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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
QEHKVIIVGLDNAGKTTILYQFSMNEVVHTVEEIVINNTRFLMWDIGSSWNTYYTNTEFVIVVVDSTDRERISVTREELY
KMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL

The query sequence (length=149) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1zj6:A 173 158 1.0000 0.8613 0.9430 6.04e-105 2h16:A, 2h16:B, 2h16:C, 2h16:D, 2h17:A, 1z6y:A, 1z6y:B
2 1yzg:A 168 158 0.8121 0.7202 0.7658 2.45e-87
3 5uf8:D 160 158 0.5101 0.4750 0.4810 5.88e-49
4 2k5u:A 181 162 0.5168 0.4254 0.4753 1.14e-48 2ksq:A, 1mr3:F, 4q66:F, 4q66:L, 3tjz:A, 3tjz:D
5 8d4c:C 180 162 0.4966 0.4111 0.4568 1.06e-47 8d4c:H, 8d4c:D, 8d4c:F, 8d4d:C, 8d4d:H, 8d4d:D, 8d4d:F, 8d4e:C, 8d4e:H, 8d4e:Z, 8d4f:C, 8d4f:H, 8d4f:Z, 8d4f:D, 8d4f:F, 8d4f:Q, 8d4g:C, 8d4g:H, 8d4g:Z, 8d4g:D, 8d4g:F, 8d4g:Q, 8d9r:C, 8d9r:H, 8d9r:Z, 8d9r:J, 8d9r:X, 8d9r:3, 8d9r:K, 8d9r:a, 8d9r:4, 8d9r:O, 8d9r:b, 8d9r:5, 8d9r:P, 8d9r:c, 8d9r:6, 8d9r:Q, 8d9r:d, 8d9r:7, 8d9s:C, 8d9s:H, 8d9s:Z, 8d9s:J, 8d9s:X, 8d9s:3, 8d9s:K, 8d9s:a, 8d9s:4, 8d9s:O, 8d9s:b, 8d9s:5, 8d9s:P, 8d9s:c, 8d9s:6, 8d9s:Q, 8d9s:d, 8d9s:7, 8d9t:C, 8d9t:H, 8d9t:J, 8d9t:X, 8d9t:K, 8d9t:Z, 8d9t:O, 8d9t:a, 8d9t:P, 8d9t:b, 8d9t:Q, 8d9t:c, 8d9u:C, 8d9u:H, 8d9u:J, 8d9u:X, 8d9u:K, 8d9u:Z, 8d9u:O, 8d9u:a, 8d9u:P, 8d9u:b, 8d9u:Q, 8d9u:c, 8d9v:C, 8d9v:H, 8d9v:D, 8d9v:F, 8d9w:F, 8d9w:I, 1hur:A, 1hur:B, 7ux3:C, 7ux3:H
6 4y0v:A 165 156 0.4631 0.4182 0.4423 1.13e-47 4y0v:B, 4ylg:A, 4ylg:B
7 6pta:A 165 156 0.4832 0.4364 0.4615 9.21e-47 6pta:B, 6pta:C, 6pta:D, 5uf8:A, 5uf8:B, 5uf8:C
8 3o47:A 289 157 0.4966 0.2561 0.4713 2.47e-46 4c0a:C, 4c0a:D, 4c0a:G, 4c0a:H, 6cm9:C, 6cm9:H, 6cri:C, 6cri:H, 6cri:K, 6cri:U, 6cri:L, 6cri:V, 6d83:C, 6d83:H, 6d84:C, 6d84:H, 6d84:I, 6d84:N, 6dff:C, 6dff:H, 7dn8:D, 7dn8:B, 7dn8:F, 7dn8:H, 7dn9:B, 7dn9:D, 7dn9:F, 7dn9:H, 3dwd:A, 3dwd:B, 4hmy:C, 6ii6:C, 6ii6:D, 1j2j:A, 2j59:A, 2j59:B, 2j59:C, 2j59:D, 2j59:E, 2j59:F, 7mge:E, 1o3y:A, 1o3y:B, 3o47:B, 8p50:B, 7r4h:C, 7r4h:H, 1r8q:A, 1r8q:B, 1r8s:A, 1re0:A, 1rrf:A, 1rrg:A, 1rrg:B, 1s9d:A, 8sdw:A, 1u81:A, 7wqy:A, 7wqy:B
9 3aq4:A 170 152 0.4698 0.4118 0.4605 1.00e-45 3aq4:B
10 3lrp:A 181 159 0.4698 0.3867 0.4403 2.25e-45
11 1upt:G 170 162 0.4765 0.4176 0.4383 4.45e-44 4dcn:A, 4dcn:B, 5ee5:B, 5j5c:A, 1r4a:A, 1r4a:B, 1r4a:C, 1r4a:D, 1upt:A, 1upt:C, 1upt:E
12 2b6h:A 171 157 0.4564 0.3977 0.4331 1.26e-42
13 1z6x:A 175 162 0.4631 0.3943 0.4259 1.45e-42 1z6x:B
14 1moz:A 178 155 0.4564 0.3820 0.4387 2.82e-42 8ezj:C, 8ezj:D, 1moz:B
