BioLiP

>protein
SSVPTKLEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAHGWLQWY
MSPISINYQT

The query sequence (length=90) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	6d0j:C	90	90	1.0000	1.0000	1.0000	1.84e-59	6d0k:C, 6d0n:C
2	3ch8:A	190	90	0.8333	0.3947	0.8333	1.30e-44	2qbw:A
3	6ux8:B	86	88	0.8222	0.8605	0.8409	2.00e-44
4	8f0m:B	91	91	0.8222	0.8132	0.8132	8.75e-44
5	5v7p:D	95	93	0.8000	0.7579	0.7742	5.35e-42
6	4lxo:A	184	93	0.7889	0.3859	0.7634	5.30e-41	4lxo:B
7	4lxo:A	184	70	0.2111	0.1033	0.2714	2.32e-04	4lxo:B
8	8vxu:E	90	92	0.8333	0.8333	0.8152	1.20e-40	7szt:F, 8tgy:C, 8tgy:D, 6wk9:C, 6wk9:G
9	4jmh:A	200	90	0.8111	0.3650	0.8111	1.33e-40	4jmg:A
10	5a43:C	96	94	0.8111	0.7604	0.7766	4.19e-40
11	3csb:A	464	93	0.8333	0.1616	0.8065	1.55e-36
12	7l0f:H	94	94	0.7333	0.7021	0.7021	6.84e-36	7l0f:F, 7l0f:B, 7l0f:M, 7l0g:C, 7l0g:D, 7l0g:F, 7l0g:H
13	5mtm:B	92	93	0.7667	0.7500	0.7419	1.60e-35
14	2mnu:A	93	74	0.3222	0.3118	0.3919	3.74e-05
15	6x39:A	100	81	0.3000	0.2700	0.3333	2.72e-04
16	6gvk:A	201	78	0.2889	0.1294	0.3333	0.006	6gvl:A
17	6gvk:A	201	93	0.3000	0.1343	0.2903	0.19	6gvl:A
18	3mdj:C	819	75	0.2333	0.0256	0.2800	0.48	3mdj:A
19	2oaj:A	875	56	0.1778	0.0183	0.2857	2.5
20	4do4:B	400	27	0.1111	0.0250	0.3704	3.0	4do4:A, 4do5:A, 4do5:B, 4do6:A, 4do6:B, 3h55:A, 3h55:B, 3igu:A, 3igu:B
21	6rqx:A	862	79	0.2556	0.0267	0.2911	3.3	6m8p:A, 6m8p:B, 6m8p:C, 6m8p:D, 6m8p:E, 6m8p:F, 6m8p:G, 6m8p:H, 6m8p:I, 6m8p:J, 6m8p:K, 6m8p:L, 6m8p:M, 6m8p:N, 6m8p:O, 6m8p:P, 6m8p:Q, 6m8p:R, 6m8p:S, 6m8p:T, 6m8p:U, 6m8p:V, 3mdj:B, 6mgq:A, 6mgq:B, 6mgq:C, 6q4r:A, 3qnf:A, 3qnf:B, 3qnf:C, 6ryf:A, 6t6r:A, 2yd0:A, 7z28:A
22	5tgz:A	439	33	0.1333	0.0273	0.3636	5.5	7v3z:A, 5xr8:A, 5xra:A
23	3poa:A	96	44	0.1444	0.1354	0.2955	6.0
24	5odu:A	121	32	0.1222	0.0909	0.3438	6.6	5odu:B, 5odu:C, 5odu:D, 5odu:E, 5odu:F, 5odu:G, 5odu:H, 5ofi:C, 5ofi:A, 5ofi:B, 5ofi:D, 5ofi:E, 5ofi:F, 5ofi:G, 5ofi:H, 5ofx:A, 5ofx:B, 5ofx:C, 5ofx:D, 5ofx:E, 5ofx:F, 5ofx:H, 5ofx:G
25	4xdd:A	582	34	0.1333	0.0206	0.3529	6.8	8aio:A, 8aio:B, 8aj6:A, 8aj6:B, 8aln:A, 8aln:B, 8ap2:A, 8ap2:B, 5byq:A, 5byq:B, 5byr:A, 5byr:B, 5bys:A, 5bys:B, 1c4a:A, 1c4c:A, 3c8y:A, 8cjy:A, 8cjy:B, 1feh:A, 6gly:A, 6gly:B, 6glz:A, 6glz:B, 6gm0:A, 6gm0:B, 6gm1:A, 6gm1:B, 6gm2:A, 6gm2:B, 6gm3:A, 6gm3:B, 6gm4:A, 6gm4:B, 6gm8:A, 6gm8:B, 6h63:A, 6h63:B, 5la3:A, 5la3:B, 6n59:A, 6n6p:A, 6nac:A, 5oef:A, 5oef:B, 8pvm:A, 8pvm:B, 7qhf:A, 7qhf:B, 8qm3:A, 8qm3:B, 4xdc:A, 4xdc:B, 4xdd:B, 6yf4:A, 6yf4:B
26	4xyj:A	768	25	0.1222	0.0143	0.4400	7.0	4rh3:A, 4rh3:B, 4rh3:C, 4rh3:D, 4u1r:A, 4u1r:B, 4u1r:C, 4u1r:D, 4wl0:A, 4wl0:B, 4wl0:C, 4wl0:D, 4xyj:B, 4xyj:C, 4xyj:D, 4xyj:E, 4xyj:F, 4xyj:G, 4xyj:H, 4xyk:A, 4xyk:B, 4xyk:C, 4xyk:D, 4xz2:A, 4xz2:B, 4xz2:C, 4xz2:D
27	3fyu:A	318	42	0.1778	0.0503	0.3810	7.6	3fyt:C, 3fyt:E, 3fyt:F, 3fyt:H, 3fyt:L, 3fyu:C, 3fyu:E, 3fyu:I, 3fyu:L, 3fyu:G, 3fyu:N
28	3ozm:A	386	75	0.2222	0.0518	0.2667	9.5	3op2:A, 3op2:B, 3ozm:B, 3ozm:C, 3ozm:D, 3ozm:E, 3ozm:F, 3ozm:G, 3ozm:H, 3ozy:A, 3ozy:B

[Back]