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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
SADLALGKQTFEANCAACHAGGNNSVIPDHTLRKAAMEQFLQGGFNLEAITYQVENGKGAMPAWSGTLDDDEIAAVAAYV
YDQASGDKW

The query sequence (length=89) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1c6o:A 89 89 1.0000 1.0000 1.0000 3.76e-63 1c6o:B, 1c6r:A
2 1a2s:A 89 89 0.7865 0.7865 0.7865 3.71e-50 1ced:A, 1ctj:A
3 1cyj:A 90 88 0.6404 0.6333 0.6477 8.77e-39 1cyi:A
4 1ls9:A 91 86 0.6292 0.6154 0.6512 3.88e-38
5 3dmi:A 87 82 0.5056 0.5172 0.5488 5.38e-27
6 3ph2:B 85 83 0.5618 0.5882 0.6024 7.07e-27 2v08:A, 2v08:B
7 1c6s:A 87 84 0.5281 0.5402 0.5595 1.02e-26 6tr1:A, 6tr1:C, 6tr1:E, 6tsy:A, 6tsy:B, 6tsy:C, 6tsy:D, 6tsy:E, 6tsy:F
8 1gdv:A 85 83 0.4944 0.5176 0.5301 5.71e-25
9 3dr0:A 93 81 0.4944 0.4731 0.5432 1.07e-24 3dr0:B, 3dr0:C, 4eic:A, 4eid:A
10 2zbo:A 86 83 0.4719 0.4884 0.5060 1.03e-23 2zbo:C, 2zbo:E, 2zbo:G, 2zbo:I, 2zbo:K
11 7y5e:GN 84 82 0.4831 0.5119 0.5244 2.48e-23 7y5e:G2, 7y7a:G7, 7y7a:Go
12 1kib:A 89 85 0.4607 0.4607 0.4824 6.55e-22 1f1f:A, 1kib:B, 1kib:C, 1kib:D, 1kib:E, 1kib:F, 1kib:G, 1kib:H
13 4gyd:A 86 86 0.4831 0.5000 0.5000 1.95e-21 4gyd:B, 4gyd:C, 4gyd:D, 4gyd:E, 4gyd:F, 4h0j:A, 4h0j:B, 4h0j:C, 4h0j:D, 4h0j:E, 4h0j:F, 4h0k:A, 4h0k:B
14 4eie:A 82 81 0.3933 0.4268 0.4321 7.65e-14 4eif:A
15 7o38:A 81 74 0.2697 0.2963 0.3243 1.07e-06
16 6hwh:i 162 96 0.3933 0.2160 0.3646 4.75e-06 6hwh:j
17 6hwh:i 162 90 0.3034 0.1667 0.3000 2.9 6hwh:j
18 7e1w:O 223 95 0.3708 0.1480 0.3474 9.82e-06 7e1v:O, 7e1v:C, 7e1w:C, 7e1x:O, 7e1x:C, 8hcr:C, 8hcr:O
19 7e1w:O 223 17 0.1011 0.0404 0.5294 4.4 7e1v:O, 7e1v:C, 7e1w:C, 7e1x:O, 7e1x:C, 8hcr:C, 8hcr:O
20 2dge:A 102 97 0.3258 0.2843 0.2990 4.47e-05 2ce0:A, 2ce1:A, 2dge:C, 2dge:B, 2dge:D, 2v07:A
21 5djq:C 303 84 0.3146 0.0924 0.3333 5.40e-05 5djq:M, 5djq:F, 5djq:I, 3mk7:C, 3mk7:M, 3mk7:F, 3mk7:I
