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BioLiP
>protein
RSAATREALITGARKLWGLRGYAEVGTPEIATEAGVTRGAMYHQFADKAALFRDVVEVVEQDVMARMATLVAASGAATPA
DAIRAAVDAWLEVSGDPEVRQLILLDAPVVLGWAGFRDVAQRYSLGMTEQLITEAIRAGQLARQPVRPLAQVLIGALDEA
AMFIATADDPKRARRETRQVLRRLIDGMLNG

The query sequence (length=191) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6hs0:B 201 191 1.0000 0.9502 1.0000 1.90e-134 6c31:E, 6c31:F, 6c31:G, 6c31:H, 6c31:A, 6c31:B, 6c31:C, 6c31:D, 6hrw:A, 6hrx:A, 6hrx:B, 6hry:A, 6hry:B, 6hrz:A, 6hs0:A, 6hs1:B, 6hs2:B, 5icj:A, 5icj:B, 5n7o:A, 5n7o:B
2 4i6z:B 200 96 0.1309 0.1250 0.2604 1.50e-06 4i76:A
3 2eh3:A 171 116 0.1414 0.1579 0.2328 2.18e-06
4 3p9t:A 213 167 0.2251 0.2019 0.2575 4.65e-06
5 6en8:C 191 140 0.1571 0.1571 0.2143 7.39e-06 6el2:A, 6el2:B, 6en8:D, 6en8:F, 6en8:A, 6en8:B, 6en8:E
6 4aci:B 177 71 0.1204 0.1299 0.3239 1.47e-05 4aci:A, 4af5:A
7 5h58:B 204 58 0.1204 0.1127 0.3966 1.57e-05 5h58:A, 5h58:C, 5h58:D, 4pxi:A, 4pxi:B, 4pxi:C, 4pxi:D
8 4l62:A 190 101 0.1361 0.1368 0.2574 5.40e-05 4l62:B, 4l62:C, 4l62:D, 4l62:E, 4l62:F, 4l62:G, 4l62:H, 4l62:I, 4l62:J, 4l62:K, 4l62:L, 4l62:M, 4l62:N, 4l62:O, 4l62:P
9 7ju3:B 203 59 0.1152 0.1084 0.3729 5.97e-05 8fw0:A, 8fw0:B, 8fw0:C, 8fw0:D, 8fw3:C, 8fw3:D, 8fw3:A, 8fw3:B, 8fw8:B, 8fw8:C, 8fw8:D, 7jnp:A, 7jnp:B, 7ju3:A, 8ssh:C, 8ssh:D, 8ssh:A, 8ssh:B
10 3whc:A 190 187 0.2251 0.2263 0.2299 2.01e-04 1vi0:A, 1vi0:B, 3whb:A, 3whb:B, 3whc:B, 3whc:C, 3whc:D, 3whc:E, 3whc:F
11 4gct:C 190 47 0.0733 0.0737 0.2979 2.81e-04 4gct:A, 4gct:B, 4gct:D, 5haw:A, 5haw:B
12 3aqt:B 196 53 0.1152 0.1122 0.4151 4.22e-04 3aqt:A
13 7k1c:B 208 64 0.1257 0.1154 0.3750 5.20e-04 7k1a:A, 7k1a:B, 7k1c:A, 7kd8:A, 7kd8:B, 7kd8:D, 7kd8:C, 2uxh:A, 2uxh:B, 2uxi:A, 2uxi:B, 2uxo:B, 2uxp:A, 2uxp:B, 2uxu:A, 2uxu:B
14 6ayi:A 183 63 0.0785 0.0820 0.2381 0.003 6ayi:B, 6ayi:C, 6ayi:D
15 6srn:A 187 53 0.0942 0.0963 0.3396 0.005
16 3qbm:A 199 93 0.1309 0.1256 0.2688 0.008 3qbm:B
17 7eqf:A 184 48 0.0942 0.0978 0.3750 0.009 7eqf:B, 7eqf:C, 7eqf:D
18 8sva:A 200 57 0.1047 0.1000 0.3509 0.011 8suk:D, 8suk:C, 8sva:F, 8sva:G, 8sva:T, 8t5y:A
19 5dy0:A 220 47 0.0681 0.0591 0.2766 0.013 5dy0:B, 5dy0:C, 5dy0:D, 5dy1:A, 5dy1:B, 6gy3:A, 6gy3:B
20 4gcl:B 196 58 0.0733 0.0714 0.2414 0.013 4gck:A, 4gck:B, 4gck:C, 4gck:D, 4gcl:A, 4gcl:C, 4gcl:D, 4gcl:E, 4gcl:G, 4gcl:H, 4gcl:F, 5hbu:A, 5hbu:B, 5hbu:C, 5hbu:D, 5hbu:E, 5hbu:G, 5hbu:H, 5hbu:F, 5hsz:A, 5k58:E, 5k58:F, 5k58:A, 5k58:B
