BioLiP

>protein
SSQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFVYEVSKKKNMSDGMARDAG
GKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVFDSLLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLD
QPQVPLSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVA
RICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTK
KVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKI
AHPFTKPFESSYCCPTEDDYEMIQDKYGSHKTETALNALKLVTPKAYLSTMYIGLDFNIVDIHIPCTEFVNLCRSFNEDY
GDHKVFNLALRFVKGYDLPDEVFDENEKRPS

The query sequence (length=511) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	3c66:A	529	527	0.9980	0.9641	0.9677	0.0	3c66:B, 1fa0:A, 1fa0:B, 2q66:A
2	7q72:B	502	506	0.5577	0.5677	0.5632	0.0
3	4lt6:A	467	411	0.3679	0.4026	0.4574	4.22e-133	4lt6:B
4	1q78:A	470	418	0.3738	0.4064	0.4569	1.73e-130	1f5a:A, 1q79:A
5	6p2n:A	748	59	0.0352	0.0241	0.3051	3.9
6	8oki:G	81	43	0.0215	0.1358	0.2558	4.4
7	6ywo:A	354	165	0.0744	0.1073	0.2303	4.9	6ywn:A, 6ywo:B, 6ywo:C, 6ywo:D
8	6vgs:BBB	543	91	0.0431	0.0405	0.2418	5.3	6vgs:AAA, 6vgs:CCC, 6vgs:DDD
9	7xs4:A	329	108	0.0568	0.0881	0.2685	7.7	6l8k:A
10	7a23:C	693	71	0.0411	0.0303	0.2958	8.6	7a24:C, 7aqr:G, 7ar7:G, 7ar8:G, 7arb:G, 8bed:G, 8bpx:G, 8bq5:G, 8bq6:G

[Back]