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BioLiP
>protein
TDDLEVACPKCECPACSGKGVILTAQGYTLLDFIQKHLN

The query sequence (length=39) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 2zp9:C 46 42 1.0000 0.8478 0.9286 3.80e-22 2zp9:M, 2zp9:O, 2zp9:D, 2zp9:I, 2zp9:J
2 2bx9:A 53 48 1.0000 0.7358 0.8125 3.51e-21 2bx9:B, 2bx9:C, 2bx9:D, 2bx9:E, 2bx9:F, 2bx9:G, 2bx9:H, 2bx9:I, 2bx9:J, 2bx9:K, 2bx9:L, 2ko8:A, 2ko8:B, 2ko8:C, 2zp8:E, 2zp8:F, 2zp8:G, 2zp8:H, 2zp8:I, 2zp8:J, 2zp9:E
3 3lcz:A 53 48 0.7179 0.5283 0.5833 1.08e-12 3lcz:B, 3lcz:C, 3lcz:D, 3ld0:A, 3ld0:B, 3ld0:C, 3ld0:D, 3ld0:E, 3ld0:F, 3ld0:G, 3ld0:H, 3ld0:I, 3ld0:J, 3ld0:K, 3ld0:L, 3ld0:M, 3ld0:N, 3ld0:O, 3ld0:P, 3ld0:Q, 3ld0:R, 3ld0:S, 3ld0:T, 3ld0:U, 3ld0:V, 3ld0:W, 3ld0:X, 3ld0:Y, 3ld0:Z, 3ld0:1, 3ld0:2, 3ld0:3, 3ld0:4, 3ld0:5, 3ld0:6, 3ld0:7, 3ld0:8, 3ld0:9, 3ld0:a, 3ld0:b, 3ld0:c, 3ld0:d, 3ld0:e, 3ld0:f, 3ld0:g, 3ld0:h, 3ld0:i, 3ld0:j, 3ld0:k, 3ld0:l, 3ld0:m
4 6ryr:W 708 15 0.2308 0.0127 0.6000 0.14 2l75:A, 1mm2:A, 6q3m:D, 6ryu:W, 6ryu:V
5 6q3m:C 219 15 0.2308 0.0411 0.6000 0.37 6q3m:A, 6q3m:B
6 2atv:A 168 18 0.2564 0.0595 0.5556 0.45
7 8qkh:A 268 13 0.1795 0.0261 0.5385 0.62 8q01:S, 8qek:S, 8qgr:B
8 6j28:A 345 21 0.2308 0.0261 0.4286 1.7 6j27:A, 6j27:B, 6j27:C, 6j27:D, 6j28:C, 6j28:B, 6j28:D
9 6guu:B 204 15 0.2051 0.0392 0.5333 1.8 6guu:A
10 8asn:G 346 18 0.2051 0.0231 0.4444 2.3 8asn:H, 8asn:I, 5m7g:F
11 1mm3:A 61 17 0.2564 0.1639 0.5882 2.6
12 8ppt:B 1191 34 0.2821 0.0092 0.3235 4.5 8ppu:B, 8ppv:B, 6t8h:B
13 4m7x:A 273 20 0.2308 0.0330 0.4500 5.1 6avp:A, 6avp:C, 6avp:B, 6avp:D, 6awg:A, 6awg:B, 6awg:C, 6awg:D, 6awh:A, 6awh:B, 6awh:C, 6awh:D, 6awi:A, 6awi:B, 6awi:C, 6awi:D, 6awj:A, 6awj:B, 6awj:C, 6awj:D, 6ebv:A, 6ebv:B, 6ebv:C, 6ebv:D, 5elz:A, 2ews:A, 2ews:B, 5jic:A, 4m7y:A, 4m7y:B, 4nb4:A, 4nb4:B, 4nb4:C, 4nb4:D, 4nb4:E, 4nb4:F, 4nb4:G, 4nb4:H
