BioLiP

>protein
SHNEKLAKKKIVSIDAGRKYFSPEQLKEIIDKAKHYGYTDLHLLVGNDGLRFMLDDMSITANGKTYASDDVKRAIEKGTN
DYYNDPNGNHLTESQMTDLINYAKDKGIGLIPTVNSPGHMDAILNAMKELGIQNPNFSYFGKKSARTVDLDNEQAVAFTK
ALIDKYAAYFAKKTEIFNIGLDEYANDATDAKGWSVLQADKYYPNEGYPVKGYEKFIAYANDLARIVKSHGLKPMAFNDG
IYYNSDTSFGSFDKDIIVSMWTGGWGGYDVASSKLLAEKGHQILNTNDAWYYVLGRNADGQGWYNLDQGLNGIKNTPITS
VPKTEGADIPIIGGMVAAWADTPSARYSPSRLFKLMRHFANANAEYFAADYESAEQALNEVPKDLNRYTAESVTAVKEAE
KAIRSLDSNLSRAQQDTIDQAIAKLQETVNNLTLT

The query sequence (length=435) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	2yll:A	436	433	0.9954	0.9931	1.0000	0.0	4az5:A, 4az6:A, 4az7:A, 4azb:A, 2yl6:A, 2yl8:A
2	4azc:B	421	435	0.5172	0.5344	0.5172	3.20e-149	4azc:A, 4azc:C, 4azc:D, 4azg:A, 4azg:B, 4azh:A, 4azh:B, 4azh:C, 4azh:D, 4azi:A, 4azi:B, 2yl5:A, 2yl5:C, 2yl9:C, 2yla:B, 2yla:C
3	7pul:A	347	361	0.4322	0.5418	0.5208	5.61e-127
4	1yht:A	344	306	0.1862	0.2355	0.2647	2.65e-19
5	5bxp:A	636	206	0.1425	0.0975	0.3010	5.60e-16	5bxp:B, 5bxr:A, 5bxr:B, 5bxs:A, 5bxs:B, 5bxt:A, 5bxt:B, 4h04:A, 4h04:B, 4jaw:A, 4jaw:B
6	8pxv:B	634	283	0.1563	0.1073	0.2403	5.61e-11	8pxv:C
7	8hvc:A	602	280	0.1655	0.1196	0.2571	3.15e-10	8hvb:A, 8hvd:A
8	7wdt:A	819	138	0.0897	0.0476	0.2826	5.81e-10	7wdu:A, 6z14:JJJ
9	6q63:A	751	396	0.1908	0.1105	0.2096	6.18e-10	6q63:B, 6q63:C
10	6je8:A	469	248	0.1264	0.1173	0.2218	3.67e-09	6jea:A, 6jeb:A
11	7ezt:B	727	341	0.1655	0.0990	0.2111	1.71e-08
12	6k35:A	640	183	0.0989	0.0672	0.2350	3.09e-08	6k35:B
13	5fcz:A	499	175	0.1057	0.0922	0.2629	3.79e-08	4c7f:A, 4c7f:B, 4c7g:A, 1hp5:A, 1jak:A, 1m01:A, 1m03:A, 1m04:A
14	3sur:A	504	137	0.0874	0.0754	0.2774	1.03e-06	3sus:A, 3sut:A, 3suu:A, 3suv:A, 3suw:A
15	4pys:A	492	284	0.1356	0.1199	0.2077	5.46e-05	4pys:B
16	7dva:A	523	193	0.1103	0.0918	0.2487	7.98e-04	7dva:B, 7dvb:A, 7dvb:B, 7dvb:C, 7dvb:D
17	1c7s:A	858	348	0.1609	0.0816	0.2011	0.001	1c7t:A
18	3s6t:A	575	315	0.1609	0.1217	0.2222	0.015	3nsn:A, 3ozo:A, 3ozp:A, 3vtr:A, 3wmb:A, 3wmc:A, 5y0v:A, 5y1b:A
19	3ag6:A	283	47	0.0345	0.0530	0.3191	0.20	3ag6:B, 2x3f:A, 2x3f:B
20	3qgu:A	406	86	0.0552	0.0591	0.2791	0.30
21	2xts:A	389	74	0.0460	0.0514	0.2703	0.41	2xts:C
22	3oo6:A	390	61	0.0506	0.0564	0.3607	0.97	3oo6:B
23	7jrl:A	457	72	0.0598	0.0569	0.3611	1.1	7jrm:A
24	8f9y:A	352	29	0.0322	0.0398	0.4828	1.2
25	7oz9:BBB	483	53	0.0299	0.0269	0.2453	1.7	7oz9:AAA
26	6ncr:A	342	53	0.0506	0.0643	0.4151	2.0	6ncr:B
27	3hsk:A	358	77	0.0483	0.0587	0.2727	2.2
28	2gk1:I	440	338	0.1632	0.1614	0.2101	3.2	2gk1:J, 2gk1:K, 2gk1:L
29	2nz2:A	402	92	0.0644	0.0697	0.3043	3.7
30	9ash:J	311	96	0.0690	0.0965	0.3125	4.0	9asi:J, 6xn3:J, 6xn4:J, 6xn5:J, 6xn7:J
31	5oar:D	498	28	0.0207	0.0181	0.3214	4.3	5oar:B
32	4pj3:A	1335	65	0.0437	0.0142	0.2923	6.0	7a5p:U, 6icz:Q, 6id1:Q, 7w59:Q, 7w5a:Q, 7w5b:Q, 5xjc:Q
33	8ihq:A	399	57	0.0299	0.0326	0.2281	7.1	8ihq:B, 8ihq:C, 8ihq:D, 8ihq:E, 8ihq:F, 8ihq:G, 8ihq:H, 8ihr:A, 8ihr:B, 8ihr:C, 8ihr:D, 8ihr:E, 8ihr:F, 8ihr:G, 8ihr:H, 8ihs:A, 8ihs:B, 8ihs:C, 8ihs:D, 8ihs:E, 8ihs:F, 8ihs:G, 8ihs:H, 8j85:A, 8j85:B, 8j85:C, 8j85:D, 8j85:E, 8j85:F, 8j85:G, 8j85:H
34	7crc:B	1112	58	0.0460	0.0180	0.3448	8.2	7crc:A, 7crc:C, 7crc:D, 7xoz:A, 7xoz:B
35	1dxq:A	273	29	0.0276	0.0440	0.4138	9.2	1dxq:C, 1dxq:B, 1dxq:D, 1qrd:A, 1qrd:B
36	4psw:A	316	49	0.0345	0.0475	0.3061	9.3	1bob:A, 4psx:A, 4psx:D, 7xay:A

[Back]