Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
SGPRFCADHPFLFFIRHNRANSILFCGRFSSP

The query sequence (length=32) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8h4x:B 32 32 1.0000 1.0000 1.0000 8.68e-18
2 2arq:A 360 31 0.6875 0.0611 0.7097 1.52e-10 2arr:A, 1jrr:A
3 4zk0:A 367 28 0.6562 0.0572 0.7500 3.47e-10
4 7qrn:A 364 29 0.5312 0.0467 0.5862 6.11e-08
5 8gxv:A 353 30 0.5938 0.0538 0.6333 2.10e-07
6 4dy7:F 378 32 0.5312 0.0450 0.5312 2.74e-07
7 1ova:A 385 28 0.5312 0.0442 0.6071 3.34e-06
8 3zha:A 380 28 0.4375 0.0368 0.5000 1.17e-05 4au2:A, 4au2:B, 4au2:D, 4au3:A, 4au3:B, 4au3:C, 4au3:D, 7bdu:A, 7bdu:B, 7bee:A, 7bee:B, 7bfi:A, 7bfi:C, 7bfi:D, 7bfi:B, 3zha:B, 3zha:C, 3zha:D, 3zha:K, 3zha:L, 3zha:P, 3zha:Q
9 4au2:C 338 28 0.4375 0.0414 0.5000 1.18e-05
10 1jmj:A 397 29 0.4375 0.0353 0.4828 5.82e-05
11 1e03:L 423 28 0.4375 0.0331 0.5000 6.17e-04 1azx:I, 1azx:L, 2b5t:I, 1br8:I, 1e03:I, 3evj:I, 3evj:L, 2gd4:I, 2gd4:C, 1jvq:I, 3kcg:I, 1lk6:I, 1nq9:I, 1nq9:L, 1r1l:I, 1sr5:A, 1tb6:I
12 4aqh:B 383 25 0.3750 0.0313 0.4800 6.18e-04 1a7c:A, 4aqh:A, 4aqh:C, 7aqf:A, 7aqg:A, 1dvm:A, 1dvm:C, 1dvm:D, 4g8o:D, 4g8r:A, 4g8r:B, 4ic0:A, 4ic0:C, 3q02:A, 3q02:B, 3q03:A, 3q03:B, 3r4l:A, 3ut3:B
13 7rbw:A 381 30 0.3125 0.0262 0.3333 0.075 7rbw:B
14 6los:A 369 25 0.3125 0.0271 0.4000 0.11
15 5hgc:A 373 24 0.3438 0.0295 0.4583 0.14
16 6l6j:A 669 23 0.2500 0.0120 0.3478 1.7
17 3m7n:E 248 17 0.2812 0.0363 0.5294 3.5 3m7n:F, 3m7n:D, 3m85:F, 3m85:D, 3m85:E
18 7epu:B 748 10 0.2188 0.0094 0.7000 4.0 8b0a:K, 7enn:K, 7otq:K
19 7tef:A 433 29 0.3750 0.0277 0.4138 4.6
20 4x30:A 372 25 0.2812 0.0242 0.3600 5.6 2ceo:A, 2ceo:B, 2riw:A, 2riw:B, 2xn3:A, 2xn3:B, 2xn5:A, 2xn6:A, 2xn6:B, 2xn7:A, 2xn7:B, 4yia:A, 4yia:B
21 7npk:A 352 30 0.2812 0.0256 0.3000 7.5
22 6zz6:D 1050 14 0.2188 0.0067 0.5000 9.4

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417