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BioLiP
>protein
TIGMFNEEGENVDLYIPRKCHATTTLIEAHDHAAVQISIANVGPNGVINGTTTTLCIAGYLRSQGESDHAINHITIDRGI
MRIKTGKP

The query sequence (length=88) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6az1:Y 88 88 0.9886 0.9886 0.9886 7.67e-61 8rxh:SY, 8rxx:SY
2 8ova:AR 89 87 0.7841 0.7753 0.7931 2.33e-47
3 7ase:g 83 83 0.7045 0.7470 0.7470 4.25e-43
4 4v3p:ST 82 75 0.4205 0.4512 0.4933 3.83e-24
5 8r6f:V 81 71 0.3977 0.4321 0.4930 1.17e-22 8ip8:cb, 8ip9:cb, 8ipa:cb
6 7qix:L 82 71 0.3750 0.4024 0.4648 6.87e-22 7qiz:BA
7 8bqd:a 87 80 0.4091 0.4138 0.4500 1.37e-21 8bn3:D1, 8bqx:a, 8c83:a, 8cah:a, 8ccs:x, 8cf5:x, 8cku:x, 8cmj:x, 5dat:d1, 5dge:d1, 5dgv:d1, 6eml:a, 8eub:BV, 8evp:BV, 8evq:BV, 8evr:BV, 8evs:BV, 8evt:BV, 8ewb:BV, 8ewc:BV, 6fai:V, 6fyy:V, 6gq1:AL, 6gqv:AL, 6gsm:V, 6gsn:V, 8i7j:V, 5it7:V, 5it9:V, 3j77:21, 3j78:21, 3j80:V, 5juu:SB, 8k2d:SV, 8k82:SV, 5m1j:V2, 7mpi:BV, 7mpj:BV, 7n8b:BV, 5ndv:d1, 7nrd:Sa, 5obm:d1, 7osa:eS21, 7osm:eS21, 6q8y:a, 6rbd:V, 6rbe:V, 8rw1:V, 6s47:BW, 8s8d:V, 8s8e:V, 8s8f:V, 8s8i:V, 6snt:V, 6sv4:a, 6t4q:SV, 6t7t:SV, 6tnu:a, 4u3n:D1, 4u4n:D1, 4u4o:D1, 4u4y:D1, 4u50:d1, 4u53:D1, 4v6i:AT, 4v8y:AV, 4v8z:AV, 4v92:BV, 6xiq:AL, 6xir:AL, 6z6j:SV, 6z6k:SV, 7zrs:AV, 7zux:DV
8 8c3a:X 87 80 0.4091 0.4138 0.4500 1.53e-21 8c3a:DI, 8cq7:X, 8cq7:DI, 8cqw:X, 8cqw:DI, 8cre:X, 8cre:DI, 8oeq:X, 8oeq:DI, 7pzy:W, 7q08:W, 7q0f:W, 7q0p:W, 7q0r:W, 8q5i:W
9 8auv:G 83 78 0.3864 0.4096 0.4359 3.72e-21 8b2l:G1
10 4bts:AZ 97 82 0.3750 0.3402 0.4024 3.95e-19 4bts:BZ, 4bts:CZ, 4bts:DZ, 4v5o:AZ, 4v5o:BZ
11 3j7a:Z 72 71 0.3636 0.4444 0.4507 4.93e-19 3jbn:Z, 3jbp:Z, 6okk:Z, 8tpu:SZ
12 5xxu:V 80 78 0.3977 0.4375 0.4487 8.15e-19
13 7syl:W 83 79 0.3977 0.4217 0.4430 3.65e-17 6gz3:BV, 6olz:BV, 6om0:SV, 6om7:SV, 7oyb:V2, 7tor:AS21, 7wtw:V, 7wtz:V
14 6xu8:AV 82 79 0.3750 0.4024 0.4177 1.02e-15
