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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
SGKRPIVANSIQRRGKAKREGGVGKKTTGISKRRQYPNLQKVRVRVAGQEITFRVAASHIPKVYELVERAKGLKLEGLSP
KEIKKELL

The query sequence (length=88) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7azo:L28A 97 88 1.0000 0.9072 1.0000 1.59e-57 7azo:L28B, 7azs:L28A, 7azs:L28B, 9b00:11, 9b00:21, 6b4v:Y, 6b4v:CC, 6boh:Y, 6boh:DC, 6bok:Y, 6bok:BC, 6buw:R1, 6buw:Y1, 6bz6:R1, 6bz6:Y1, 6bz7:R1, 6bz7:Y1, 6bz8:R1, 6bz8:Y1, 6c5l:B1, 6c5l:D1, 6cae:11, 6cae:21, 6cfj:11, 6cfj:21, 6cfk:11, 6cfk:21, 6cfl:11, 6cfl:21, 8cvj:11, 8cvj:21, 8cvk:11, 8cvk:21, 8cvl:11, 8cvl:21, 5czp:Y1, 5czp:R1, 6czr:11, 6czr:21, 5d8b:V, 5d8b:RB, 5dfe:Y1, 5dfe:R1, 5dox:11, 5dox:21, 5doy:11, 5doy:21, 5e7k:J8, 5e7k:F5, 5e81:J8, 5e81:F5, 8ekb:11, 8ekb:21, 5el4:J8, 5el4:F5, 5el5:J8, 5el5:F5, 5el6:J8, 5el6:F5, 5el7:J8, 5el7:F5, 8ev6:11, 8ev6:21, 8ev7:11, 8ev7:21, 5f8k:11, 5f8k:21, 8fc1:11, 8fc1:21, 8fc2:11, 8fc2:21, 8fc3:11, 8fc3:21, 8fc4:11, 8fc4:21, 8fc5:11, 8fc5:21, 8fc6:11, 8fc6:21, 5fdu:11, 5fdu:21, 5fdv:11, 5fdv:21, 6fkr:11, 6fkr:21, 8fom:R1, 8fom:Y1, 8fon:R1, 8fon:Y1, 8g29:11, 8g29:21, 8g2a:11, 8g2a:21, 8g2b:11, 8g2b:21, 8g2c:11, 8g2c:21, 8g2d:11, 8g2d:21, 6gsj:J8, 6gsj:F5, 6gsk:J8, 6gsk:F5, 6gsl:J8, 6gsl:F5, 6gzq:W1, 6gzx:W1, 6gzx:W2, 6gzz:W1, 6gzz:W2, 5hau:1Z, 5hau:2Z, 5hcp:11, 5hcp:21, 5hcq:11, 5hcq:21, 5hcr:11, 5hcr:21, 5hd1:11, 5hd1:21, 5ib7:J8, 5ib7:F5, 5ib8:J8, 5ib8:F5, 5ibb:J8, 5ibb:F5, 5j30:R1, 5j30:Y1, 5j3c:R1, 5j3c:Y1, 5j4b:11, 5j4b:21, 5j4c:11, 5j4c:21, 5j4d:Y, 5j4d:DC, 5j8b:1, 7jql:11, 7jql:21, 7jqm:11, 7jqm:21, 4l47:R1, 4l47:Y1, 4l71:R1, 4l71:Y1, 4lel:R1, 4lel:Y1, 4lfz:R1, 4lfz:Y1, 7lh5:B1, 7lh5:D1, 4lnt:R1, 4lnt:Y1, 4lsk:R1, 4lsk:Y1, 4lt8:R1, 4lt8:Y1, 7md7:11, 7md7:21, 6n1d:AL28, 6n1d:BL28, 6n9e:11, 6n9e:21, 6n9f:11, 6n9f:21, 5ndj:J8, 5ndj:F5, 5ndk:J8, 5ndk:F5, 6nd5:11, 6nd5:21, 6nd6:11, 6nd6:21, 6ndk:R1, 6ndk:Y1, 6nsh:R1, 6nsh:Y1, 6nta:R1, 6nta:Y1, 6nuo:R1, 6nuo:Y1, 6nwy:R1, 6nwy:Y1, 6o3m:R1, 6o3m:Y1, 6o97:11, 6o97:21, 6of1:11, 6of1:21, 6of6:R1, 6of6:Y1, 6oj2:R1, 6oj2:Y1, 6ope:R1, 6ope:Y1, 6ord:R1, 6ord:Y1, 6osi:R1, 6osi:Y1, 5ot7:W, 6otr:R1, 6otr:Y1, 6oxa:R1, 6oxa:Y1, 6oxi:R1, 6oxi:Y1, 