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BioLiP
>protein
RFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNRE
WEFQKY

The query sequence (length=86) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2lgv:A 100 86 0.9535 0.8200 0.9535 1.59e-56 4a0c:D, 8b3g:R, 8b3i:R, 7b5l:R, 7b5m:R, 7b5n:R, 7b5s:R, 8cdk:R, 3dpl:R, 3dqv:R, 3dqv:Y, 4f52:B, 4f52:D, 8gq6:E, 8gq6:D, 8h33:D, 8h33:K, 8h33:L, 8h33:E, 8h34:R, 8h34:Q, 8h34:E, 8h34:D, 8h34:L, 8h34:K, 8h35:E, 8h35:D, 8h35:L, 8h35:K, 8h35:R, 8h35:Q, 8h35:W, 8h35:X, 8h36:E, 8h36:D, 8h37:E, 8h37:D, 8h37:R, 8h37:Q, 8h38:R, 8h3a:R, 8h3f:R, 8h3q:E, 8h3r:E, 8h3r:D, 2hye:D, 8jaq:R, 8jaq:V, 8jas:R, 8jas:V, 8jav:R, 8jav:V, 1ldj:B, 1ldk:C, 5n4w:R, 8or0:B, 8or2:B, 8or3:B, 4p5o:B, 4p5o:D, 7plo:T, 8pql:K, 8q7h:C, 8q7h:D, 8q7r:R, 8qu8:E, 8r5h:R, 6r7i:R, 6r7n:R, 8rhz:C, 8rhz:D, 3rtr:B, 3rtr:D, 3rtr:F, 3rtr:H, 8rwz:R, 8rx0:R, 6ttu:R, 1u6g:B, 8wqa:J, 8wqa:I, 8wqb:I, 8wqb:E, 8wqc:F, 8wqc:J, 8wqe:J, 8wqe:I, 8wqf:I, 8wqf:E, 8wqg:F, 8wqg:J, 8wqh:J, 8wqh:B, 7z8b:R, 7z8r:R, 7z8t:R, 7z8v:R, 7zbz:R
2 4a0c:F 80 86 0.8837 0.9500 0.8837 4.73e-50 8ij1:R, 7shk:R
3 7oni:R 86 84 0.4884 0.4884 0.5000 9.25e-26 2ecl:A, 6v9i:R
4 5a31:B 84 88 0.3953 0.4048 0.3864 5.32e-18 5g04:B, 5g05:B, 9gaw:C, 5jg6:A, 5jg6:D, 2mt5:A, 7qe7:C, 4r2y:A, 4r2y:B, 4r2y:C, 4r2y:D, 8s4g:C, 6tm5:B, 6tnt:B, 4ui9:B
5 8a3t:U 114 90 0.3256 0.2456 0.3111 1.13e-10 8a5y:U
6 2ep4:A 74 24 0.1628 0.1892 0.5833 1.72e-04
7 6w7z:B 71 22 0.1279 0.1549 0.5000 0.001 6w9a:B, 6w9a:D, 6w9d:B, 6w9d:E, 6w9d:H
8 1x4j:A 75 22 0.1279 0.1467 0.5000 0.002
9 4v3k:C 75 22 0.1279 0.1467 0.5000 0.003 7ojx:A, 4v3k:F, 4v3l:C
10 1iym:A 55 47 0.1860 0.2909 0.3404 0.003
11 6a3z:A 56 21 0.1163 0.1786 0.4762 0.034
12 1chc:A 68 22 0.1279 0.1618 0.5000 0.042
13 7t92:C 317 26 0.1279 0.0347 0.4231 0.046
14 5din:B 124 30 0.1163 0.0806 0.3333 0.077 5din:A
15 5zbu:A 74 23 0.1279 0.1486 0.4783 0.084 5zbu:D, 5zc4:A, 5zc4:D