15 2ijd:1 644 54 0.1818 0.0248 0.2963 1.1 4dcd:A, 2ijd:2, 2ily:A, 2ilz:A, 2im0:A, 2im1:A, 2im2:A, 2im3:A, 4k4s:A, 4k4s:E, 4k4t:A, 4k4t:E, 4k4u:A, 4k4u:E, 4k4v:A, 4k4v:E, 4k4w:A, 4k4w:E, 3ol6:A, 3ol6:E, 3ol6:I, 3ol6:M, 3ol7:A, 3ol7:E, 3ol7:I, 3ol7:M, 3ol8:A, 3ol8:E, 3ol8:I, 3ol8:M, 3ol9:A, 3ol9:E, 3ol9:I, 3ol9:M, 3ola:A, 3ola:E, 3ola:I, 3ola:M, 3olb:A, 3olb:E, 3olb:I, 3olb:M, 1ra7:A
16 2v27:B 272 21 0.1136 0.0368 0.4762 1.8 2v27:A
17 5x9u:A 494 42 0.1818 0.0324 0.3810 3.0 5x9u:B, 5x9u:C, 5x9u:D, 5x9v:A, 5x9v:B, 5x9v:C, 5x9v:D
18 6ku8:A 177 75 0.2273 0.1130 0.2667 4.1
19 3zv9:A 188 63 0.2045 0.0957 0.2857 4.9 9ax9:A, 7gnv:B, 7gnw:A, 7gnx:A, 7gny:B, 7gnz:A, 7gnz:B, 7go0:B, 7go1:A, 7go1:B, 7go2:A, 7go3:A, 7go3:B, 7go4:B, 7go5:A, 7go5:B, 7go6:A, 7go6:B, 7go7:B, 7go8:A, 7go9:A, 7goa:B, 7gob:B, 7goc:B, 7god:B, 7goe:B, 7gof:B, 7gog:B, 7goh:A, 7goh:B, 7goi:A, 7goj:A, 7goj:B, 7gok:A, 7gok:B, 7gol:A, 7gom:B, 7gon:B, 7goo:A, 7goo:B, 7gop:B, 7goq:A, 7gor:A, 7gos:A, 7gos:B, 7got:B, 7gou:A, 7gou:B, 7gov:B, 7gow:A, 7gox:A, 7goy:A, 7goz:B, 7gp0:A, 7gp0:B, 7gp1:B, 7gp2:A, 7gp3:A, 7gp4:A, 7gp4:B, 7gp5:B, 7gp6:B, 7gp7:A, 7gp8:B, 7gp9:A, 7gpa:B, 7gpc:B, 7gpd:B, 7gpe:A, 7gpf:A, 7gpg:B, 7gph:B, 7gpi:B, 7gpj:B, 7gpk:B, 7gpl:A, 7gpm:B, 7gpn:A, 7gpo:B, 7gpp:A, 7gpq:A, 7gpr:A, 7gps:B, 7gpt:A, 7gpu:A, 7gpu:B, 7gpv:B, 7gpw:A, 7gpw:B, 7gpx:B, 7gpy:A, 7gpy:B, 7gpz:B, 7gq0:B, 7gq1:A, 7gq1:B, 7gq2:A, 7gq3:B, 7gq4:A, 7gq5:A, 7gq5:B, 7gq6:B, 7gq7:A, 7gq8:A, 7gq8:B, 7gq9:A, 7gqa:B, 7gqb:B, 7gqc:A, 7gqc:B, 7gqd:B, 7gqe:B, 7gqf:A, 7gqg:B, 7gqh:A, 7gqi:A, 7gqj:A, 7gqj:B, 7gqk:B, 7gql:A, 7gql:B, 7gqm:A, 7gqn:A, 7gqn:B, 7gqo:B, 7gqp:A, 7gqq:B, 7gqr:B, 7l8h:A, 7l8h:B, 3zva:A, 3zvb:A, 3zvc:A, 3zvd:A, 3zve:A, 3zvf:A, 3zvg:A
20 6uek:A 660 22 0.1136 0.0152 0.4545 6.2 6uek:B, 6uek:C
21 6uek:D 585 22 0.1136 0.0171 0.4545 6.7
22 1e5d:A 401 62 0.2045 0.0449 0.2903 8.2 1e5d:B
23 5l6i:A 1007 39 0.1364 0.0119 0.3077 8.6 3cmm:A, 3cmm:C, 5l6h:A, 5l6h:C, 5l6i:C, 5l6j:A, 5l6j:C, 4nnj:A, 4nnj:C, 6nya:A, 6nya:D, 6zhu:A, 6zhu:E, 6zhu:C, 6zhu:G, 7zh9:A
24 2p4q:A 476 33 0.1136 0.0210 0.3030 9.4

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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