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BioLiP
>protein
QKPPYSYVALIAMAIRESAEKRLTLSGIYQYIIAKFPFYEKNKKGWQNSIRHNLSLNECFIKVPREGGGERKGNYWTLDP
ACEDMFEKGNYRR

The query sequence (length=93) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7vov:A 93 93 1.0000 1.0000 1.0000 2.89e-67 7vou:C, 7vov:B
2 6ako:C 97 92 0.6452 0.6186 0.6522 6.76e-44 6akp:C, 6lbm:C, 6o3t:A, 6o3t:B
3 2hdc:A 97 92 0.6237 0.5979 0.6304 7.48e-42
4 7cby:C 100 89 0.6237 0.5800 0.6517 2.79e-41
5 8vfy:O 102 92 0.5591 0.5098 0.5652 3.15e-35 8vfz:O, 8vfz:P, 8vg1:O, 8vg2:O, 7vox:A, 7vox:C, 7vox:H, 7vox:B, 1vtn:C
6 7yze:A 87 79 0.5161 0.5517 0.6076 1.88e-33 5x07:F, 5x07:C, 5x07:L, 5x07:I, 7yzf:C
7 8bzm:E 95 92 0.5054 0.4947 0.5109 1.41e-30 8bzm:I, 8bzm:A, 8bzm:J
8 2c6y:A 98 92 0.5161 0.4898 0.5217 1.77e-30 2c6y:B
9 7yza:A 122 79 0.4624 0.3525 0.5443 2.75e-26 7yz7:A, 7yzc:A, 7yzd:A
10 7yzg:A 121 79 0.4301 0.3306 0.5063 3.62e-24
11 6ncm:A 91 79 0.4194 0.4286 0.4937 1.14e-23 6nce:A, 6ncm:B
12 7yzb:A 125 79 0.3978 0.2960 0.4684 1.29e-23
13 3g73:B 95 83 0.3978 0.3895 0.4458 1.71e-21 7fj2:A, 7fj2:B, 7fj2:E, 7fj2:F, 3g73:A
14 2a07:J 83 78 0.3441 0.3855 0.4103 2.91e-20 2a07:K, 2a07:F, 2a07:G, 2a07:H, 2a07:I, 2as5:F, 2as5:G
15 3co6:C 91 80 0.4194 0.4286 0.4875 3.06e-20 3co7:C, 3co7:F, 3coa:C, 3coa:F, 5dui:A, 5dui:B, 6lbi:C, 6lbi:D, 6lbi:G, 6lbi:H, 6lbi:K, 6lbi:L, 4lg0:A
16 6el8:A 89 83 0.4086 0.4270 0.4578 1.31e-19 6el8:D
17 3qrf:G 82 78 0.3656 0.4146 0.4359 2.52e-19 3qrf:F, 3qrf:H, 3qrf:I, 4wk8:F, 4wk8:G
18 7tdw:A 90 79 0.3441 0.3556 0.4051 4.09e-18 8sro:A, 8sro:C, 8sro:D, 8sro:B, 8srp:J, 8srp:G, 8srp:E, 8srp:D, 8srp:B, 8srp:A, 8srp:F, 8srp:C, 7tdx:A
19 2uzk:A 97 80 0.3763 0.3608 0.4375 3.68e-17 2uzk:C
20 3l2c:A 85 79 0.3763 0.4118 0.4430 3.75e-17
21 6r5k:A 1040 53 0.1720 0.0154 0.3019 3.1 4q8h:A, 6r9m:A, 6r9p:A, 6r9q:A
22 1k9y:A 354 15 0.1075 0.0282 0.6667 8.3 1k9z:A, 1ka0:A, 1ka1:A, 1qgx:A
23 8dvm:A 612 57 0.1398 0.0212 0.2281 9.9 4a0p:A, 8dvl:A, 8dvn:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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