.3 7bjy:B, 8cza:A, 8cza:E, 8cza:F, 7l73:A, 7mrc:A, 7mrc:B, 7mrd:A, 7mrd:B, 7mrg:A, 7mrg:B, 7mrh:A, 7mrh:B, 5vbq:A, 5vbq:B, 5vbr:A, 5vbr:B
30 3n94:A 466 54 0.2278 0.0386 0.3333 1.7
31 6qf7:B 244 42 0.1646 0.0533 0.3095 2.6 6b74:B, 6b77:B, 6l63:A, 6l63:C, 6qf7:D, 8r8d:B, 8r8d:A, 6x0s:A, 6x0s:B, 6x0s:C, 6x0t:A, 6x0t:B, 6x0t:C
32 3v0a:A 1280 34 0.1772 0.0109 0.4118 3.3 8agk:AAA, 3bon:A, 3boo:A, 3bta:A, 3bwi:A, 3c88:A, 3c89:A, 3c8a:A, 3c8b:A, 3dda:A, 3ddb:A, 3ds9:A, 1e1h:A, 1e1h:C, 4ej5:A, 4el4:A, 4elc:A, 2g7n:A, 2g7p:A, 2g7p:B, 2g7q:A, 2g7q:B, 8hkh:A, 8hkh:B, 2ilp:A, 2ilp:B, 2ise:A, 2ise:B, 2isg:A, 2isg:B, 2ish:A, 2ish:B, 3k3q:B, 4ks6:A, 4ktx:A, 4kuf:A, 7kyf:C, 7l6v:A, 7lzp:A, 7lzp:D, 7m1h:A, 2nyy:A, 2nz9:A, 2nz9:B, 7qpt:A, 7qpu:A, 3qw5:A, 3qw6:A, 3qw7:A, 3qw8:A, 5tpb:B, 5tpc:A, 3v0b:A, 3v0c:A, 5vgv:A, 2vu9:A, 2w2d:A, 2w2d:C, 6xcb:A, 6xcc:A, 6xcd:A, 6xce:A, 6xcf:A, 1xtf:A, 1xtf:B, 1xtg:A, 4zjx:A, 3zus:A, 3zus:B, 3zus:C, 3zus:D
33 6lpb:R 331 52 0.2152 0.0514 0.3269 3.5
34 7qpt:B 390 34 0.1772 0.0359 0.4118 4.8
35 5czg:A 115 52 0.2025 0.1391 0.3077 7.3 4pkl:A, 4pkl:B
36 4aqb:A 345 31 0.1139 0.0261 0.2903 7.5 5ckq:A, 3dem:A, 3dem:B
37 8i0k:A 875 31 0.1392 0.0126 0.3548 7.7 8i0k:B, 7wgr:A, 7wgr:B
38 4d0f:A 125 58 0.2278 0.1440 0.3103 7.7 4cud:A, 4cue:A, 4cuf:A, 4d0e:A, 5ub5:B, 2vj3:A, 4xlw:A
39 8t78:A 863 45 0.1646 0.0151 0.2889 8.4
40 8t6s:A 962 45 0.1646 0.0135 0.2889 8.4
41 8t77:A 1025 45 0.1646 0.0127 0.2889 8.4
42 7s37:P 1033 45 0.1646 0.0126 0.2889 8.4 7s3h:P
43 8t76:A 1088 45 0.1646 0.0119 0.2889 8.5
44 7s4u:A 1092 45 0.1646 0.0119 0.2889 8.5
45 7s4v:A 1122 45 0.1646 0.0116 0.2889 8.5 6o0x:A, 8t6p:A
46 6o0y:A 1146 45 0.1646 0.0113 0.2889 8.5
47 8t6y:A 1148 45 0.1646 0.0113 0.2889 8.5 8t6o:A, 8t79:A
48 4zt9:C 1160 45 0.1646 0.0112 0.2889 8.5
49 4oo8:D 1163 45 0.1646 0.0112 0.2889 8.5
50 7z4d:E 1166 45 0.1646 0.0111 0.2889 8.5
51 8t6t:A 1168 45 0.1646 0.0111 0.2889 8.5 8t7s:G
52 4cmq:B 1168 45 0.1646 0.0111 0.2889 8.5 4cmp:B, 4cmq:A
53 7z4g:B 1188 45 0.1646 0.0109 0.2889 8.5 7zo1:B
54 7z4d:B 1259 45 0.1646 0.0103 0.2889 8.5
55 8t6x:A 1278 45 0.1646 0.0102 0.2889 8.5
56 6o0z:A 1288 45 0.1646 0.0101 0.2889 8.5
57 4oo8:A 1301 45 0.1646 0.0100 0.2889 8.5 4zt0:C
58 8t7s:A 1312 45 0.1646 0.0099 0.2889 8.5
59 5b2r:B 1319 45 0.1646 0.0099 0.2889 8.5 5b2s:B, 5fq5:B, 5fw1:B, 8g1i:A, 6k3z:B, 6k4s:B, 6k4u:B, 6k57:B, 7qqw:B, 4un3:B, 4un4:B, 4un5:B, 8wus:A, 8wut:A, 8wuu:A
60 5xbl:A 1320 45 0.1646 0.0098 0.2889 8.5
61 7z4j:B 1345 45 0.1646 0.0097 0.2889 8.5 6aeb:B, 6aeb:F, 6aeg:B, 6ai6:A, 5b2t:B, 5fw2:B, 5fw3:B, 8fzt:E, 6k4p:B, 6k4q:B, 8kah:B, 8kai:B, 8kaj:B, 8kak:B, 8kak:F, 8kal:B, 8kal:G, 8kam:B, 7ox7:B, 7ox8:B, 7ox9:B, 7oxa:B, 7qqo:B, 7qqp:B, 7qqq:B, 7qqr:B, 7qqs:B, 7qqt:B, 7qqu:B, 7qqv:B, 7qqx:B, 7qqz:B, 7qr0:B, 7qr1:B, 7qr5:B, 7qr7:B, 7qr8:B, 8wuv:A, 8ygj:A
62 8kag:B 1346 45 0.1646 0.0097 0.2889 8.5 8kah:F, 8kai:F, 8kaj:F, 8spq:A, 8sqh:A, 8srs:A, 8tzz:A, 8u3y:A, 6vpc:B, 7z4h:B, 7z4i:B, 7z4l:B, 4zt9:A
63 5y36:A 1368 45 0.1646 0.0095 0.2889 8.5 5f9r:B, 6ifo:A, 6ifo:B, 6mcb:A, 6mcc:A, 7s36:P, 7s38:P, 7s4x:A, 7v59:B, 7v59:E, 5vw1:A, 5vzl:A, 8ye6:A, 8ye9:A, 7z4c:B, 7z4e:B, 7z4k:B, 4zt0:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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