14 6knb:B 1120 34 0.2821 0.0098 0.3235 5.5 6knc:B
15 7b0n:E 216 25 0.2051 0.0370 0.3200 5.5 6gcs:H, 7o6y:H, 7o71:H, 6rfq:H, 6rfr:H, 6rfs:H, 6y79:H, 6yj4:E
16 5zmm:D 489 30 0.2821 0.0225 0.3667 5.6
17 5zmm:A 530 30 0.2821 0.0208 0.3667 5.6 5zmm:B, 5zmm:C, 5zmm:E, 5zmm:F, 5zmn:A, 5zmo:A
18 4i4t:F 357 20 0.1795 0.0196 0.3500 6.5 8a0l:F, 7au5:F, 8b7a:F, 8b7c:F, 8bde:F, 5bmv:F, 8c0f:F, 5c8y:F, 5ca0:F, 5ca1:F, 5cb4:F, 7cda:F, 7ce6:F, 7ce8:F, 7cek:F, 7cld:F, 8cld:F, 8clg:F, 7cnm:F, 7cno:G, 7dad:F, 7dae:F, 7daf:F, 7db9:F, 7dbb:F, 7dbc:F, 7dbd:F, 7dp8:F, 7e4p:F, 7e4r:F, 7e4z:F, 6eg5:F, 7emj:F, 7en3:F, 7exc:F, 5ezy:F, 6fii:F, 6fjf:F, 6fjm:F, 6fkj:F, 6fkl:F, 5h74:F, 5h7o:F, 4i55:F, 6i5c:F, 4ihj:F, 5j2u:F, 7jfr:F, 5jh7:F, 8jjb:F, 8jjc:F, 5jvd:F, 6k9v:F, 6knz:F, 5kx5:F, 7l05:F, 5la6:F, 6lsm:F, 6lsn:F, 5lxs:F, 5lxt:F, 5m8d:F, 6n47:F, 5nfz:F, 5ng1:F, 5njh:F, 6nng:F, 4o4h:F, 4o4i:F, 5ov7:F, 8r67:F, 8riv:F, 8riw:F, 5s4l:F, 5s4m:F, 5s4n:F, 5s4o:F, 5s4p:F, 5s4q:F, 5s4r:F, 5s4s:F, 5s4t:F, 5s4u:F, 5s4v:F, 5s4w:F, 5s4x:F, 5s4y:F, 5s4z:F, 5s50:F, 5s51:F, 5s52:F, 5s53:F, 5s55:F, 5s56:F, 5s57:F, 5s58:F, 5s59:F, 5s5a:F, 5s5b:F, 5s5c:F, 5s5d:F, 5s5e:F, 5s5f:F, 5s5g:F, 5s5h:F, 5s5i:F, 5s5j:F, 5s5k:F, 5s5l:F, 5s5m:F, 5s5n:F, 5s5o:F, 5s5p:F, 5s5q:F, 5s5r:F, 5s5s:F, 5s5t:F, 5s5u:F, 5s5v:F, 5s5w:F, 5s5x:F, 5s5y:F, 5s5z:F, 5s60:F, 5s61:F, 5s62:F, 5s63:F, 5s64:F, 5s65:F, 5s66:F, 5s67:F, 5sb3:F, 5sb4:F, 5sb5:F, 5sb7:F, 5sb8:F, 5sba:F, 5sbb:F, 5sbc:F, 5sbd:F, 5sbe:F, 4tuy:F, 4tv8:F, 4tv9:F, 7vmk:F, 8wd0:F, 5xlt:F, 5xlz:F, 5xp3:F, 6y4m:F, 6y4n:F, 6y6d:F, 5yl2:F, 5ylj:F, 5yls:F, 5yz3:F, 7z2n:F, 7z2p:F, 7z7d:F, 8zb8:F, 4zhq:F, 4zi7:F, 4zol:F