21 6z1b:B 202 114 0.1571 0.1485 0.2632 0.016 4jyk:A, 4jyk:B, 3loc:A, 3loc:B, 3loc:C, 3loc:D, 4xk4:A, 4xk4:B, 4xk4:C, 4xk4:D, 6z1b:A
22 6o6n:A 195 47 0.0890 0.0872 0.3617 0.021 6o6p:A, 6o6p:B
23 6yl2:B 192 75 0.1257 0.1250 0.3200 0.023 6yl2:A
24 8svd:T 197 38 0.0785 0.0761 0.3947 0.040 8sua:A, 8svd:A, 8svd:G, 8svd:F, 8svd:E, 8svd:I, 8svd:J, 8svd:K
25 5k7z:A 185 148 0.1780 0.1838 0.2297 0.048 5k7h:A, 5k7h:B, 5k7z:B, 5k7z:C, 5k7z:D
26 6wp9:E 218 51 0.0785 0.0688 0.2941 0.048 6wp9:A, 6wp9:B, 6wp9:C, 6wp9:D, 6wp9:F, 6wp9:G, 6wp9:H, 6wpa:A, 6wpa:B
27 3ang:C 201 49 0.0890 0.0846 0.3469 0.057 3ang:D, 3ang:A, 3ang:B, 3anp:C, 3anp:D, 3anp:A, 3anp:B
28 1jt0:A 188 48 0.0733 0.0745 0.2917 0.10 3bqz:A, 3br0:A, 3br1:A, 3br2:B, 3br2:A, 3br3:A, 3br5:A, 3br6:A, 3bt9:B, 3bt9:A, 3btc:A, 3bti:A, 3btj:B, 3btj:A, 3btl:A, 2g0e:D, 2gby:A, 1jt0:B, 1jt0:C, 1jt0:D, 1jt6:B, 1jt6:A, 1jtx:A, 1jty:A, 1jum:A, 1jup:A, 1jus:A, 3pm1:A, 1qvt:A, 1qvu:B, 1qvu:A, 1rkw:A, 1rpw:B
29 4jl3:C 182 67 0.1047 0.1099 0.2985 0.12 4jl3:A, 4jl3:B, 4jl3:D
30 6g8g:A 195 58 0.0942 0.0923 0.3103 0.42 6g8g:B, 6g8g:C, 6g8g:D, 6g8h:CCC, 6g8h:BBB
31 2qnx:A 334 46 0.0942 0.0539 0.3913 0.44 2qnx:B, 2qny:A, 2qny:B, 2qnz:A, 2qnz:B, 2qo0:A, 2qo0:B, 2qo1:A, 2qo1:B, 2qx1:A, 2qx1:B, 1u6s:A, 1u6s:B
32 5gpc:A 190 160 0.2042 0.2053 0.2437 0.53 5gpc:B, 5gpc:C, 5gpc:D
33 3lsj:A 205 44 0.0785 0.0732 0.3409 0.58 3lsj:B, 3lsp:A, 3lsr:A
34 5vl9:C 191 111 0.1571 0.1571 0.2703 0.63 5vl9:B, 5vl9:A, 5vl9:D, 5vlg:A, 5vlg:B, 5vlg:C, 5vlg:D, 5vlg:E, 5vlg:F, 5vlg:G, 5vlg:H, 5vlm:A, 5vlm:B, 5vlm:C, 5vlm:D, 5vlm:E, 5vlm:F, 5vlm:G, 5vlm:H
35 2np5:A 187 63 0.0995 0.1016 0.3016 0.78
36 4w97:A 196 89 0.1152 0.1122 0.2472 0.92
37 2whl:A 294 125 0.1728 0.1122 0.2640 1.6
38 8dq6:B 109 40 0.0733 0.1284 0.3500 2.3 8dq6:A, 8dq6:C
39 5yej:C 169 44 0.0785 0.0888 0.3409 2.9 5yej:B, 5yej:A
40 7acm:B 178 76 0.1204 0.1292 0.3026 4.6 7acm:A
41 6ko7:C 186 66 0.1047 0.1075 0.3030 5.8 6ie8:A, 6ie9:A, 6ko7:A, 6ko7:B, 6ko7:D, 6ko9:A, 6ko9:B, 6ko9:C, 6ko9:D, 7n4w:A, 7n4z:A, 7n4z:C, 7n4z:B, 7n4z:D, 7n53:A, 7n53:B, 7n54:A, 7n54:B, 7n54:C, 7n54:D, 3vvy:A, 3vvy:B, 3vvy:C, 3vvy:D, 3vvz:A, 3vvz:B, 3vvz:C, 3vvz:D, 3vw0:B, 3vw0:D, 3vw1:B, 3vw1:D, 3vw2:A, 3vw2:B, 3vw2:C, 3vw2:D
42 6n4n:F 191 24 0.0785 0.0785 0.6250 6.0 6n4n:C

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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