4p6f:R1, 4p6f:Y1, 4p70:R1, 4p70:Y1, 6q95:X, 6qnq:J8, 6qnq:F5, 6qnr:J8, 6qnr:F5, 7rq8:11, 7rq8:21, 7rq9:11, 7rq9:21, 7rqa:11, 7rqa:21, 7rqb:11, 7rqb:21, 7rqc:11, 7rqc:21, 7rqd:11, 7rqd:21, 7rqe:11, 7rqe:21, 8t8b:11, 8t8b:21, 8t8c:11, 8t8c:21, 4tua:R1, 4tua:Y1, 4tub:R1, 4tub:Y1, 4tuc:R1, 4tuc:Y1, 4tud:R1, 4tud:Y1, 4tue:R1, 4tue:Y1, 7u2h:11, 7u2h:21, 7u2i:11, 7u2i:21, 7u2j:11, 7u2j:21, 6ucq:11, 6ucq:21, 8ud6:11, 8ud6:21, 8ud7:11, 8ud7:21, 8ud8:11, 8ud8:21, 6uo1:11, 6uo1:21, 5uq7:1, 5uq8:1, 8uvr:11, 8uvr:21, 8uvs:11, 8uvs:21, 4v4i:V, 4v4j:V, 4v51:B1, 4v51:D1, 4v5a:B1, 4v5a:D1, 4v5c:B1, 4v5c:D1, 4v5d:B1, 4v5d:D1, 4v5e:B1, 4v5e:D1, 4v5f:B1, 4v5f:D1, 4v5g:B1, 4v5g:D1, 4v5j:B1, 4v5j:D1, 4v5k:B1, 4v5k:D1, 4v5l:B1, 4v5m:B1, 4v5n:B1, 4v5p:B1, 4v5p:D1, 4v5q:B1, 4v5q:D1, 4v5r:B1, 4v5r:D1, 4v5s:B1, 4v5s:D1, 4v63:B1, 4v63:D1, 4v67:B1, 4v67:D1, 4v68:B1, 4v6a:B1, 4v6a:D1, 4v6f:AZ, 4v6f:DZ, 4v6g:BZ, 4v6g:DZ, 4v7j:A1, 4v7j:B1, 4v7k:A1, 4v7k:B1, 4v7l:B1, 4v7l:D1, 4v7m:B1, 4v7m:D1, 4v7p:BX, 4v7p:CX, 4v7w:B1, 4v7w:D1, 4v7x:B1, 4v7x:D1, 4v7y:B1, 4v7y:D1, 4v7z:B1, 4v7z:D1, 4v83:BX, 4v83:DX, 4v84:BX, 4v84:DX, 4v87:AZ, 4v87:DZ, 4v8a:A1, 4v8a:B1, 4v8b:BZ, 4v8b:DZ, 4v8c:AZ, 4v8c:BZ, 4v8d:BZ, 4v8d:DZ, 4v8e:AZ, 4v8e:CZ, 4v8f:AZ, 4v8f:DZ, 4v8g:B1, 4v8g:D1, 4v8h:B1, 4v8h:D1, 4v8i:B1, 4v8i:D1, 4v8j:B1, 4v8j:D1, 4v8n:B1, 4v8n:D1, 4v8o:B1, 4v8q:A1, 4v8u:B1, 4v8u:D1, 4v8x:B1, 4v8x:D1, 5v8i:11, 5v8i:21, 4v90:B1, 4v95:B1, 4v95:D1, 4v97:B1, 4v97:D1, 4v9a:BZ, 4v9a:DZ, 4v9b:BZ, 4v9b:DZ, 4v9h:B1, 4v9i:B1, 4v9i:D1, 4v9j:B1, 4v9j:D1, 4v9k:B1, 4v9k:D1, 4v9l:B1, 4v9l:D1, 4v9m:B1, 4v9m:D1, 4v9n:B1, 4v9n:D1, 4v9q:AX, 4v9q:CX, 4v9r:B1, 4v9r:D1, 4v9s:B1, 4v9s:D1, 5vp2:11, 5vp2:21, 5vpo:R1, 5vpo:Y1, 5vpp:R1, 5vpp:Y1, 8vtu:11, 8vtu:21, 8vtv:11, 8vtv:21, 8vtw:11, 8vtw:21, 8vtx:11, 8vtx:21, 8vty:11, 8vty:21, 1vvj:R1, 1vvj:Y1, 1vy4:B1, 1vy4:D1, 1vy5:B1, 1vy5:D1, 1vy6:B1, 1vy6:D1, 1vy7:B1, 1vy7:D1, 4w29:B1, 4w29:D1, 4w2e:1, 4w2f:B1, 4w2f:D1, 4w2g:B1, 4w2g:D1, 4w2h:B1, 4w2h:D1, 4w2i:B1, 4w2i:D1, 4w4g:R1, 4w4g:Y1, 5w4k:11, 5w4k:21, 5wis:11, 5wis:21, 5wit:11, 5wit:21, 4wpo:A1, 4wpo:C1, 4wq1:J8, 4wq1:F5, 4wqf:A1, 4wqf:C1, 4wqr:J8, 4wqr:F5, 4wqu:A1, 4wqu:C1, 4wqy:A1, 4wqy:C1, 4wr6:J8, 4wr6:F5, 4wra:J8, 4wra:F5, 