19 5mfa:A 588 26 0.2051 0.0136 0.3077 6.8 6azp:A, 6bmt:A, 4c1m:D, 4c1m:C, 4c1m:A, 4c1m:B, 1cxp:D, 1cxp:C, 1cxp:A, 1cxp:B, 1d2v:D, 1d2v:C, 1d2v:A, 1d2v:B, 1d5l:D, 1d5l:C, 1d5l:A, 1d5l:B, 1d7w:D, 1d7w:C, 1d7w:A, 1d7w:B, 4dl1:D, 4dl1:C, 4dl1:H, 4dl1:G, 4dl1:L, 4dl1:K, 4dl1:P, 4dl1:O, 4dl1:A, 4dl1:B, 4dl1:E, 4dl1:F, 4dl1:I, 4dl1:J, 4dl1:M, 4dl1:N, 1dnu:D, 1dnu:C, 1dnu:A, 1dnu:B, 1dnw:D, 1dnw:C, 1dnw:A, 1dnw:B, 4ejx:B, 4ejx:D, 3f9p:C, 3f9p:D, 3f9p:A, 3f9p:B, 5fiw:A, 5fiw:C, 5fiw:B, 5fiw:D, 7lae:A, 7lae:B, 7lae:E, 7lae:D, 7lag:E, 7lag:B, 7lag:I, 7lag:G, 7lag:A, 7lag:D, 7lag:F, 7lag:H, 7lal:B, 7lal:A, 7lal:E, 7lal:D, 7lan:E, 7lan:B, 7lan:I, 7lan:G, 7lan:A, 7lan:D, 7lan:F, 7lan:H, 1mhl:D, 1mhl:C, 1mhl:A, 1mhl:B, 1myp:C, 1myp:A, 1myp:D, 1myp:B, 7ni1:A, 7ni1:C, 7ni1:B, 7ni1:D, 7ni3:A, 7ni3:C, 7ni3:B, 7ni3:D, 7oih:H, 7oih:G, 7oih:B, 7oih:A, 7oih:D, 7oih:C, 7oih:F, 7oih:E, 5qj2:B, 5qj2:A, 5qj2:E, 5qj2:D, 5qj2:G, 5qj2:F, 5qj2:I, 5qj2:H, 5qj3:B, 5qj3:A, 5qj3:D, 5qj3:E, 7qzr:D, 7qzr:B, 7qzr:A, 7qzr:C, 5uzu:A, 5wdj:B, 5wdj:A, 5wdj:D, 5wdj:E, 6wxz:B, 6wxz:E, 6wxz:A, 6wxz:D, 6wy0:E, 6wy0:B, 6wy0:I, 6wy0:G, 6wy0:A, 6wy0:D, 6wy0:F, 6wy0:H, 6wy5:E, 6wy5:B, 6wy5:A, 6wy5:D, 6wy7:E, 6wy7:B, 6wy7:A, 6wy7:D, 6wyd:A, 6wyd:B, 6wyd:E, 6wyd:D, 6wyd:G, 6wyd:F, 6wyd:H, 6wyd:I, 7z53:D, 7z53:B, 7z53:J, 7z53:H, 7z53:P, 7z53:N, 7z53:V, 7z53:T, 7z53:A, 7z53:C, 7z53:G, 7z53:I, 7z53:M, 7z53:O, 7z53:S, 7z53:U, 3zs0:D, 3zs0:C, 3zs0:A, 3zs0:B, 3zs1:A, 3zs1:C, 3zs1:B, 3zs1:D
20 5s54:F 322 23 0.1795 0.0217 0.3043 6.9 8a9t:F, 8a9z:F, 7cbz:F, 5sb9:F
21 3zqj:C 890 25 0.2821 0.0124 0.4400 7.9
22 3zqj:D 921 25 0.2821 0.0119 0.4400 7.9 3zqj:B, 3zqj:E
23 3zqj:A 944 25 0.2821 0.0117 0.4400 7.9
24 7sh1:A 626 11 0.1795 0.0112 0.6364 9.0 7sh1:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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