15 3lvq:E 420 160 0.4430 0.1571 0.4125 7.73e-40 2b0o:E, 2b0o:F, 2b0o:G, 2b0o:H, 3lvr:E
16 2x77:A 181 159 0.4430 0.3646 0.4151 2.73e-39 2x77:B
17 6a8d:A 181 162 0.4362 0.3591 0.4012 4.50e-39
18 6bbp:A 520 160 0.4430 0.1269 0.4125 5.50e-39 2a5d:A, 2a5f:A, 2a5g:A, 6bbq:A, 1e0s:A, 1fgy:A, 1fhw:A, 1fhw:B, 1fhx:A, 1fhx:B, 4fme:C, 4fme:F, 2j5x:A, 2j5x:B, 4kax:A, 4kax:B, 3n5c:A, 3n5c:B, 3pcr:B, 2r09:A, 2r09:B, 2r0d:A, 2r0d:B, 3vhx:A, 3vhx:C, 3vhx:E, 3vhx:G, 2w83:A, 2w83:B, 2w83:E, 7xrd:A, 7xrd:B, 7xrd:C, 7xrd:D
19 5de3:A 166 159 0.4027 0.3614 0.3774 5.68e-35 5di3:A
20 4v0l:A 168 160 0.4094 0.3631 0.3812 6.00e-35 4v0k:A, 4v0k:B, 4v0l:B, 4v0m:A, 4v0m:C, 4v0m:E, 4v0m:G, 4v0n:A, 4v0n:C, 4v0n:E, 4v0n:G, 4v0o:A, 4v0o:C, 4v0o:E, 4v0o:G
21 3doe:A 189 160 0.4295 0.3386 0.4000 2.52e-34 3dof:A, 4gok:B, 4gok:A, 1ksg:A, 1ksh:A, 1ksj:A
22 4q66:C 134 149 0.4497 0.5000 0.4497 1.69e-33
23 4zi2:A 185 158 0.4094 0.3297 0.3861 1.82e-31 3bh6:A, 3bh7:A, 1fzq:A, 4goj:A, 4goj:B, 7ok7:A, 7ok7:B, 7ok7:C, 7ok7:D, 7ok7:E, 7ok7:F, 4zi2:B, 4zi3:A, 4zi3:B
24 2h57:B 167 166 0.3826 0.3413 0.3434 3.85e-30 2h57:A, 2h57:C, 6vbv:3
25 7rll:B 177 161 0.3490 0.2938 0.3230 1.62e-27 7rll:A
26 4bas:A 172 161 0.3960 0.3430 0.3665 4.07e-27
27 8oun:A 181 165 0.3624 0.2983 0.3273 1.17e-24 8oum:A, 8oum:B, 8oum:C, 8oum:D, 8oum:E, 8oun:B
28 8oul:A 185 162 0.3691 0.2973 0.3395 2.69e-23 8ouk:A, 8oul:B, 8oul:C
29 8e0a:A 168 154 0.2953 0.2619 0.2857 9.49e-18 8e0b:A
30 6zga:C 168 162 0.2819 0.2500 0.2593 3.52e-16 8bsh:B, 4bzi:B, 4bzi:J, 4bzi:K, 6gni:B, 1m2o:B, 1m2o:D, 2qtv:B, 6zga:G
31 8e0c:A 185 167 0.2953 0.2378 0.2635 6.34e-15 8e0a:B, 8e0b:B, 8e0d:A, 1f6b:A, 1f6b:B, 2fa9:A, 2fa9:B, 2fmx:A, 2fmx:B
32 4ile:A 176 145 0.2617 0.2216 0.2690 3.41e-13 2al7:A, 2h18:A, 8jc5:A, 8jc5:B, 8jca:A, 1zd9:A
33 5di3:B 204 162 0.2819 0.2059 0.2593 7.71e-13 4m9q:A, 4m9q:B, 4m9q:C
34 8e0h:A 179 163 0.2550 0.2123 0.2331 9.29e-12 8dzm:A, 8dzm:B, 8dzn:A, 8dzn:B, 8dzo:A, 8dzo:B, 8dzt:A, 8dzt:B, 8e0h:B, 2gao:A, 2gao:B
35 4q66:I 86 136 0.3087 0.5349 0.3382 1.52e-07
36 8xql:A 240 112 0.2013 0.1250 0.2679 8.53e-07
37 2kwi:A 178 146 0.2483 0.2079 0.2534 1.08e-05 2ke5:A, 6zqt:A, 6zqt:B, 6zrn:A, 6zrn:B
38 6vs4:A 223 116 0.1946 0.1300 0.2500 4.75e-05 6vs4:B
39 5xc3:A 168 126 0.2349 0.2083 0.2778 2.57e-04 5xc5:A
40 8fn0:B 212 138 0.2148 0.1509 0.2319 8.54e-04
41 2il1:A 163 127 0.2617 0.2393 0.3071 0.006
42 6l6o:A 165 127 0.1946 0.1758 0.2283 0.060 8jqu:A
43 2dyk:A 150 50 0.1208 0.1200 0.3600 0.063 2dyk:B
44 8tzh:A 1485 111 0.1879 0.0189 0.2523 0.12 3d6t:B
