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BioLiP
>protein
SAKELRCQCIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKLSDGRELCLDPKENWVQRVVEKFL

The query sequence (length=66) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1ilp:A 71 65 0.9848 0.9155 1.0000 2.89e-44 1ilq:A, 6xmn:A
2 4r9w:B 64 63 0.3636 0.3750 0.3810 4.81e-13
3 2nwg:A 68 46 0.2576 0.2500 0.3696 8.47e-05 2nwg:B, 4uai:A
4 2ra4:B 65 30 0.1818 0.1846 0.4000 0.002
5 7f1t:A 423 54 0.2424 0.0378 0.2963 0.002 6akx:A, 6akx:B, 6aky:A, 5d65:B, 5d65:A, 5d65:D, 4mbs:A, 4mbs:B, 5uiw:A
6 2hci:A 68 55 0.2273 0.2206 0.2727 0.007
7 2mpm:A 74 38 0.2121 0.1892 0.3684 0.007
8 4r8i:A 68 34 0.1667 0.1618 0.3235 0.052
9 6fgp:B 68 57 0.2121 0.2059 0.2456 0.13 1b3a:B, 1b3a:A, 5coy:A, 5dnf:C, 5dnf:D, 5dnf:I, 5dnf:A, 5dnf:F, 5dnf:G, 5dnf:H, 1u4l:A, 1u4m:A
10 8tzc:A 872 25 0.1515 0.0115 0.4000 0.73
11 8txz:A 858 48 0.2273 0.0175 0.3125 1.5
12 8u8b:A 1712 48 0.2273 0.0088 0.3125 1.6 8u7l:B, 8u7l:A, 8u8a:B, 8u8a:C, 8u8b:B, 2zej:A
13 8u7h:C 1111 48 0.2273 0.0135 0.3125 1.7
14 8tzg:A 906 48 0.2273 0.0166 0.3125 1.7
15 8tzf:A 1589 48 0.2273 0.0094 0.3125 1.7
16 8tyq:A 957 48 0.2273 0.0157 0.3125 1.7 8tze:A
17 6vno:A 1084 48 0.2273 0.0138 0.3125 1.7 6vp6:A
18 8smc:C 1084 48 0.2273 0.0138 0.3125 1.8
19 8tzb:A 920 48 0.2273 0.0163 0.3125 1.8
20 8fo9:A 1173 48 0.2273 0.0128 0.3125 1.8 8fo9:C
21 8fo9:F 2289 48 0.2273 0.0066 0.3125 1.9 9c61:A, 9c61:B, 8fo2:E, 8fo7:C, 8fo8:C, 8fo8:E, 8fo9:E, 7lht:A, 7lht:B, 7lhw:A, 7li3:A, 7li4:A, 6oje:A, 6oje:B, 6ojf:A, 6ojf:B, 7thy:A, 7thz:A, 6xaf:A, 6xaf:B, 2zej:B
22 2xz7:A 324 24 0.1061 0.0216 0.2917 3.0 2xz9:A, 2xz9:B
23 3c6g:B 467 35 0.1970 0.0278 0.3714 5.9 3c6g:A, 3czh:A, 3czh:B, 3dl9:A, 3dl9:B
24 6yws:h 98 26 0.1364 0.0918 0.3462 7.8
25 5g26:A 241 25 0.1212 0.0332 0.3200 8.3

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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