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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
>protein
TGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPVNKDRYISKMFLRGDSVIVVLRNPL

The query sequence (length=78) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 8y6o:q 104 80 1.0000 0.7500 0.9750 1.39e-51 7a5p:h, 7abg:a, 7abi:a, 6ah0:k, 6ah0:P, 6ahd:P, 6ahd:k, 8ch6:l, 8ch6:4, 7dvq:k, 8h6e:2c, 8h6j:2c, 8h6k:4c, 8h6k:2c, 8h6l:4c, 8h6l:2c, 8i0w:k, 6id0:k, 6id1:k, 5o9z:h, 5o9z:a, 4pjo:R, 7qtt:l, 8qzs:42, 7w59:k, 7w5a:k, 7w5b:k, 5xjc:k, 8y7e:k, 5yzg:k, 5z56:k, 5z57:k, 5z58:k
2 4wzj:KK 104 89 1.0000 0.7500 0.8764 3.82e-50 7abg:h, 7abi:h, 6ahd:c, 7b0y:e, 8c6j:m, 8c6j:a, 7evo:a, 9fmd:k, 9fmd:d, 8h6e:5c, 8h6e:4c, 8h6j:5c, 8h6j:4c, 8h6k:5c, 8h6l:5c, 8hk1:a, 8i0p:c, 8i0p:h, 8i0r:c, 8i0r:h, 8i0s:c, 8i0s:h, 8i0t:h, 8i0u:c, 8i0u:h, 8i0v:c, 8i0v:h, 8i0w:c, 6icz:d, 6id0:d, 6id1:d, 5mqf:h, 5mqf:a, 4pjo:D, 4pjo:d, 4pjo:r, 8q7q:c, 8q7v:c, 8q7w:c, 8q7x:c, 8q91:j, 6qdv:m, 6qdv:j, 8qo9:22, 8qo9:52, 8qo9:42, 6qw6:42, 6qw6:52, 6qx9:12, 6qx9:52, 6qx9:22, 6qx9:42, 8qxd:22, 8qxd:42, 8qxd:52, 8qzs:52, 8qzs:22, 8r08:12, 8r08:42, 8r08:22, 8r08:52, 8r09:22, 8r09:52, 8r09:42, 8r0a:52, 8r0a:42, 8r0a:22, 8r0b:22, 8r0b:42, 8r0b:52, 8rc0:j, 8rm5:22, 8rm5:52, 8rm5:42, 8ro2:d, 7vpx:a, 7vpx:i, 7w59:d, 7w5a:d, 7w5b:d, 4wzj:D, 4wzj:K, 4wzj:R, 4wzj:DD, 4wzj:RR, 4wzj:DDD, 4wzj:KKK, 4wzj:RRR, 4wzj:DDDD, 4wzj:KKKK, 4wzj:RRRR, 5xjc:d, 6y53:h, 6y5q:h, 8y6o:c, 8y6o:j, 5yzg:d, 5z56:d, 5z57:d, 5z58:d
3 8ro0:d 94 77 0.8590 0.7128 0.8701 1.37e-44 8ro1:d
4 3jb9:G 95 85 0.7821 0.6421 0.7176 5.68e-39 3jb9:l
5 6n7p:M 107 80 0.6154 0.4486 0.6000 8.29e-31 7b9v:m, 7b9v:j, 6bk8:a, 7dco:n, 6exn:m, 6exn:j, 6g90:i, 6g90:u, 5gam:j, 5gan:m, 5gan:j, 5gao:m, 5gm6:g, 5gmk:g, 5gmk:e, 6j6g:g, 6j6g:e, 6j6h:g, 6j6h:e, 6j6n:g, 6j6n:e, 6j6q:g, 6j6q:e, 3jcm:Q, 3jcm:U, 5lj3:j, 5lj3:m, 5lj5:j, 5lj5:m, 5mps:j, 5mq0:j, 6n7r:M, 6n7x:M, 5nrl:u, 5nrl:m, 5nrl:i, 7oqb:u, 7oqc:i, 7oqe:i, 7oqe:u, 8w2o:M, 5wsg:g, 5wsg:W, 5y88:g, 5y88:n, 5ylz:g, 5ylz:n, 5zwm:R, 5zwm:c, 5zwm:n, 5zwn:c, 5zwo:c, 5zwo:R, 5zwo:n