45 2bov:A 173 127 0.1946 0.1676 0.2283 0.13 2a78:A, 2a9k:A, 8fjh:B, 8fji:B, 6p0i:B, 6p0j:B, 6p0k:B, 6p0l:B, 6p0m:B, 6p0n:B, 6p0o:B, 1u8y:A, 1u8y:B, 1u8z:A, 1u8z:B, 1u90:A, 1u90:B, 1uad:A, 1uad:B, 1zc3:A, 1zc3:C, 1zc4:A, 1zc4:C
46 2hup:A 162 121 0.2013 0.1852 0.2479 0.18 2hup:B
47 8unx:A 244 116 0.1946 0.1189 0.2500 0.23 7f1o:A, 7f1z:A, 7f23:A, 7f24:A, 5g53:C, 8gfv:A, 8gfw:A, 8gfx:A, 8gfy:A, 8gfz:A, 8gg0:A, 8gg1:A, 8gg2:A, 8gg3:A, 8gg4:A, 8gg5:A, 8gg6:A, 8gg7:A, 8gg8:A, 8gw8:A, 8jr9:A, 8unl:A, 8unm:A, 8unn:A, 8uno:A, 8unp:A, 8unq:A, 8unr:A, 8uns:A, 8unt:A, 8unu:A, 8unv:A, 8unw:A, 8uny:A, 8unz:A, 8uo0:A, 7vui:A, 7vuj:A
48 3ref:B 180 77 0.1409 0.1167 0.2727 0.32 4dvg:A, 3ref:A, 3reg:A, 3reg:B
49 2o52:A 167 143 0.2282 0.2036 0.2378 0.34 2o52:B
50 6cu6:C 151 104 0.1611 0.1589 0.2308 0.36 8afc:B, 3lo5:A, 4m1s:C, 4m21:C, 6mta:C, 8t72:C, 6vc8:C, 2x1v:A
51 6y09:A 176 128 0.2013 0.1705 0.2344 0.46 2g77:B, 6sur:A, 6sur:B, 6sur:C, 6sur:D, 6sur:E, 6sur:F, 6y09:B, 1z06:A, 6zay:A, 6zay:B
52 2oil:A 174 124 0.2013 0.1724 0.2419 0.50 3tso:A, 3tso:B
53 4lhv:E 148 111 0.1812 0.1824 0.2432 0.75
54 1mky:A 407 97 0.1745 0.0639 0.2680 1.1
55 3q85:B 151 107 0.1544 0.1523 0.2150 1.2 4aii:A, 4aii:B, 3q85:A
56 1ukv:Y 197 122 0.1812 0.1371 0.2213 1.6 2bcg:Y, 1yzn:A
57 2rhd:A 164 113 0.1745 0.1585 0.2301 1.8
58 7ezd:B 175 155 0.2349 0.2000 0.2258 1.9 7ezb:A, 7ezb:B, 7ezd:A, 7eze:A, 7eze:B
59 6if2:B 178 120 0.2013 0.1685 0.2500 1.9 6ekk:C, 6ekk:D, 6if3:B
60 1z0j:A 169 135 0.2148 0.1893 0.2370 2.0 1yvd:A
61 6hh2:A 174 136 0.1946 0.1667 0.2132 2.0 8fo2:B
62 1z08:C 167 122 0.1946 0.1737 0.2377 2.4 1yzt:A, 1yzt:B, 1yzu:A, 1yzu:B, 1z08:A, 1z08:B, 1z08:D, 1z0i:A
63 1x3s:A 177 85 0.1477 0.1243 0.2588 2.8
64 3cbq:A 169 126 0.2013 0.1775 0.2381 3.6
65 1xzq:A 449 162 0.3087 0.1024 0.2840 3.7 1xzq:B
66 3cpj:B 164 75 0.1275 0.1159 0.2533 4.2
67 2fg5:A 165 127 0.1879 0.1697 0.2205 4.2
68 4tmk:A 210 37 0.1007 0.0714 0.4054 4.3 5tmp:A
69 4anj:A 995 75 0.1409 0.0211 0.2800 4.4 1jbz:A
70 2yc4:C 177 104 0.1611 0.1356 0.2308 5.5
71 7p7q:0 534 37 0.1074 0.0300 0.4324 5.9 7p7r:0, 7p7s:0, 7p7t:0
72 8cww:P 201 31 0.0872 0.0647 0.4194 5.9
73 2bme:A 176 155 0.2416 0.2045 0.2323 7.6 2bmd:A, 2bme:B, 2bme:C, 2bme:D, 1yu9:A, 1z0k:A, 1z0k:C
74 6k0v:A 562 68 0.1208 0.0320 0.2647 8.7 6k0m:A, 6k0n:A, 6k0p:A, 6k0q:A, 6k0s:A, 6k0u:A, 6k0v:B, 6k0v:C, 6k0v:D
75 6s6d:C 284 77 0.1275 0.0669 0.2468 9.8

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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