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BioLiP
>protein
VTVPKDLYVVEYGSNMTIECKFIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQDAGV
YRCMISADYKRITVKVNA

The query sequence (length=98) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7tps:B 209 112 1.0000 0.4689 0.8750 3.98e-64 8alx:A, 7bea:A, 7bea:B, 7dy7:B, 7dy7:A, 9eo0:A, 9eo0:B, 9eo0:C, 9eo0:F, 9eo0:D, 9eo0:E, 9ery:A, 9ery:B, 5j89:C, 5j89:D, 5j89:A, 5j89:B, 5j8o:A, 5j8o:B, 8jba:A, 8jba:B, 8k5n:A, 8k5n:B, 5n2d:A, 5n2d:B, 5n2d:C, 5n2d:D, 5n2f:A, 5n2f:B, 5niu:A, 5niu:B, 5niu:C, 5niu:D, 7nld:A, 7nld:B, 7nld:C, 7nld:D, 7nld:E, 6nm7:A, 6nm7:B, 6nm8:A, 6nm8:B, 6nnv:B, 6nnv:C, 6nnv:A, 6nnv:D, 6noj:A, 6noj:B, 6nos:A, 6nos:B, 5o45:A, 5o4y:E, 5o4y:B, 5o4y:C, 8or1:A, 8or1:B, 7oun:A, 8p1o:A, 8p1o:B, 8p64:A, 8p64:B, 6pv9:A, 6r3k:A, 6r3k:B, 6r3k:C, 6r3k:D, 8r6q:A, 8r6q:B, 6rpg:A, 6rpg:B, 7ux5:A, 7ux5:C, 7ux5:E, 7ux5:I, 7ux5:G, 7ux5:K, 7uxo:A, 7uxp:A, 7uxp:B, 7uxq:A, 7uxq:B, 6vqn:A, 6vqn:B, 6vqn:C, 7vun:C, 7vun:E, 7vun:D, 7vun:G, 7vun:F, 7vun:B, 7vun:H, 7xyq:A, 6ycr:A
2 4gos:A 115 51 0.2041 0.1739 0.3922 1.10e-08
3 4jkw:A 119 70 0.2347 0.1933 0.3286 6.28e-05 4k55:A
4 1u9k:A 110 82 0.2245 0.2000 0.2683 0.005 1u9k:B
5 7ndt:JJJ 241 87 0.2551 0.1037 0.2874 0.016 2esv:E, 7ndt:EEE
6 6s9f:B 300 64 0.2143 0.0700 0.3281 0.055 6s9f:A
7 6eg1:A 220 105 0.2755 0.1227 0.2571 0.20 6eg1:C
8 3kaa:B 109 93 0.2551 0.2294 0.2688 0.23
9 6c6q:F 113 92 0.2245 0.1947 0.2391 0.29 6c6q:D, 6c74:A, 6e47:F, 6e47:G, 6e48:G, 6e48:F
10 6fey:B 207 79 0.2041 0.0966 0.2532 0.43 6fey:A
11 6dcw:H 223 99 0.2653 0.1166 0.2626 0.56 6gk7:H
12 7qt0:E 217 89 0.2041 0.0922 0.2247 0.65 7qt0:A, 7qt0:C, 7qt0:G, 7qt0:I, 7qt0:K, 7qt3:A, 7qt3:C, 7qt4:A
13 6eg1:B 295 77 0.2653 0.0881 0.3377 0.78
14 8g8c:A 226 22 0.1122 0.0487 0.5000 0.99 8g8c:H
15 7m3y:B 109 90 0.2143 0.1927 0.2333 1.0 6dhb:A, 7m3z:A, 7m41:A, 7m41:B
16 7sjp:H 221 55 0.1633 0.0724 0.2909 1.2
17 8rtw:B 218 40 0.1327 0.0596 0.3250 1.2 8rtw:D
18 6fey:C 124 33 0.1020 0.0806 0.3030 1.2
19 7vp8:A 168 51 0.1531 0.0893 0.2941 1.4
20 4x8x:B 393 34 0.1224 0.0305 0.3529 1.9 4x8x:A, 4x9f:A
21 4x8x:B 393 43 0.1224 0.0305 0.2791 5.1 4x8x:A, 4x9f:A
22 4xb8:A 391 34 0.1224 0.0307 0.3529 2.1 4xb8:B
23 4xb8:A 391 43 0.1224 0.0307 0.2791 4.7 4xb8:B