6 6qw6:63 85 81 0.3205 0.2941 0.3086 8.51e-11 6ah0:r, 6qx9:63, 8qxd:63, 8r08:63, 8r09:63, 8r0a:63, 8r0b:63, 8rm5:63
7 6ppn:C 75 73 0.3205 0.3333 0.3425 4.83e-08 6ppn:K, 6ppp:C, 6ppp:K, 6ppq:C, 6ppv:C
8 5mkn:d 72 71 0.3077 0.3333 0.3380 1.30e-07 5mki:C, 5mki:D, 5mki:E, 5mki:F, 5mki:G, 5mki:I, 5mki:J, 5mki:K, 5mki:L, 5mkn:A, 5mkn:G, 5mkn:B, 5mkn:C, 5mkn:D, 5mkn:E, 5mkn:F, 5mkn:H, 5mkn:I, 5mkn:J, 5mkn:K, 5mkn:L, 5mkn:M, 5mkn:N, 5mkn:O, 5mkn:P, 5mkn:Q, 5mkn:R, 5mkn:T, 5mkn:U, 5mkn:V, 5mkn:W, 5mkn:X, 5mkn:Y, 5mkn:Z, 5mkn:a, 5mkn:b
9 5vsu:C 81 64 0.2692 0.2593 0.3281 2.20e-07 6aso:C, 4c8q:C, 5gan:3, 4m7a:J, 4m7a:C, 4m7d:J, 4m7d:C, 5nrl:3
10 1loj:C 77 77 0.3077 0.3117 0.3117 1.55e-06 1loj:A, 1loj:B, 1loj:D, 1loj:E, 1loj:F, 1loj:G, 1loj:H, 1loj:I, 1loj:J, 1loj:K, 1loj:L, 1loj:M, 1loj:N
11 6v4x:D 106 75 0.2949 0.2170 0.3067 1.40e-05
12 1i5l:C 74 75 0.2821 0.2973 0.2933 2.88e-05 1i5l:E, 1i5l:F, 1i5l:G, 1i5l:J, 1i5l:K, 1i5l:L, 1i5l:A, 1i5l:B, 1i5l:H
13 6exn:r 75 58 0.2051 0.2133 0.2759 1.43e-04 7b9v:r, 7b9v:g, 6bk8:d, 7dco:k, 6exn:g, 6g90:g, 6g90:y, 5gam:g, 5gan:r, 5gan:g, 5gao:r, 5gm6:j, 5gmk:j, 5gmk:x, 6j6g:j, 6j6g:x, 6j6h:j, 6j6h:x, 6j6n:j, 6j6n:x, 6j6q:j, 6j6q:x, 5lj3:g, 5lj5:g, 5mps:g, 5mq0:g, 6n7p:Q, 6n7r:Q, 6n7x:Q, 5nrl:y, 5nrl:r, 5nrl:g, 7oqb:y, 7oqc:g, 7oqe:y, 8w2o:Q, 5wsg:j, 5wsg:K, 5y88:d, 5y88:k, 5ylz:d, 5ylz:k, 5zwm:V, 5zwm:k, 5zwn:g, 5zwo:k
14 1lnx:A 74 59 0.2179 0.2297 0.2881 2.57e-04 1lnx:B, 1lnx:C, 1lnx:D, 1lnx:E, 1lnx:F, 1lnx:G
15 1m8v:A 72 71 0.3077 0.3333 0.3380 7.11e-04 1m8v:M, 1m8v:C, 1m8v:K, 1m8v:F, 1m8v:H, 1m8v:E, 1m8v:I, 1m8v:D, 1m8v:J, 1m8v:B, 1m8v:L, 1m8v:G, 1m8v:N
16 3swn:A 76 72 0.2308 0.2368 0.2500 0.011 6ppq:E, 6ppv:E, 3swn:D, 3swn:P, 3swn:S
