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BioLiP
>protein
VEVEHWNTLRLRIYIGENDKWEGRPLYKVIVEKLREMGIAGATVYRGIYGFGTDLPIIVEVVDRGHNIEKVVNVIKPMIK
DGMITVEPTIVLWVGTQEE

The query sequence (length=99) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2dcl:A 99 99 1.0000 1.0000 1.0000 5.77e-67 2dcl:C, 2dcl:B
2 1o51:A 89 75 0.3434 0.3820 0.4533 7.39e-17
3 4j6o:A 261 66 0.1919 0.0728 0.2879 0.59 4j6o:B
4 8e2l:C 461 77 0.1515 0.0325 0.1948 2.2 8e2l:A, 8e2l:B, 8e2l:D, 8e2l:E, 8e2l:F
5 2eg2:A 95 44 0.1818 0.1895 0.4091 2.7
6 6sli:A 482 57 0.1717 0.0353 0.2982 3.2 5cx8:A, 5cx8:B, 6sli:C, 6sli:F, 6sli:I, 6slj:D, 6slj:C, 6sln:C, 6sln:D, 6sm3:A, 6smq:A
7 6csc:A 437 69 0.1515 0.0343 0.2174 3.6 1al6:A, 1amz:A, 1csc:A, 1csh:A, 1csi:A, 1csr:A, 1css:A, 2csc:A, 3csc:A, 4csc:A, 6csc:B, 2cts:A, 3cts:A, 4cts:A, 4cts:B, 5cts:A, 6cts:A, 3enj:A, 5uzp:A, 5uzp:B
8 5ups:A 520 66 0.1414 0.0269 0.2121 4.3 5upq:A, 5upq:B, 5ups:B, 5upt:A
9 4l2a:A 192 48 0.1212 0.0625 0.2500 6.6 4l2a:B, 4l2b:A, 4l2b:B, 4l2c:A, 4l2c:B, 4l2c:D, 4l2c:C, 4l2d:A, 4l2d:D, 4l2d:C, 4l2d:B, 3lio:A, 3lio:B, 3lj9:B, 3lj9:A, 3ljf:A, 3ljf:C, 3ljf:B, 3ljf:D
10 6gqi:A 529 72 0.2020 0.0378 0.2778 7.5 6gqi:B, 5m0z:A, 5m10:A, 7v8o:A, 7v8o:B, 7v8r:A, 7v8s:A, 7v8s:B
11 3avt:A 1203 28 0.1313 0.0108 0.4643 7.6 7abz:6, 5afi:z, 3agp:A, 3agq:A, 3avu:A, 3avv:A, 3avw:A, 3avx:A, 3avy:A, 7bbn:A, 7bbn:B, 2bvn:A, 2bvn:B, 1efm:A, 1etu:A, 4fwt:A, 2hcj:A, 2hcj:B, 2hdn:A, 2hdn:B, 2hdn:C, 2hdn:D, 2hdn:E, 2hdn:F, 2hdn:G, 2hdn:H, 2hdn:I, 2hdn:J, 2hdn:K, 2hdn:L, 5i4r:C, 5i4r:D, 5i4r:G, 5i4r:H, 3mmp:G, 5opd:A, 5opd:B, 4pc2:A, 4pc2:B, 4pc3:A, 4pc3:B, 4pc6:A, 4pc6:B, 4pc7:A, 3u6b:B, 3u6b:A, 3vnu:A, 3vnv:A, 6wd4:8, 6wd7:8, 6wd9:8, 6wda:8
12 3x0y:A 402 31 0.1313 0.0323 0.4194 8.1 3x0y:F, 3x0y:C, 3x0y:E, 3x0y:B, 3x0y:D
13 4yn3:A 596 39 0.1313 0.0218 0.3333 9.2 3vta:A, 3vta:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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