22 5djq:C 303 84 0.2360 0.0693 0.2500 0.19 5djq:M, 5djq:F, 5djq:I, 3mk7:C, 3mk7:M, 3mk7:F, 3mk7:I
23 6adq:C 223 95 0.3820 0.1525 0.3579 5.91e-05 6adq:O, 6hwh:M, 6hwh:K, 8ovc:O, 8ovc:C, 8ovd:O, 8ovd:C, 7rh5:O, 7rh5:I, 7rh6:O, 7rh6:I, 7rh7:O, 7rh7:I
24 6adq:C 223 83 0.2921 0.1166 0.3133 3.7 6adq:O, 6hwh:M, 6hwh:K, 8ovc:O, 8ovc:C, 8ovd:O, 8ovd:C, 7rh5:O, 7rh5:I, 7rh6:O, 7rh6:I, 7rh7:O, 7rh7:I
25 8yts:A 83 86 0.3034 0.3253 0.3140 1.72e-04 8yts:B
26 8snh:G 304 92 0.2921 0.0855 0.2826 1.95e-04
27 8snh:G 304 86 0.2697 0.0789 0.2791 0.076
28 2zon:G 81 81 0.3258 0.3580 0.3580 2.10e-04
29 8smr:G 312 86 0.3258 0.0929 0.3372 2.18e-04
30 8smr:G 312 86 0.2697 0.0769 0.2791 0.003
31 2zzs:A 81 67 0.2584 0.2840 0.3433 2.26e-04 2zzs:B, 2zzs:C, 2zzs:D, 2zzs:E, 2zzs:F, 2zzs:G, 2zzs:H, 2zzs:I, 2zzs:J, 2zzs:K, 2zzs:L, 2zzs:M, 2zzs:N, 2zzs:O, 2zzs:P, 2zzs:Q, 2zzs:R, 2zzs:S, 2zzs:T, 2zzs:U, 2zzs:V, 2zzs:W, 2zzs:X, 2zzs:Y, 2zzs:Z, 2zzs:1, 2zzs:2, 2zzs:3, 2zzs:4, 2zzs:5, 2zzs:6
32 4kmg:A 88 74 0.2472 0.2500 0.2973 4.42e-04
33 3dp5:A 99 58 0.2135 0.1919 0.3276 5.76e-04 3cu4:A, 5mcs:A, 6u97:A
34 4j20:A 88 85 0.3146 0.3182 0.3294 8.81e-04 4j20:B
35 4lji:A 133 87 0.2697 0.1805 0.2759 0.003 4lji:B
36 4yuu:V1 129 105 0.2809 0.1938 0.2381 0.009 4yuu:v1, 4yuu:V2, 4yuu:v2
37 6jlu:V 137 50 0.1798 0.1168 0.3200 0.013 8iwh:V, 8iwh:v, 6j3y:V, 6j3y:v, 6j3z:V, 6j3z:v, 6j40:V, 6j40:v, 8j5k:V, 8j5k:v, 6jlu:v, 7vd5:V, 7vd5:v
38 7o9u:A 153 85 0.2360 0.1373 0.2471 0.014
39 2zoo:A 438 100 0.3258 0.0662 0.2900 0.024
40 6xkw:p 254 76 0.2809 0.0984 0.3289 0.028 6xkx:p, 6xkz:p
41 3a0b:V 137 50 0.1685 0.1095 0.3000 0.032 3a0b:v, 3a0h:V, 3a0h:v, 2axt:V, 2axt:v, 5b5e:V, 5b5e:v, 5b66:V, 5b66:v, 7cji:V, 7cji:v, 7cjj:V, 7cjj:v, 7cou:V, 7cou:v, 7d1t:V, 7d1t:v, 7d1u:V, 7d1u:v, 6dhe:V, 6dhe:v, 6dhf:V, 6dhf:v, 6dhg:V, 6dhg:v, 6dhh:V, 6dhh:v, 6dho:V, 6dho:v, 6dhp:V, 6dhp:v, 5e79:V, 5e79:v, 5e7c:V, 5e7c:v, 7eda:V, 9evx:V, 9evx:v, 8ez5:V, 