17 6bk8:f 80 60 0.2564 0.2500 0.3333 0.012 6bk8:k, 7dco:a, 7dco:h, 6exn:k, 6exn:b, 6g90:s, 5gam:b, 5gan:k, 5gan:b, 5gao:k, 5gm6:k, 5gmk:k, 5gmk:s, 3jcm:S, 5lj3:b, 5lj5:b, 5mps:b, 5mq0:k, 5mq0:b, 5nrl:s, 5nrl:k, 5nrl:b, 7oqb:s, 7oqe:s, 5wsg:k, 5wsg:F, 5y88:a, 5y88:h, 5ylz:a, 5ylz:h, 5zwm:P, 5zwm:a, 5zwm:h, 5zwo:a, 5zwo:P
18 7abg:j 81 73 0.2051 0.1975 0.2192 0.025 7a5p:j, 7a5p:e, 7abi:j, 6ah0:c, 6ahd:e, 7b0y:g, 8c6j:p, 8c6j:e, 8ch6:i, 8ch6:1, 7dvq:e, 7dvq:l, 9fmd:l, 9fmd:e, 8h6e:5e, 8h6e:4e, 8h6j:5e, 8h6j:4e, 8h6k:5e, 8h6l:5e, 8i0p:e, 8i0p:j, 8i0r:e, 8i0r:j, 8i0s:e, 8i0s:j, 8i0t:e, 8i0t:j, 8i0u:e, 8i0u:j, 8i0v:e, 8i0v:j, 8i0w:e, 8i0w:l, 6icz:e, 6id0:e, 6id1:e, 5mqf:j, 5mqf:c, 5o9z:j, 4pjo:E, 4pjo:e, 4pjo:S, 4pjo:s, 8q7q:e, 8q7v:e, 8q7w:e, 8q7x:e, 6qdv:p, 6qdv:e, 8qo9:2e, 8qo9:5e, 8qo9:4e, 7qtt:i, 6qw6:4e, 6qw6:5e, 6qx9:1e, 6qx9:5e, 6qx9:2e, 6qx9:4e, 8qxd:2e, 8qxd:4e, 8qzs:5e, 8qzs:2e, 8qzs:4e, 8r08:1e, 8r08:2e, 8r08:4e, 8r09:2e, 8r09:5e, 8r09:4e, 8r0a:5e, 8r0a:2e, 8r0a:4e, 8r0b:4e, 8r0b:5e, 8rm5:2e, 8rm5:5e, 8rm5:4e, 8ro2:e, 6v4x:E, 7vpx:l, 7w59:e, 7w59:l, 7w5a:e, 7w5a:l, 7w5b:e, 7w5b:l, 4wzj:E, 4wzj:L, 4wzj:S, 4wzj:EE, 4wzj:LL, 4wzj:SS, 4wzj:EEE, 4wzj:LLL, 4wzj:SSS, 4wzj:EEEE, 4wzj:LLLL, 4wzj:SSSS, 5xjc:e, 5xjc:l, 8y6o:e, 8y6o:l, 8y6o:s, 8y7e:l, 5yzg:e, 5yzg:l, 5z56:e, 5z56:l, 5z57:e, 5z57:l, 5z58:e, 5z58:l
19 6ppq:A 69 66 0.2179 0.2464 0.2576 0.027 6ppv:A
20 6tfl:A 62 42 0.1538 0.1935 0.2857 0.028 6tfl:B, 6tfl:C, 6tfl:D, 6tfl:E, 6tfl:F, 6tfl:G, 6tfl:H, 6tfl:I, 6tfl:J, 6tfl:K, 6tfl:L, 6tfl:M, 6tfl:N
21 8ro0:b 98 58 0.1795 0.1429 0.2414 0.040 8ro1:b
22 3jb9:H 76 73 0.2051 0.2105 0.2192 0.044 3jb9:m
23 3jb9:E 98 53 0.1667 0.1327 0.2453 0.081 3jb9:b
