Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
RILPADIKREVLIKDENAETNPDWGFPPEKRPIEMHIQFGVINLDKPPGPTSHEVVAWIKKILNLEKAGHGGTLDPKVSG
VLPVALEKATRVVQALLPAGKEYVALMHLHGDVPEDKIIQVMKEFEGEIIQRLRTRKVYYIEVLEIEGRDVLFRVGVEAG
TYIRSLIHHIGLALGVGAHMSELRRTRSGPFKEDETLITLHDLVDYYYFWKEDGIEEYFRKAIQPMEKAVEHLPKVWIKD
SAVAAVTHGADLAVPGIAKLHAGIKRGDLVAIMTLKDELVALGKAMMTSQEMLEKTKGIAVDVEKVFMPRDWYPKLW

The query sequence (length=317) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2rfk:A 334 327 0.9968 0.9461 0.9664 0.0 3hax:A, 3hay:A, 3hjw:A, 3hjy:A, 2hvy:A, 3lwo:A, 3lwp:A, 3lwq:A, 3lwr:A, 3lwv:A, 3mqk:A
2 8oue:C 394 301 0.3912 0.3147 0.4120 1.96e-71 7bgb:G, 7bgb:C, 8oue:G, 8ouf:C, 8ouf:G, 7trc:G, 7trc:C, 7v9a:C, 7v9a:G
3 1ze1:D 284 274 0.2808 0.3134 0.3248 7.49e-33
4 1ze1:A 308 298 0.2839 0.2922 0.3020 2.82e-30 2ab4:A, 1r3e:A, 1ze1:B, 1ze1:C, 1ze2:A
5 1k8w:A 304 263 0.2240 0.2336 0.2700 4.08e-18 1zl3:A
6 1ze2:B 218 249 0.2114 0.3073 0.2691 2.98e-17
7 5zve:B 384 84 0.1073 0.0885 0.4048 4.43e-07 5zve:A, 5zvg:B, 5zvg:A, 5zvh:B, 5zvh:A
8 5oa3:0 479 60 0.0757 0.0501 0.4000 0.033
9 1iq8:A 577 71 0.0662 0.0364 0.2958 0.16 1iq8:B, 1it7:A, 1it7:B, 1it8:A, 1it8:B, 1j2b:A, 1j2b:B
10 2vf7:B 813 75 0.0694 0.0271 0.2933 0.22 2vf8:A
11 2vf8:B 835 75 0.0694 0.0263 0.2933 0.23 2vf7:A, 2vf7:C
12 7kw7:C 511 122 0.1009 0.0626 0.2623 0.38
13 3fe1:B 387 112 0.0978 0.0801 0.2768 1.5 3fe1:A, 3fe1:C
14 4j8f:A 551 112 0.0946 0.0544 0.2679 3.0 5aqw:A, 5aqx:A, 5aqy:A, 5aqz:A, 5ar0:A, 3atu:A, 3atv:A, 3ay9:A, 5bn8:A, 5bn9:A, 5bpl:A, 5bpm:A, 3d2f:B, 3d2f:D, 2e88:A, 2e8a:A, 7f4x:A, 7f4z:A, 7f50:A, 7fgm:A, 6fhk:A, 6fhk:B, 6g3r:A, 6g3s:A, 3gdq:A, 1hjo:A, 4io8:A, 3jxu:A, 7kw7:D, 5mkr:A, 5mks:A, 7q4r:A, 1s3x:A, 1xqs:C, 1xqs:D, 6zyi:A
