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BioLiP
>protein
RVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVKVD

The query sequence (length=74) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2m8d:B 91 74 1.0000 0.8132 1.0000 7.58e-51 7abg:A6
2 8fnk:13 127 69 0.3919 0.2283 0.4203 8.59e-13 6e4p:C, 6e4p:I, 6e4p:B
3 7qde:B 169 64 0.3378 0.1479 0.3906 9.22e-09 7qdd:B
4 7ohx:o 112 68 0.2432 0.1607 0.2647 0.31
5 6c0f:o 133 68 0.2432 0.1353 0.2647 0.38 7btb:o, 6cb1:o, 8e5t:o, 6elz:o, 6em1:o, 6em3:o, 6em4:o, 6em5:o, 3jct:o, 6m62:o, 7nac:o, 7ohp:o, 7ohq:o, 7ohr:o, 7ohs:o, 7ohv:o, 7ohw:o, 7r6q:o, 7r7a:o, 7u0h:o, 7uoo:o, 7uqb:o, 7uqz:o, 7v08:o, 8v83:o, 8v84:o, 8v87:o, 6ylx:o, 6yly:o, 5z3g:E
6 4bs2:A 174 51 0.2297 0.0977 0.3333 0.48 4iuf:A, 4y00:A, 4y00:B, 4y00:C, 4y00:D, 4y0f:A, 4y0f:B
7 8i0v:4 161 65 0.2703 0.1242 0.3077 0.81
8 6m75:A 167 46 0.2027 0.0898 0.3261 0.91
9 7csz:A 175 62 0.1892 0.0800 0.2258 2.5
10 7arh:E 409 32 0.1486 0.0269 0.3438 2.5 7arl:E, 7mdx:B, 7v8l:E
11 1js1:X 324 56 0.2297 0.0525 0.3036 3.2 2fg6:X, 2fg6:Z, 2fg6:Y, 2fg6:C, 2fg6:D, 2fg6:E, 2fg7:X, 2fg7:Z, 2fg7:Y, 2fg7:C, 2fg7:D, 2fg7:E, 2g7m:X, 2g7m:Z, 2g7m:Y, 2g7m:C, 2g7m:E, 2g7m:D, 1js1:Y
12 6kz8:A 784 26 0.1622 0.0153 0.4615 5.7 6kz8:B, 6kz9:A
13 4aam:A 324 31 0.1622 0.0370 0.3871 6.7 4aal:A, 4aal:B, 4aan:A, 4aao:B
14 8wus:E 453 19 0.1486 0.0243 0.5789 7.6 6b1q:A, 6b1r:A, 6b1s:A, 6b1s:B, 8cs0:A, 1d0e:A, 1d1u:A, 8dw1:A, 8dw8:A, 8dwm:A, 2fjv:A, 2fjw:A, 2fjx:A, 3fsi:A, 2fvp:A, 2fvq:A, 2fvr:A, 2fvs:A, 4hkq:A, 1i6j:A, 4m94:A, 4m95:A, 6mig:A, 6mih:A, 6mik:A, 1n4l:A, 1qai:A, 1qai:B, 1qaj:A, 2r2r:A, 2r2s:A, 2r2t:A, 2r2u:A, 7uyn:A, 7uyo:A, 7uyp:A, 5vbs:A, 8wut:E, 8wuv:E, 4xo0:A, 4xpc:A, 4xpe:A, 8ygj:E, 1ztt:A, 1ztw:A
15 8gu0:B 450 44 0.1622 0.0267 0.2727 8.1 8gu0:A
16 5uvc:A 457 43 0.1892 0.0306 0.3256 8.4
17 8gzg:Z 1175 26 0.1351 0.0085 0.3846 8.4
18 8gzh:Z 1217 26 0.1351 0.0082 0.3846 8.6
19 6akd:A 488 25 0.1486 0.0225 0.4400 8.7
20 5k9h:A 554 16 0.1216 0.0162 0.5625 8.7
21 3uzs:A 609 43 0.1892 0.0230 0.3256 9.4 3uzt:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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