24 7b9v:p 77 45 0.1667 0.1688 0.2889 0.14 7b9v:e, 6bk8:c, 7dco:i, 6exn:p, 6exn:e, 6g90:e, 6g90:w, 5gan:p, 5gao:p, 5gm6:i, 5gmk:i, 5gmk:u, 6j6g:i, 6j6g:u, 6j6h:i, 6j6h:u, 6j6n:i, 6j6n:u, 6j6q:i, 6j6q:u, 5mps:e, 5mq0:e, 6n7p:O, 6n7r:O, 6n7x:O, 5nrl:w, 5nrl:p, 5nrl:e, 7oqb:w, 7oqc:e, 7oqe:w, 8w2o:O, 5wsg:i, 5wsg:G, 5y88:b, 5y88:i, 5ylz:b, 5ylz:i, 5zwm:T, 5zwm:i, 5zwn:e, 5zwo:T, 5zwo:i
25 6v4x:B 76 70 0.2051 0.2105 0.2286 0.15
26 7w59:b 102 57 0.1923 0.1471 0.2632 0.26 7abg:m, 7abi:m, 6ahd:a, 7b0y:j, 8c6j:b, 8ch6:8, 7dvq:i, 9fmd:i, 8h6e:5a, 8h6e:4a, 8h6j:5a, 8h6j:4a, 8h6k:5a, 8h6l:5a, 8i0p:a, 8i0p:m, 8i0r:a, 8i0r:m, 8i0s:m, 8i0t:a, 8i0t:m, 8i0u:m, 8i0v:a, 8i0v:m, 8i0w:a, 8i0w:i, 6icz:i, 4pjo:B, 4pjo:b, 4pjo:P, 4pjo:p, 8q7q:b, 8q7v:b, 8q7w:b, 8q7x:b, 8q91:h, 6qdv:k, 8qo9:5b, 8qo9:4b, 6qw6:4b, 6qw6:5b, 6qx9:1b, 6qx9:5b, 6qx9:2b, 6qx9:4b, 8qxd:4b, 8qxd:5b, 8qzs:5b, 8qzs:2b, 8r08:1b, 8r08:4b, 8r08:5b, 8r09:5b, 8r0a:5b, 8r0b:5b, 8rc0:h, 8rm5:2b, 8rm5:5b, 8ro2:b, 7vpx:k, 7w59:i, 7w5a:b, 7w5a:i, 7w5b:b, 7w5b:i, 4wzj:B, 5xjc:b, 5xjc:i, 8y6o:a, 8y6o:h, 8y6o:o, 8y7e:i, 5yzg:b, 5yzg:i, 5z56:b, 5z56:i, 5z57:b, 5z57:i, 5z58:b, 5z58:i
27 9fmd:b 87 50 0.1667 0.1494 0.2600 0.29 7a5p:m, 7a5p:b, 7abg:f, 7abi:f, 6ah0:U, 8ch6:n, 5o9z:f, 6qdv:b, 7qtt:n, 4wzj:I, 4wzj:P, 4wzj:BB, 4wzj:II, 4wzj:PP, 4wzj:BBB, 4wzj:III, 4wzj:PPP, 4wzj:BBBB, 4wzj:IIII, 4wzj:PPPP
28 6qw6:68 95 69 0.2051 0.1684 0.2319 0.30 6ahd:z, 8h6e:6g, 8h6j:6g, 8h6k:6g, 8h6l:6g, 6qx9:68, 8qxd:68, 8r08:68, 8r09:68, 8r0a:68, 8r0b:68, 8rm5:68
29 9ash:A 753 34 0.1410 0.0146 0.3235 0.31 9asi:A, 6xn3:A, 6xn4:A, 6xn5:A, 6xn7:A
30 6ppn:B 94 62 0.2051 0.1702 0.2581 1.2 6ppn:J, 6ppp:B, 6ppp:J, 6ppq:B, 6ppv:B
31 4gfh:A 1102 47 0.1795 0.0127 0.2979 1.2 4gfh:F, 3l4j:A, 3l4k:A, 1pvg:A, 1pvg:B, 1qzr:A, 1qzr:B, 2rgr:A
32 3ict:A 557 30 0.1538 0.0215 0.4000 2.4 3icr:A, 3icr:B, 3ics:A, 3ics:B, 3ict:B
33 4x1t:A 321 48 0.2051 0.0498 0.3333 4.0
34 1ukm:B 124 20 0.1410 0.0887 0.5500 5.4
35 6ppn:H 94 68 0.2179 0.1809 0.2500 6.4 6ppn:P, 6ppp:H, 6ppp:P
