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BioLiP
>protein
SSAHVLTKDMIQERIVALLESFDKVNDAKNITATANLTSDLGLDSLDVVEVVMAIEEEFGLEIPDHDADEIKTVQQAIDY
VSAQPAAV

The query sequence (length=88) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7b0n:U 88 88 1.0000 1.0000 1.0000 7.99e-59 6rfq:Q, 6rfr:Q, 6y79:Q
2 7zmb:Q 85 82 0.5909 0.6118 0.6341 2.26e-30 7zm7:O, 7zmb:O, 7zme:Q, 7zmg:O, 7zmg:Q
3 8e73:AB 85 82 0.4432 0.4588 0.4756 3.54e-25
4 8bee:U 87 85 0.4545 0.4598 0.4706 1.66e-24 7aqr:U, 7arb:U, 8bpx:U, 8bq5:U, 8bq6:U
5 6sga:Fc 84 84 0.4545 0.4762 0.4762 1.54e-23 6sgb:Fc, 6yxy:EK
6 8iuf:AB 88 88 0.4432 0.4432 0.4432 2.08e-22 8j9h:AB, 8j9i:AB, 8j9j:AB
7 7b0n:T 81 76 0.5455 0.5926 0.6316 5.14e-22 6gcs:O, 7o6y:O, 6rfq:O, 6rfr:O, 6rfs:O, 6y79:O
8 7ar7:T 84 82 0.4432 0.4643 0.4756 4.31e-21 7ar8:T, 8bq6:T
9 7ak6:U 88 82 0.4091 0.4091 0.4390 3.07e-20 7a5h:w, 7ak6:T, 8c2s:T, 8c2s:U, 8ca3:T, 8ca5:T, 8ca5:U, 6g2j:U, 6g72:U, 5gup:O, 5gup:X, 5lnk:j, 5lnk:X, 6odd:A, 7oi6:w, 7oi8:w, 7oie:w, 8olt:T, 8om1:U, 5ool:w, 5oom:w, 8pw7:T1, 8q0a:T, 8q0a:U, 8q0f:U, 8q0o:U, 8q1p:T, 8q1u:T, 8q1y:U, 8q25:T, 8q45:T, 8q46:T, 8q46:U, 8q47:T, 8q47:U, 8q49:U, 6q9b:AB, 6q9d:AA, 6qa9:AA, 6qa9:AB, 6qbx:AA, 6qbx:AB, 6qc5:AA, 6qc6:AA, 6qc7:AA, 6qc8:AB, 7qsd:T, 7qsl:T, 7qsn:T, 8qu5:w, 7r41:T, 7r43:T, 7r44:T, 7r45:T, 7r46:T, 7r47:T, 7r47:U, 7r48:T, 7r4c:T, 7r4d:T, 7r4f:U, 7r4g:T, 8rgt:T, 8ud1:1U, 8ueo:1T, 8ueo:1U, 8uep:1U, 8ueq:1T, 8ueq:1U, 8uer:1T, 8uer:1U, 8ues:1T, 8ues:1U, 8uet:1T, 8ueu:1T, 8ueu:1U, 8uev:1T, 8uew:1T, 8uew:1U, 8uex:1T, 8uex:1U, 8uey:1T, 8uey:1U, 8uez:1T, 8uez:1U, 8ugh:1U, 8ugi:1U, 8ugj:1U, 8ugn:1T, 8ugn:1U, 8ugn:5U, 8ugr:1U, 8ugr:5T, 8ugr:5U, 7v2d:X, 7v2f:X, 7v2k:X, 7v30:X, 7v32:X, 7v33:G, 7v3m:X, 7vbl:X, 7vbp:X, 7vwj:G, 7vwl:X, 7vy1:X, 7vye:X, 7vyi:X, 7vzv:X, 7w00:X, 7w0h:X, 7w1o:X, 7w1p:X, 7w20:X, 7w2k:X, 7w2l:X, 7w31:G, 7w32:X, 7w35:X, 7w4c:X, 7w4g:X, 7w4j:X, 7w4k:X, 7w4l:X, 7w4n:X, 7zdh:X, 7zdm:j, 7zdm:X, 7zdp:X, 7zdp:j, 6zka:X, 6zkb:X, 6zkc:X, 6zkd:j, 6zke:X, 6zkf:X, 6zkg:X, 6zkh:X, 6zkh:j, 6zki:X, 6zkj:X, 6zkk:X, 6zkl:X, 6zkm:X, 6zkm:j, 6zkn:X, 6zkn:j, 6zko:X, 6zkp:X, 6zkp:j, 6zkr:X, 6zks:X, 6zkt:X, 6zku:X, 6zr2:T, 6zr2:U, 6ztq:U
10 8iuf:AC 92 87 0.4432 0.4239 0.4483 3.54e-19 8j9h:AC, 8j9i:AC, 8j9j:AC
11 8ba0:U 85 77 0.3864 0.4000 0.4416 6.28e-17 8ba0:T, 8esz:AC
