BioLiP

>protein
TSGVLLESQTKITDGALHFDGKKLNHNTFENPSKSQYDYFFGRNISAHGDAVKPYKHFVFMTWYKGGKEERNVMLSRFNT
KTGVVKTIQFPHRHTGFRGDPLVGESHNTIGLAVSPLNGTIHMVYDMHAYVDDDETGRFKGRFVDDFFRYSFSVAGAADV
PDDEFTLEQFVKDTSELSQGADDYKHLTMTGNLQDKENFSALTYPKFYTSDDGELLHYMNWGGNNNGAYYFNKYDAKNQK
WTRFTPFNHKDQKTHGNAYNWGLYGQMKYINGKLRVGFQQRSANNDDRFKYQNGVYYAYSDHPDGLGNWKNVDGEDMTWP
LVNSDEIKIFEPGDYIDHTAPNSVHIVTGFDWTVTENDDVHFITHVRSTDTKRSDYKEVSIHAFKPANAVDFTITTDFTG
ADSIYTSGDSIFIIGLKNGYPFVEKAKGGSNDFEVVYQQASGVKFDHGTIHIENGKAYYYLMEKGAGNALPLHLQVIDLG
V

The query sequence (length=481) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	6jq9:B	483	482	0.9979	0.9938	0.9959	0.0	6byp:A, 6byp:B, 6byt:A, 6byt:B, 6byx:A, 6byx:B, 6jq9:A
2	7czh:A	481	485	0.5052	0.5052	0.5010	2.35e-157	7czh:B, 7drq:A, 7drq:B
3	7esn:A	435	229	0.1351	0.1494	0.2838	5.91e-08	7esk:A, 7esm:A, 8i4d:A, 7yqs:A
4	5mul:A	378	180	0.0915	0.1164	0.2444	4.70e-04
5	6npl:A	861	60	0.0416	0.0232	0.3333	0.65	6nph:A, 6nph:B, 6npl:B
6	5vpn:E	585	45	0.0374	0.0308	0.4000	2.1	6awf:A, 2b76:A, 2b76:M, 1kf6:A, 1kf6:M, 1kfy:A, 1kfy:M, 4kx6:A, 4kx6:M, 1l0v:A, 1l0v:M, 3p4p:A, 3p4p:M, 3p4q:A, 3p4q:M, 3p4r:A, 3p4r:M, 3p4s:A, 3p4s:M, 5vpn:A
7	7ook:C	373	110	0.0582	0.0751	0.2545	3.3	7ook:B, 7ook:A
8	6b58:C	544	42	0.0353	0.0312	0.4048	4.8	6b58:A
9	6awf:E	487	42	0.0353	0.0349	0.4048	5.2
10	3cir:A	541	42	0.0353	0.0314	0.4048	6.0
11	8isq:A	261	50	0.0312	0.0575	0.3000	8.2	8isp:A, 8isr:A, 8isr:B

[Back]