36 7po6:B 166 38 0.1538 0.0723 0.3158 6.9 8k2e:B, 8k2e:A, 7l4x:B, 7l4y:B, 2mtv:A, 7p87:A, 7p87:B, 7p88:A, 7p88:B, 7p8a:A, 7p8a:B, 7p8b:A, 7p8b:B, 7p8f:A, 7p8f:B, 7pj7:A, 7pj7:B, 7pj8:A, 7pj8:B, 7pj9:A, 7pj9:B, 7pja:A, 7pja:B, 7pjb:A, 7pjb:B, 7pjp:A, 7pjp:B, 7pjq:A, 7pjq:B, 7po6:A, 7po6:C, 8q2q:A, 8q2q:B, 8q2r:A, 8q2r:B, 8q2s:A, 8q2s:B, 8q2t:A, 8q2t:B, 8q2u:A, 8q2u:B, 8q2v:A, 8q2v:B, 8q2w:A, 8q2w:B, 8q2x:A, 8q2x:B, 8q2y:A, 8q2y:B, 8q31:A, 8q31:B, 8q32:A, 8q32:B, 8q33:A, 8q33:B, 8q35:A, 8q35:B, 8q37:A, 8q37:B, 8q38:A, 8q38:B, 8q39:A, 8q39:B, 8q3a:A, 8q3a:B, 8q3g:A, 8q3g:B, 8q4m:A, 8q4m:B, 8q4n:A, 8q4n:B, 8q4p:A, 8q4p:B, 8q4q:A, 8q4q:B, 8q4r:A, 8q4r:B, 8q4t:A, 8q4t:B, 8q4u:A, 8q4u:B, 8q4v:A, 8q4v:B, 8q4w:A, 8q4w:B, 4r3i:A, 6rt4:A, 6rt4:B, 6rt5:C, 6rt5:B, 6rt6:C, 6rt6:B, 6rt7:C, 6rt7:B, 6syz:A, 6syz:B, 6sz1:A, 6sz1:B, 6sz2:B, 6sz3:B, 6sz7:A, 6sz7:B, 6sz8:B, 6szl:B, 6szn:B, 6szr:B, 6szt:A, 6szt:B, 6szx:A, 6szx:B, 6szy:B, 6t01:A, 6t01:B, 6t02:A, 6t02:B, 6t03:A, 6t03:B, 6t04:B, 6t05:B, 6t05:A, 6t06:B, 6t07:B, 6t08:A, 6t08:B, 6t09:A, 6t09:B, 6t0a:A, 6t0a:B, 6t0c:A, 6t0c:B, 6t0d:A, 6t0d:B, 6t0o:A, 6t0o:B, 6t0x:A, 6t0x:B, 6t0z:A, 6t0z:B, 6t10:A, 6t10:B, 6t11:B, 6t12:A, 6t12:B, 6we9:A, 6we9:C, 6wea:A, 6wea:C, 6wea:B, 6wea:D, 6yke:B, 6yki:B, 6ykj:A, 6ykj:B, 6ykz:A, 6ykz:B, 6yl0:A, 6yl0:B, 6yl8:A, 6yl8:B, 6yl9:B, 6ym2:A, 6ym2:B, 6ym8:A, 6ym8:B, 6yni:B, 6ynj:A, 6ynj:B, 6ynk:A, 6ynk:B, 6ynl:B, 6ynm:B, 6ynn:A, 6ynn:B, 6yno:B, 6ynp:A, 6ynp:B, 6yoq:A, 6yoq:B, 6zcm:A, 6zcm:B, 6zcn:A, 6zcn:B, 6zd5:A, 6zd5:B, 6zd7:B, 6zd7:A, 6zda:A, 6zda:B
37 6n7r:K 124 32 0.1538 0.0968 0.3750 7.3 7b9v:k, 7b9v:b, 6g90:b, 6j6g:k, 6j6g:s, 6j6h:k, 6j6h:s, 6j6n:k, 6j6n:s, 6j6q:k, 6j6q:s, 6n7p:K, 6n7x:K, 7oqc:b, 7oqe:b, 8w2o:K, 5zwn:a
38 7ziu:B 606 23 0.0897 0.0116 0.3043 7.6 7ziu:A
39 3hsb:B 69 31 0.1667 0.1884 0.4194 9.9 3ahu:A, 3ahu:B, 3ahu:C, 3hsb:A, 3hsb:C, 3hsb:D, 3hsb:F

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417