16 2ect:A 78 22 0.1279 0.1410 0.5000 0.098
17 6f98:A 78 22 0.0930 0.1026 0.3636 0.19
18 2kiz:A 69 30 0.1395 0.1739 0.4000 0.28 5lg0:A, 5lg7:A, 7p2k:A
19 2l0b:A 91 22 0.1163 0.1099 0.4545 0.36
20 2c53:A 228 36 0.1512 0.0570 0.3611 0.47 2c56:A, 1lau:E, 1udh:A
21 7r70:A 150 44 0.1512 0.0867 0.2955 0.87 5d0i:A, 5d0i:B, 5d0k:C, 5d0k:F, 5d0k:I, 5d0k:L, 7r70:B, 7r71:A
22 3kic:A 520 34 0.1512 0.0250 0.3824 1.2 3kic:B, 3kic:C, 3kic:D, 3kic:E, 3kic:F, 3kic:G, 3kic:H, 3kic:I, 3kic:J, 3kic:K, 3kic:L, 3kic:M, 3kic:N, 3kic:O, 3kic:P, 3kic:Q, 3kic:R, 3kic:S, 3kic:T, 3kie:A, 3kie:B, 3kie:C, 3kie:D, 3kie:E, 3kie:F, 3kie:G, 3kie:H, 3kie:I, 3kie:J, 3kie:K, 3kie:L, 3kie:M, 3kie:N, 3kie:O, 3kie:P, 3kie:Q, 3kie:R, 3kie:S, 3kie:T
23 2lxh:C 58 44 0.1279 0.1897 0.2500 1.2 2lxp:C
24 5d0m:C 60 41 0.1395 0.2000 0.2927 1.4 5ulh:C, 5ulk:C
25 4lad:B 69 21 0.1047 0.1304 0.4286 1.7
26 8adl:A 633 23 0.1163 0.0158 0.4348 1.8 8adl:I
27 4orh:H 142 32 0.1163 0.0704 0.3125 2.3 4ayc:A, 4ayc:B, 4orh:C, 4orh:G, 4orh:K, 4orh:L, 4whv:C, 4whv:D, 4whv:I, 4whv:J
28 4rso:A 520 34 0.1512 0.0250 0.3824 2.3
29 7l5u:A 520 34 0.1512 0.0250 0.3824 2.8 7l5u:B, 7l5u:C, 7l5u:D, 7l5u:E, 7l5u:F, 7l5u:G, 7l5u:H, 7l5u:I, 7l5u:J, 7l5u:K, 7l5u:L, 7l5u:M, 7l5u:N, 7l5u:O, 7l5u:P, 7l5u:Q, 7l5u:R, 7l5u:S, 7l5u:T, 7l5u:U, 7l5u:V, 7l5u:W, 7l5u:X, 7l5u:Y, 7l5u:Z, 7l5u:a, 7l5u:b, 7l5u:c, 7l5u:d, 7l5u:e, 7l5u:f, 7l5u:g, 7l5u:h, 7l5u:i, 7l5u:j, 7l5u:k, 7l5u:l, 7l5u:m, 7l5u:n, 7l5u:o, 7l5u:p, 7l5u:q, 7l5u:r, 7l5u:s, 7l5u:t, 7l5u:u, 7l5u:v, 7l5u:w, 7l5u:x, 7l5u:y, 7l5u:z, 7l5u:1, 7l5u:2, 7l5u:3, 7l5u:4, 7l5u:5, 7l5u:6, 7l5u:7, 7l5u:8
30 5egc:A 520 34 0.1512 0.0250 0.3824 2.9 3ng9:A, 3ng9:B, 3ng9:C, 3ng9:D, 3ng9:E, 3ng9:F, 3ng9:G, 3ng9:H, 3ng9:I, 3ng9:J, 3oah:A
31 8aaf:e 1527 63 0.1860 0.0105 0.2540 3.2 8agt:e, 8agu:e, 8agv:e, 8agw:e, 8agx:e, 8agz:e
32 7bvw:A 79 14 0.1047 0.1139 0.6429 3.4 7bvw:B