8ez5:v, 8f4c:V, 8f4c:v, 8f4d:V, 8f4d:v, 8f4e:V, 8f4e:v, 8f4f:V, 8f4f:v, 8f4g:V, 8f4g:v, 8f4h:V, 8f4h:v, 8f4i:V, 8f4i:v, 8f4j:V, 8f4j:v, 8f4k:V, 8f4k:v, 4fby:V, 4fby:i, 8gn0:V, 8gn0:v, 8gn1:V, 8gn1:v, 8gn2:V, 8gn2:v, 5gth:V, 5gth:v, 5gti:V, 5gti:v, 5h2f:V, 5h2f:v, 4il6:V, 4il6:v, 8ir5:V, 8ir5:v, 8ir6:V, 8ir6:v, 8ir7:V, 8ir7:v, 8ir8:V, 8ir8:v, 8ir9:V, 8ir9:v, 8ira:V, 8ira:v, 8irb:V, 8irb:v, 8irc:V, 8irc:v, 8ird:V, 8ird:v, 8ire:V, 8ire:v, 8irf:V, 8irf:v, 8irg:V, 8irg:v, 8irh:V, 8irh:v, 8iri:V, 8iri:v, 4ixq:V, 4ixq:v, 4ixr:V, 4ixr:v, 1izl:V, 1izl:0, 6jlj:V, 6jlj:v, 6jlk:V, 6jlk:v, 6jll:V, 6jll:v, 6jlm:V, 6jlm:v, 6jln:V, 6jln:v, 6jlo:V, 6jlo:v, 6jlp:V, 6jlp:v, 5kaf:V, 5kaf:v, 5kai:V, 5kai:v, 3kzi:V, 5mx2:V, 5mx2:v, 1mz4:A, 4pbu:V, 4pbu:v, 4pj0:V, 4pj0:v, 7rf1:V, 7rf1:v, 7rf2:V, 7rf2:v, 7rf3:V, 7rf3:v, 7rf4:V, 7rf4:v, 7rf5:V, 7rf5:v, 7rf6:V, 7rf6:v, 7rf7:V, 7rf7:v, 7rf8:V, 7rf8:v, 4rvy:V, 4rvy:v, 1s5l:V, 1s5l:v, 5tis:V, 5tis:v, 4tnh:V, 4tnh:v, 4tni:V, 4tni:v, 4tnj:V, 4tnj:v, 4tnk:V, 4tnk:v, 4ub6:V, 4ub6:v, 4ub8:V, 4ub8:v, 5v2c:V, 5v2c:v, 4v62:AV, 4v62:BV, 4v82:AV, 4v82:BV, 6w1o:V, 6w1o:v, 6w1p:V, 6w1p:v, 6w1q:V, 6w1q:v, 6w1r:V, 6w1r:v, 6w1t:V, 6w1t:v, 6w1u:V, 6w1u:v, 6w1v:V, 6w1v:v, 1w5c:T, 1w5c:V, 5ws5:V, 5ws5:v, 5ws6:V, 5ws6:v, 3wu2:V, 3wu2:v, 7yq2:V, 7yq2:v, 7yq7:V, 7yq7:v, 5zzn:V, 5zzn:v
42 8wql:VD 135 54 0.1910 0.1259 0.3148 0.037 1f1c:A, 1f1c:B, 8wql:VE, 8wql:V1, 8wql:v1, 8wql:vD, 8wql:vE
43 1kv9:A 664 86 0.2921 0.0392 0.3023 0.049
44 1cyc:A 103 31 0.1573 0.1359 0.4516 0.064 1cyc:B, 3cyt:O, 3cyt:I, 5cyt:R, 1i54:A, 1i54:B, 1i55:A, 1i55:B, 1lfm:A, 1lfm:B
45 8xr6:V 137 50 0.1573 0.1022 0.2800 0.082 8wb4:V, 8wb4:v, 8xr6:v
46 1wve:C 75 77 0.2247 0.2667 0.2597 0.12 1dii:C, 1dii:D, 1diq:C, 1diq:D, 1wve:D
47 7qhm:C 233 19 0.1236 0.0472 0.5789 0.42 7q21:C, 7q21:c, 7qhm:P, 7qho:C, 7qho:P
48 2yev:B 319 14 0.1011 0.0282 0.6429 0.43 2yev:E
