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BioLiP
>protein
QNPLPTRFEVELEFIQSLANIQYVTYLLTQQQIWKSPNFKNYLKYLEYWCNPPYSQCIVYPNCLFILKLLNGFMESAIVN
EDGLLEGLDELP

The query sequence (length=92) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 7ui9:w 103 90 0.9022 0.8058 0.9222 8.29e-54 5sva:X, 7uif:w, 7uig:w, 7uio:Aw, 7uio:Bw
2 4dq1:A 312 35 0.1630 0.0481 0.4286 3.7 4dq1:B
3 4pbp:B 210 26 0.1087 0.0476 0.3846 4.8 4pbp:A, 4pbp:C
4 1d8d:A 323 75 0.1848 0.0526 0.2267 4.9 2bed:A, 1d8e:A, 3dpy:A, 3e33:A, 3e34:A, 3e37:A, 3eu5:A, 2f0y:A, 1fpp:A, 4gtr:A, 2h6f:A, 2h6g:A, 2h6h:A, 2h6i:A, 2iej:A, 1jcq:A, 1jcr:A, 1jcs:A, 3ksl:A, 1ld7:A, 1ld8:A, 1mzc:A, 1n4r:A, 1n4r:C, 1n4r:G, 1n94:A, 1ni1:A, 1o1r:A, 1o1t:A, 1o5m:A, 1qbq:A, 7rni:A, 1s63:A, 1sa4:A, 1sa5:A, 1tn6:A, 1tn7:A, 1tnb:A, 1tnb:E, 1tnb:G, 1tnb:C, 1tnb:I, 1tnb:K, 1tno:A, 1tno:C, 1tno:E, 1tno:G, 1tno:I, 1tno:K, 1tnu:A, 1tnu:C, 1tnu:E, 1tnu:G, 1tnu:I, 1tnu:K, 1tny:A, 1tny:C, 1tny:E, 1tny:G, 1tny:I, 1tny:K, 1tnz:C, 1tnz:I, 1tnz:A, 1tnz:E, 1tnz:K, 2zir:A, 2zis:A
5 8kgg:R 290 27 0.1196 0.0379 0.4074 5.3
6 7v2c:p 178 67 0.1957 0.1011 0.2687 7.0 5gup:p, 5lnk:t, 8q0a:n, 8q0f:n, 8q0j:n, 8q0m:n, 8q0o:n, 8q0q:n, 8q1p:n, 8q1u:n, 8q1y:n, 8q25:n, 8q45:n, 8q46:n, 8q47:n, 8q48:n, 8q49:n, 8q4a:n, 6q9b:B9, 6qa9:B9, 6qbx:B9, 6qc2:B9, 6qc3:B9, 6qc4:B9, 6qc5:B9, 6qc6:B9, 6qc7:B9, 6qc8:B9, 6qca:B9, 6qcf:B9, 7qsd:n, 7qsk:n, 7qsl:n, 7qsm:n, 7qsn:n, 7qso:n, 7r41:n, 7r42:n, 7r43:n, 7r44:n, 7r45:n, 7r46:n, 7r47:n, 7r48:n, 7r4c:n, 7r4d:n, 7r4f:n, 7r4g:n, 8ud1:1n, 8ueo:1n, 8uep:1n, 8ueq:1n, 8uer:1n, 8ues:1n, 8uet:1n, 8ueu:1n, 8uev:1n, 8uew:1n, 8uex:1n, 8uey:1n, 8uez:1n, 8ugh:1n, 8ugi:1n, 8ugj:1n, 8ugn:1n, 8ugn:5n, 8ugr:1n, 8ugr:5n, 7v2d:p, 7v2e:p, 7v2f:p, 7v2h:p, 7v2k:p, 7v2r:p, 7v30:p, 7v31:p, 7v32:p, 7v33:p, 7v3m:p, 7vbl:p, 7vbp:p, 7vc0:p, 7vwl:p, 7vxs:p, 7vy1:p, 7vy9:p, 7vye:p, 7vyg:p, 7vyi:p, 7vys:p, 7vz8:p, 7vzv:p, 7vzw:p, 7w00:p, 7w0h:p, 7w0r:p, 7w0y:p, 7w1o:p, 7w1p:p, 7w1t:p, 7w1u:p, 7w1v:p, 7w1z:p, 7w20:p, 7w2k:p, 7w2l:p, 7w2r:p, 7w2u:p, 7w2y:p, 7w31:p, 7w32:p, 7w35:p, 7w4c:p, 7w4d:p, 7w4e:p, 7w4f:p, 7w4g:p, 7w4j:p, 7w4k:p, 7w4l:p, 7w4m:p, 7w4n:p, 7w4q:p, 5xtc:p, 5xtd:p, 5xth:p, 5xti:p, 5xti:Bp, 7zd6:t, 7zdh:t, 7zdj:t, 7zdm:t, 7zdp:t, 7zeb:t, 6zka:t, 6zkb:t, 6zkc:t, 6zkd:t, 6zke:t, 6zkf:t, 6zkg:t, 6zkh:t, 6zki:t, 6zkj:t, 6zkk:t, 6zkl:t, 6zkm:t, 6zkn:t, 6zko:t, 6zkp:t, 6zkq:t, 6zkr:t, 6zks:t, 6zkt:t, 6zku:t, 6zkv:t
7 7yca:O 96 38 0.1196 0.1146 0.2895 7.6
8 6q2e:A 330 21 0.0978 0.0273 0.4286 7.6 6q2d:A, 6q2d:B, 6q2e:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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