33 6u0r:A 527 34 0.1395 0.0228 0.3529 4.5 8fyw:A, 8fyw:B, 8fyw:C, 8fyw:D, 8fyw:E, 8fyw:F, 8fyw:G, 8fyw:H, 8fyw:I, 8fyw:J, 8fyw:K, 8fyw:L, 8fyw:M, 8fyw:N, 8fyw:O, 8fyw:P, 8fyw:Q, 8fyw:R, 8fyw:S, 8fyw:T, 8fyw:U, 8fyw:V, 8fyw:W, 8fyw:X, 8fyw:Y, 8fyw:Z, 8fyw:a, 8fyw:b, 8fyw:c, 8fyw:d, 8fyw:e, 8fyw:f, 8fyw:g, 8fyw:h, 8fyw:i, 8fyw:j, 8fyw:k, 8fyw:l, 8fyw:m, 8fyw:n, 8fyw:o, 8fyw:p, 8fyw:q, 8fyw:r, 8fyw:s, 8fyw:t, 8fyw:u, 8fyw:v, 8fyw:w, 8fyw:x, 8fyw:y, 8fyw:z, 8fyw:1, 8fyw:2, 8fyw:3, 8fyw:4, 8fyw:5, 8fyw:6, 8fyw:7, 8fyw:8, 3j4p:A, 7kfr:A, 7l6h:A, 7l6h:B, 7l6h:C, 7l6h:D, 7l6h:E, 7l6h:F, 7l6h:G, 7l6h:H, 7l6h:I, 7l6h:J, 7l6h:K, 7l6h:L, 7l6h:M, 7l6h:N, 7l6h:O, 7l6h:P, 7l6h:Q, 7l6h:R, 7l6h:S, 7l6h:T, 7l6h:U, 7l6h:V, 7l6h:W, 7l6h:X, 7l6h:Y, 7l6h:Z, 7l6h:a, 7l6h:b, 7l6h:c, 7l6h:d, 7l6h:e, 7l6h:f, 7l6h:g, 7l6h:h, 7l6h:i, 7l6h:j, 7l6h:k, 7l6h:l, 7l6h:m, 7l6h:n, 7l6h:o, 7l6h:p, 7l6h:q, 7l6h:r, 7l6h:s, 7l6h:t, 7l6h:u, 7l6h:v, 7l6h:w, 7l6h:x, 7l6h:y, 7l6h:z, 7l6h:1, 7l6h:2, 7l6h:3, 7l6h:4, 7l6h:5, 7l6h:6, 7l6h:7, 7l6h:8, 6u0r:B, 6u0r:C, 6u0r:D, 6u0r:E, 6u0r:F, 6u0r:G, 6u0r:H, 6u0r:I, 6u0r:J, 6u0r:K, 6u0r:L, 6u0r:M, 6u0r:N, 6u0r:O, 6u0r:P, 6u0r:Q, 6u0r:R, 6u0r:S, 6u0r:T, 6u0r:U, 6u0r:V, 6u0r:W, 6u0r:X, 6u0r:Y, 6u0r:Z, 6u0r:a, 6u0r:b, 6u0r:c, 6u0r:d, 6u0r:e, 6u0r:f, 6u0r:g, 6u0r:h, 6u0r:i, 6u0r:j, 6u0r:k, 6u0r:l, 6u0r:m, 6u0r:n, 6u0r:o, 6u0r:p, 6u0r:q, 6u0r:r, 6u0r:s, 6u0r:t, 6u0r:u, 6u0r:v, 6u0r:w, 6u0r:x, 6u0r:y, 6u0r:z, 6u0r:1, 6u0r:2, 6u0r:3, 6u0r:4, 6u0r:5, 6u0r:6, 6u0r:7, 6u0r:8, 5uf6:A
34 6wi7:A 206 22 0.1163 0.0485 0.4545 4.7 2ckl:A, 8grm:M, 2h0d:A, 7nd1:H, 8pp7:K, 8pp7:M, 4r8p:K, 4r8p:M, 3rpg:B, 6wi8:A, 6wi8:B
35 5mwl:A 421 27 0.1163 0.0238 0.3704 6.2 5mw8:A, 5mwl:B, 5mwm:A
36 7uhy:D 288 55 0.1860 0.0556 0.2909 8.3
37 7uhy:C 578 54 0.1628 0.0242 0.2593 9.9

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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