49 5b6q:A 76 56 0.2135 0.2500 0.3393 0.49 5b6q:B, 6k7c:A, 6k7c:C
50 8hn3:A 80 79 0.2472 0.2750 0.2785 0.50 8hn3:B
51 8uf3:A 187 26 0.1573 0.0749 0.5385 0.55 8uf3:B
52 7y5e:VL 134 23 0.1124 0.0746 0.4348 0.59 7y5e:V6, 7y5e:v6, 7y5e:vL, 7y7a:V9, 7y7a:v9, 7y7a:VE, 7y7a:vE, 7y7a:VO, 7y7a:vO, 7y7a:VZ, 7y7a:vZ, 7y7a:Vm, 7y7a:vm
53 8smr:K 181 72 0.2247 0.1105 0.2778 0.85 6q2u:A, 8smr:N, 8snh:K, 8snh:N
54 8eqm:V 131 50 0.1685 0.1145 0.3000 0.86 8eqm:v
55 2l4d:A 106 18 0.0899 0.0755 0.4444 0.88
56 6f0k:E 182 87 0.2472 0.1209 0.2529 0.96
57 1kb0:A 670 86 0.2360 0.0313 0.2442 1.1
58 8hdd:B 121 83 0.2360 0.1736 0.2530 1.5
59 1gks:A 78 72 0.2022 0.2308 0.2500 1.7
60 6s3a:A 209 36 0.1348 0.0574 0.3333 2.3 6t3w:A
61 8gy3:A 440 77 0.2360 0.0477 0.2727 2.5
62 2xts:D 204 19 0.1124 0.0490 0.5263 2.7 2xts:B
63 1akk:A 104 31 0.1236 0.1058 0.3548 5.4 2b4z:A, 5c0z:A, 5c0z:D, 5c0z:B, 5c0z:C, 5c9m:A, 5c9m:D, 5c9m:B, 5c9m:C, 1crc:A, 1crc:B, 5df5:A, 5df5:B, 5df5:C, 5df5:D, 8dvx:A, 8dvx:D, 8dvx:B, 8dvx:C, 8dzl:A, 8dzl:B, 8dzl:C, 8dzl:D, 6ff5:A, 1fi7:A, 1fi9:A, 2frc:A, 1giw:A, 2giw:A, 1hrc:A, 1i5t:A, 5iy5:1, 5iy5:2, 3j2t:H, 3j2t:I, 3j2t:J, 3j2t:K, 3j2t:L, 3j2t:M, 3j2t:N, 3jbt:B, 3jbt:D, 3jbt:F, 3jbt:H, 3jbt:J, 3jbt:L, 3jbt:N, 5juy:H, 5juy:I, 5juy:J, 5juy:K, 5juy:L, 5juy:M, 5juy:N, 6k9i:A, 6k9j:A, 1lc1:A, 1lc2:A, 7ljx:A, 7ljx:B, 1m60:A, 6n1o:A, 6n1o:B, 6n1o:C, 6n1o:D, 2n3b:A, 3nbs:A, 3nbs:B, 3nbs:C, 3nbs:D, 3nbt:A, 3nbt:E, 3nbt:B, 3nbt:C, 3nbt:D, 3nbt:F, 4nfg:B, 3o1y:A, 3o1y:B, 3o1y:C, 3o20:A, 3o20:B, 3o20:C, 1ocd:A, 2pcb:B, 4rsz:A, 4rsz:B, 4rsz:C, 4rsz:D, 4rsz:E, 4rsz:F, 6suv:AaA, 6suv:BaB, 6suv:CaC, 6suv:DaD, 6suv:EaE, 6suv:FaF, 6suv:GaG, 6suv:HaH, 1u75:B, 3wc8:A, 1wej:F, 3wui:A, 5wve:B, 5wve:D, 5wve:F, 5wve:H, 5wve:J, 5wve:L, 5wve:N, 2ybb:Y, 5zkv:A
64 6g0c:A 624 32 0.1236 0.0176 0.3438 6.6

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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