4wro:J8, 4wsd:J8, 4wsd:F5, 4wsm:J8, 4wsm:F5, 4wt1:J8, 4wt1:F5, 4wt8:CH, 4wt8:DH, 4wu1:J8, 4wu1:F5, 4wzd:J8, 4wzd:F5, 4wzo:J8, 4wzo:F5, 4xej:AL28, 4xej:BL28, 6xhv:11, 6xhv:21, 6xhw:11, 6xhw:21, 6xhx:11, 6xhx:21, 6xhy:11, 6xhy:21, 6xqd:11, 6xqd:21, 6xqe:11, 6xqe:21, 4y4o:11, 4y4o:21, 4y4p:11, 4y4p:21, 4ypb:R1, 4ypb:Y1, 4yzv:R1, 4yzv:Y1, 4z3s:11, 4z3s:21, 4z8c:11, 4z8c:21, 4zer:11, 4zer:21, 4zsn:R1, 4zsn:Y1
2 7a0r:U 74 60 0.3409 0.4054 0.5000 9.67e-13 7a0s:U, 7a18:U, 3cf5:U, 3dll:U, 5dm6:U, 5dm7:U, 4io9:U, 4ioa:U, 4ioc:U, 5jvg:U, 5jvh:U, 3pio:U, 3pip:U, 4u67:U, 4wfn:U, 2zjp:U, 2zjq:U, 2zjr:U
3 8fmw:AZ 91 68 0.2045 0.1978 0.2647 0.045 8fn2:Z
4 6skl:4 679 72 0.2614 0.0339 0.3194 1.5 8kg9:4, 8xgc:4
5 4v8m:BK 212 57 0.1818 0.0755 0.2807 1.6 8ova:BK, 8ove:BK
6 2y64:A 167 55 0.1705 0.0898 0.2727 1.6 4bj0:A, 5dpn:A, 3jxs:A, 3jxs:B, 3jxs:C, 2y6g:A, 2y6h:A, 2y6j:A, 2y6k:A, 2y6l:A
7 7qbk:A 284 61 0.1932 0.0599 0.2787 1.7
8 3jcs:N 213 57 0.1818 0.0751 0.2807 2.2 6az3:N, 8ovj:N, 8rxh:LN, 8rxx:LN, 5t2a:J
9 6lzy:A 454 68 0.1932 0.0374 0.2500 2.2 6lzx:A, 6lzx:B, 6lzy:B, 7vej:A, 7vej:B, 7vek:A, 7vek:B, 7vel:A, 7vel:B
10 4ojv:A 363 18 0.1136 0.0275 0.5556 2.7 4ojx:A
11 8kg8:4 697 75 0.2727 0.0344 0.3200 3.2 8b9a:4, 8b9b:4, 8b9c:4, 8kg6:4, 8p5e:4, 8p62:4, 8p63:4, 7pmk:4, 7pmn:4, 7qhs:4, 6sko:4, 8w7m:4, 7z13:4, 7z13:c
12 8p2f:1 61 27 0.1477 0.2131 0.4815 5.2 7asm:V, 7asn:V, 7aso:c, 7asp:V, 6ddd:J, 6ddg:J, 6fxc:AV, 6fxc:BV, 5hkv:U, 5hl7:U, 6hma:V, 5li0:0, 5nd8:0, 5nd9:0, 5ngm:AV, 7nhl:1, 7nhm:1, 8p2g:1, 8p2h:1, 7p48:V, 6s0x:V, 6s0z:V, 6s12:V, 6s13:V, 6sj6:0, 5t7v:LA, 5tcu:LA, 7ttu:J, 7ttw:J, 4wce:U, 4wfa:U, 4wfb:U, 6wqn:J, 6wqq:J, 6wrs:J, 6wru:J, 8y36:V, 8y37:V, 8y38:V, 8y39:V, 6yef:0
13 8uu4:Z 60 43 0.1818 0.2667 0.3721 5.7 8a57:1, 8a5i:1, 8a63:1, 7nhn:1, 8uu5:Z, 8uu6:Z, 8uu7:Z, 8uu8:Z, 8uu9:Z, 8uua:Z
14 4epp:A 439 50 0.1932 0.0387 0.3400 6.8 4epp:B, 4epq:A, 4l2h:A
15 7p7q:Z 61 19 0.1250 0.1803 0.5789 7.5 7nhk:Z, 6o8w:Y, 6o8x:Y, 6o8y:Y, 6o8z:Y, 6o90:Y, 7p7r:Z, 7p7s:Z, 7p7t:Z, 7p7u:Z, 6w6p:Y, 6wu9:Y
16 8bx8:C 3947 36 0.1023 0.0023 0.2500 8.6 7k58:C, 7k5b:C, 7kek:C

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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