24 5vh4:A 220 57 0.1837 0.0818 0.3158 2.1
25 6mnq:L 219 42 0.1327 0.0594 0.3095 2.3 6p7h:B
26 1rpq:D 167 19 0.0816 0.0479 0.4211 2.3 1rpq:A, 1rpq:B, 1rpq:C
27 7ok5:A 582 22 0.1122 0.0189 0.5000 2.3 7ok5:B
28 3mj9:A 229 44 0.1327 0.0568 0.2955 2.4
29 3mj9:A 229 36 0.1224 0.0524 0.3333 4.2
30 4bqf:B 827 52 0.1837 0.0218 0.3462 2.6 4bqe:A, 4bqe:B, 4bqf:A, 4bqi:A, 4bqi:B
31 7t74:H 130 49 0.1531 0.1154 0.3061 2.7
32 6mar:L 114 24 0.1020 0.0877 0.4167 3.5 5fuu:N, 6mar:N, 6olp:I, 6vpx:Q
33 2iep:A 187 37 0.1327 0.0695 0.3514 3.6 2iep:B
34 1sbs:H 222 99 0.2143 0.0946 0.2121 4.1 5b6f:B, 5b6f:D, 5b6f:F, 5b6f:H, 6kx1:A, 1sm3:H
35 6cqr:E 245 40 0.1224 0.0490 0.3000 4.6 6cql:E, 6cqn:E, 6cqq:E, 6cqq:J, 6cqr:J, 8trl:J, 8trl:H
36 3w15:A 336 44 0.1020 0.0298 0.2273 5.4
37 7r04:A 2326 35 0.1224 0.0052 0.3429 5.5
38 5uty:H 232 59 0.1735 0.0733 0.2881 5.6 9ber:H, 5d9q:H, 5d9q:F, 5d9q:N, 5fyl:H, 7lx2:H, 7lx2:N, 7lx2:P, 7lx3:H, 7lx3:N, 7lx3:P, 7lxm:H, 7lxm:N, 7lxm:P, 7lxn:H, 7lxn:I, 7lxn:J, 6ot1:m, 6ot1:F, 6ot1:Q, 4tvp:H, 6vlr:C
39 7pgr:N 2423 35 0.1224 0.0050 0.3429 5.7 2d4q:A, 2d4q:B, 2e2x:B, 3p7z:B, 3pg7:B, 7pgq:F, 7pgr:F, 7pgs:F, 7pgt:F, 7pgu:F, 7pgu:N
40 5cjx:H 227 94 0.2041 0.0881 0.2128 5.9 5c7k:E, 5cjx:A, 5cjx:D, 6cm3:P, 6cm3:R, 6cm3:T, 8czz:C, 8czz:G, 8czz:K, 8dok:C, 8dok:G, 8dok:K, 6edu:P, 6edu:T, 8g6u:C, 8g6u:G, 8g6u:K, 8gpi:D, 8gpi:H, 8gpi:A, 8gpj:D, 8gpj:H, 8gpj:A, 5js9:E, 5jsa:E, 7kde:S, 7kde:Q, 7kde:O, 7mxe:H, 7mxe:A, 7mxe:M, 6nqd:C, 6nqd:G, 6nqd:K, 4p9h:H, 5thr:T, 5thr:R, 8ttw:C, 8ttw:G, 8ttw:K, 5viy:K, 5viy:O
41 2ajs:L 216 42 0.1429 0.0648 0.3333 6.0 2ajv:L, 2ajx:L, 2ajy:L, 2ajz:L, 2ajz:A, 2ak1:L, 6p8d:E, 6p8d:B, 8s4h:B, 8s4h:D, 8s4h:L, 8s4k:L
42 6joo:A 834 25 0.1224 0.0144 0.4800 6.2
43 7deo:A 241 36 0.1327 0.0539 0.3611 6.9 7deo:C
44 4edq:A 483 23 0.1122 0.0228 0.4783 7.3 4edq:B
45 5jzi:D 207 78 0.2245 0.1063 0.2821 8.6 8gom:D, 8gon:D, 5jhd:D, 5jhd:I, 5jzi:I, 5yxn:A, 5yxu:A
46 6dcq:M 135 87 0.2041 0.1481 0.2299 8.9 6dcq:H, 5fuu:M, 5fuu:H, 6mar:H, 6mar:M, 6olp:G, 6olp:H, 6vpx:P
47 3qg6:B 209 43 0.1327 0.0622 0.3023 9.2 3qg6:H
48 4nfd:A 120 101 0.2449 0.2000 0.2376 9.2 3wv0:A, 3wv0:B, 5xo2:A, 5xo2:B, 5xof:A, 5xof:C, 5xof:B, 5xof:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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