12 2eht:A 77 58 0.3523 0.4026 0.5345 1.56e-16
13 2fac:A 77 58 0.3636 0.4156 0.5517 2.52e-16 2fac:B, 2fad:A, 2fad:B, 2fae:A, 4keh:C, 4keh:D, 1l0i:A, 6n3p:I, 6n3p:L, 6n3p:J, 3ny7:B, 7nyw:G, 7nyx:G, 7nyy:G, 7nyz:G, 7nz0:G, 7nz2:G1, 7nz2:G2, 7nz2:G3, 7nz2:G4, 7nz3:G1, 7nz3:G2, 7nz4:G1, 7nz4:G2, 1t8k:A, 5usr:K, 5vcb:f, 5vcb:e, 5vcb:d, 5vcb:F, 5vcb:D, 5vcb:X, 6w1d:C, 6w98:B
14 3gzl:A 81 51 0.3295 0.3580 0.5686 1.15e-14 2fq0:A, 2fq2:A, 3gzm:B
15 8jfh:E 79 55 0.3182 0.3544 0.5091 6.78e-14 8jfn:B
16 7arc:U 84 85 0.3295 0.3452 0.3412 1.52e-13 7ard:U
17 2qnw:A 80 55 0.3182 0.3500 0.5091 6.70e-13
18 2x2b:A 76 58 0.3182 0.3684 0.4828 1.47e-12
19 2fva:A 82 73 0.3409 0.3659 0.4110 1.24e-09
20 6lvu:A 78 58 0.2727 0.3077 0.4138 1.57e-09 6lvu:B
21 2koo:A 81 75 0.3523 0.3827 0.4133 4.57e-08 2kop:A, 2koq:A, 2kor:A, 2kos:A
22 2ll8:A 101 36 0.1591 0.1386 0.3889 5.36e-04
23 2k0x:A 86 44 0.1591 0.1628 0.3182 0.003 2kg6:A, 2kg8:A, 2kg9:A, 2kga:A, 2kgc:A, 2kgd:A, 2kge:A, 2mvu:A, 2mvv:A
24 6kfu:A 527 43 0.1591 0.0266 0.3256 0.074 6kfm:A, 6kfm:B, 6kfr:A, 6kfr:B
25 6sw9:Z 197 60 0.2273 0.1015 0.3333 0.091 5jb3:Z, 5jbh:Z, 6skf:Ac, 6skg:Ac, 6swc:Z, 6swe:Z, 6th6:Ac, 4v4n:BC, 4v6u:AC, 7zag:Z, 7zah:Z, 7zai:Z, 7zhg:Z
26 4h2y:D 63 25 0.1250 0.1746 0.4400 0.16
27 4h2w:D 75 25 0.1250 0.1467 0.4400 0.24 4h2x:D
28 5kp8:B 78 44 0.1477 0.1667 0.2955 0.27
29 5af0:C 239 28 0.1250 0.0460 0.3929 1.1 5af0:A, 5af0:B, 5af0:D
30 6tmf:C 193 32 0.1250 0.0570 0.3438 1.3
31 5hv8:A 95 25 0.1136 0.1053 0.4000 2.1
32 5fbs:A 787 38 0.1591 0.0178 0.3684 3.7
33 2o36:A 654 76 0.2159 0.0291 0.2500 4.1 1s4b:P
34 4a25:B 169 61 0.2045 0.1065 0.2951 5.6 4a25:A, 4a25:C, 4a25:D
35 8qzi:E 86 54 0.1818 0.1860 0.2963 5.9 7bdw:B, 6rcx:B
36 7qm2:B 165 59 0.1932 0.1030 0.2881 7.3 7qf7:A, 7qfa:A, 7qfa:B, 7qfa:C
37 8ibk:A 546 44 0.1136 0.0183 0.2273 7.5 8ids:A, 5zcb:A, 5zcc:A, 5zcd:A, 5zce:A
38 4bph:A 85 42 0.1591 0.1647 0.3333 8.0
39 3iiv:B 262 51 0.1250 0.0420 0.2157 8.3 7ac8:A, 7ac8:C, 7ac8:E, 6ct3:A, 5d2t:A, 5d2w:A, 6dc1:A, 6dc1:B, 6dc1:H, 6dc1:K, 6dkv:A, 6dnj:A, 1gpw:C, 1gpw:E, 6rtz:A, 6ru0:A, 6ru0:C, 6ru0:E, 2wjz:A, 2wjz:C
40 2lki:A 83 42 0.1932 0.2048 0.4048 8.9

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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