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BioLiP
>protein
TAAENPNVEVKDYGDIDKAPEERARGITINTAHVE

The query sequence (length=35) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 1b23:P 405 34 0.9714 0.0840 1.0000 3.79e-17 2c77:A, 2c78:A, 1eft:A, 1exm:A, 4h9g:A, 1ha3:A, 4lbv:A, 4lbw:A, 4lby:A, 4lbz:A, 4lc0:A, 1mj1:A, 1ob5:A, 1ob5:C, 1ob5:E, 2p8w:S, 2p8x:S, 2p8z:S, 1ttt:A, 1ttt:B, 1ttt:C, 1tui:A, 1tui:B, 1tui:C, 4v5l:AZ, 4v8q:BZ
2 6mij:A 388 27 0.6000 0.0541 0.7778 1.55e-08
3 8rdw:H 386 27 0.6000 0.0544 0.7778 1.70e-08 8rd8:H
4 6gfu:A 386 33 0.6571 0.0596 0.6970 1.75e-08 5w76:A, 5w7q:A
5 6htw:B 385 35 0.6571 0.0597 0.6571 2.61e-08 6htw:H, 6i8r:A
6 1d2e:A 397 33 0.6286 0.0554 0.6667 6.31e-08 7a5g:Z, 1d2e:B, 1d2e:C, 1d2e:D, 7o9k:t
7 7paj:9 393 23 0.5429 0.0483 0.8261 5.41e-07 7pak:9, 7pha:9, 7pi9:9, 7pip:9
8 4iw3:B 380 20 0.5143 0.0474 0.9000 4.29e-06 4iw3:K, 4j0q:A, 4j0q:B, 4j0q:C, 4j0q:D, 4j0q:E
9 5w75:C 387 23 0.5143 0.0465 0.7826 4.51e-06 5w75:B, 5w75:D, 5w75:A
10 4zv4:A 392 25 0.4857 0.0434 0.6800 7.74e-06 4zv4:B
11 1ob2:A 393 25 0.4857 0.0433 0.6800 8.88e-06 1d8t:A, 1d8t:B, 1dg1:G, 1dg1:H, 1efc:A, 1efc:B, 6eze:A, 6eze:B, 8fr3:A, 8fr3:B, 2fx3:A, 4g5g:A, 8g7p:z, 8g7q:z, 5jbq:A, 5mi3:A, 5mi3:B, 5mi8:A, 5mi8:B, 5mi9:A, 5mi9:B, 4p3y:A, 8qfs:C, 8qhc:C, 3u2q:A, 3u6k:A, 3u6k:B, 5uyk:Z, 5uyl:Z, 5uym:Z, 5uyn:Z, 5uyp:Z, 5uyq:Z, 4v69:AZ, 4v6k:BC, 4v6l:AC, 5wdt:z, 6wd2:8, 6wd3:8, 6wd5:8, 6wd6:8, 6wd8:8, 5we4:z, 5we6:z, 5wf0:z, 5wfk:z, 5wfs:z
12 8v9l:x 387 27 0.4857 0.0439 0.6296 2.57e-05 7vok:A, 7vok:B, 7vok:C, 7vok:D
13 3wy9:A 416 20 0.3143 0.0264 0.5500 0.22 3wy9:B, 3wya:A
14 6ji2:A 432 20 0.2857 0.0231 0.5000 1.8 4cxg:A, 4cxh:A, 6ji2:E, 3vmf:A, 3wxm:A, 3wxm:C, 3wxm:E, 3wxm:G
15 4zu9:A 582 16 0.2286 0.0137 0.5000 2.0
16 5zm5:A 398 20 0.2286 0.0201 0.4000 3.0 5zm6:A, 5zm6:B, 5zm7:A
17 4ac9:C 471 17 0.2571 0.0191 0.5294 4.2 4ac9:A, 4ac9:B, 4aca:B, 4aca:C, 4acb:A, 4acb:B, 4acb:C
18 3owa:C 587 21 0.2286 0.0136 0.3810 4.3 3owa:A, 3owa:B, 3owa:D
19 5lzb:z 614 17 0.2286 0.0130 0.4706 4.5 5lzc:z, 5lzd:z, 2pjp:A
20 8r04:G 180 15 0.2857 0.0556 0.6667 5.7 8r04:A, 8r04:B, 8r04:C, 8r04:D, 8r04:E, 8r04:F, 8r04:H, 8r04:I, 8r04:J, 8r04:K, 8r04:L, 8r04:M, 8r04:N
21 5o8w:A 449 17 0.2857 0.0223 0.5882 6.3 2b7b:A, 9bdp:EF1A, 1g7c:A, 1ije:A, 1ijf:A
22 2xze:A 141 17 0.2000 0.0496 0.4118 7.8 2xze:B
23 6u45:A 726 22 0.3143 0.0152 0.5000 8.1 6u43:A, 6u44:A, 6u44:B, 6u45:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417