15 8wo5:C6 315 82 0.0568 0.0571 0.2195 3.0 8wiw:Z, 8wiw:a, 8wiw:b, 8wiw:c, 8wiw:d, 8wiw:e, 8wiw:f, 8wiw:3, 8wiw:8, 8wiw:AM, 8wiw:AS, 8wiw:AY, 8wiw:Ae, 8wiw:Ak, 8wiw:Aq, 8wiw:Aw, 8wiw:A4, 8wiw:BA, 8wiw:BH, 8wiw:BO, 8wiw:BV, 8wiw:Bc, 8wiw:Bj, 8wiw:Bq, 8wiw:Bx, 8wiw:B5, 8wiw:CB, 8wiw:CI, 8wiw:CP, 8wiw:CW, 8wiw:Cd, 8wiw:Ck, 8wiw:Cr, 8wiw:Cy, 8wo5:DB, 8wo5:Em, 8wo5:DD, 8wo5:D7, 8wo5:DJ, 8wo5:DQ, 8wo5:DW, 8wo5:Dc, 8wo5:Di, 8wo5:Do, 8wo5:Du, 8wo5:D1, 8wo5:B5, 8wo5:By, 8wo5:EE, 8wo5:EK, 8wo5:EQ, 8wo5:EW, 8wo5:Ba, 8wo5:Bg, 8wo5:Bm, 8wo5:Bs, 8wo5:CA, 8wo5:CG, 8wo5:CM, 8wo5:CS, 8wo5:CY, 8wo5:Ce, 8wo5:Ck, 8wo5:Cq, 8wo5:Cw, 8wo5:Ea, 8wo5:Eg, 8woe:DG, 8woe:EC, 8woe:CB, 8woe:B5, 8woe:EJ, 8woe:EQ, 8woe:EX, 8woe:Bc, 8woe:Bj, 8woe:Bq, 8woe:Bx, 8woe:Ex, 8woe:CI, 8woe:CP, 8woe:CW, 8woe:Cd, 8woe:Ck, 8woe:Cr, 8woe:Cy, 8woe:Ey, 8woe:Ez, 8woe:E1, 8woe:E2, 8woe:E3, 8woe:E4, 8woe:C6, 8woe:DA, 8woe:DY, 8woe:De, 8woe:Dk, 8woe:Dq, 8woe:Dw, 8woe:D3, 8woe:D9, 8xp0:M, 8xp0:Y, 8xp0:S, 8xp1:Z, 8xp1:a, 8xp1:b, 8yjt:k, 8yjt:Cw, 8yjt:q, 8yjt:w, 8yjt:3, 8yjt:9, 8yjt:AE, 8yjt:AK, 8yjt:AQ, 8yjt:AW, 8yjt:Ac, 8yjt:Ai, 8yjt:Ao, 8yjt:Au, 8yjt:A1, 8yjt:A7, 8yjt:BC, 8yjt:BI, 8yjt:BO, 8yjt:BU, 8yjt:Ba, 8yjt:Bg, 8yjt:Bm, 8yjt:Bs, 8yjt:By, 8yjt:B5, 8yjt:CA, 8yjt:CG, 8yjt:CM, 8yjt:CS, 8yjt:CY, 8yjt:Ce, 8yjt:Ck, 8yjt:Cq
16 2v9k:A 467 59 0.0473 0.0321 0.2542 4.0
17 5x68:B 354 46 0.0473 0.0424 0.3261 4.5 5x68:A
18 2xg4:A 216 65 0.0536 0.0787 0.2615 5.0 2j7l:A, 2xg5:A
19 3hm8:A 441 51 0.0536 0.0385 0.3333 5.0 3hm8:B, 3hm8:C, 3hm8:D
20 2ewb:A 486 211 0.1640 0.1070 0.2464 7.2 1bll:E, 1bpm:A, 1bpn:A, 2j9a:A, 1lam:A, 1lan:A, 1lap:A, 1lcp:A, 1lcp:B
21 7sxo:F 549 45 0.0505 0.0291 0.3556 7.8 7sxo:A, 7sxo:E, 7sxo:B, 7sxo:C, 7sxo:D
22 4mz0:B 823 81 0.0789 0.0304 0.3086 7.9
23 1n5z:A 71 26 0.0347 0.1549 0.4231 8.0 1n5z:B, 2v1r:B, 2v1r:A
24 7k0n:A 464 89 0.0820 0.0560 0.2921 8.4 7cqi:S, 7cqk:S, 7k0i:A, 7k0i:D, 7k0j:A, 7k0k:A, 7k0l:A, 7k0n:E, 7k0o:A, 7k0o:E, 7k0p:A, 7k0p:E, 7k0q:A, 6m4n:A, 6m4n:E, 7yiy:A, 7yj2:A
25 8rqr:A 511 77 0.0631 0.0391 0.2597 9.1 7aci:A, 8aq3:A, 8aq4:A, 8b0n:A, 8b0o:A, 8b0p:A, 8q2p:A, 5vrg:A, 5vrh:A

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218