BioLiP

>protein
SRMDDKRFNCEKELTLAVIGGKWKMLILWHLGKEGTKRFNELKTLIPDITQKILVNQLRELEQDMIVHREVYPVVPPKVE
YSLTPHGESLMPILEAMYEWGKGYMELIDI

The query sequence (length=110) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	7bzg:A	110	110	1.0000	1.0000	1.0000	1.41e-78	7bzg:B, 7bzg:E, 7bzg:F, 7bzg:I, 7bzg:J
2	2f2e:B	140	104	0.3273	0.2571	0.3462	8.83e-09
3	8d8j:d	660	50	0.1182	0.0197	0.2600	0.57	8d8k:d
4	9j8e:B	296	53	0.1364	0.0507	0.2830	0.69	9j8e:A
5	1mdx:A	366	46	0.1182	0.0355	0.2826	0.91	1mdo:A, 1mdz:A, 4oca:A
6	7q8e:A	397	45	0.1273	0.0353	0.3111	2.5	6gs2:B, 6gs2:D, 6h5e:B, 6h5e:D, 7q8e:C
7	4i5q:A	220	22	0.0909	0.0455	0.4545	2.6
8	5ygk:C	217	93	0.2273	0.1152	0.2688	3.6	5gul:A, 5gul:B, 5gul:C, 5gul:D, 5ygk:A, 5ygk:B, 5ygk:H, 5ygk:D, 5ygk:E, 5ygk:F, 5ygk:G
9	8a1h:A	516	26	0.0818	0.0174	0.3462	4.2	7ykn:A
10	7evg:A	426	55	0.1273	0.0329	0.2545	4.4	7don:B, 7evb:B, 7evc:B, 7evd:B, 7eve:B, 7evh:A, 7evi:B, 7evk:B, 7evl:B, 7f1a:B, 7f1b:A
11	4u4a:A	214	27	0.1000	0.0514	0.4074	7.2	3coj:X, 3coj:A, 3coj:F, 3coj:B, 3coj:C, 3coj:D, 3coj:E, 3coj:G, 4ifi:A, 4igk:A, 4igk:B, 4jlu:A, 3k0h:A, 3k0k:A, 3k15:A, 3k16:A, 4ofb:A, 3pxe:A, 3pxe:B, 3pxe:C, 3pxe:D, 1t15:A, 1t29:A, 1t2v:A, 1t2v:E, 1t2v:B, 1t2v:C, 1t2v:D, 4u4a:B, 4u4a:C, 4y18:A, 4y18:B, 4y18:C, 4y18:D, 4y18:E, 4y18:F, 4y18:G, 4y18:H, 4y2g:A, 1y98:A
12	5nx9:D	477	63	0.1364	0.0314	0.2381	7.8	2j91:A, 2j91:D, 2j91:B, 2j91:C, 5nx9:A, 5nx9:B, 5nxa:A, 5nxa:B, 5nxa:D, 5nxa:E, 5nxa:G, 5nxa:H, 5nxa:F, 2vd6:A, 2vd6:D, 2vd6:B, 2vd6:C
13	5nx9:C	441	63	0.1364	0.0340	0.2381	8.1
14	3dv0:E	344	62	0.1455	0.0465	0.2581	9.4	1w88:A, 1w88:C, 1w88:E, 1w88:G
15	5nxa:C	418	63	0.1364	0.0359	0.2381	9.7

[Back]