BioLiP

>protein
PVVKINAIEVPAGAGPELEKRFAHSAHAVENSPGFLGFQLLRPVKGEERYFVVTHWESDEAFQAWANGPAIAAHAGHRAN
PVATGASLLEFEVVLD

The query sequence (length=96) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	3hx9:A	101	96	0.9896	0.9406	0.9896	3.80e-65	6ds7:A, 6ds7:B, 6ds8:A, 6ds8:B, 3hx9:B, 4nl5:A, 4nl5:B, 6ple:A, 6ple:B
2	4jou:A	155	66	0.2500	0.1548	0.3636	9.78e-10	4fvc:A, 4fvc:B, 4fvc:C, 4fvc:D, 4fvc:E, 4fvc:F, 4oz5:A
3	8avh:B	106	79	0.2292	0.2075	0.2785	1.15e-05	8avi:A, 8avi:B
4	2zdo:D	109	72	0.1771	0.1560	0.2361	0.012	2zdo:A, 2zdo:B, 2zdo:C
5	8bsi:a	815	25	0.1354	0.0160	0.5200	0.031
6	4fnh:A	110	83	0.1979	0.1727	0.2289	0.083	4fnh:B, 4fni:A, 4fni:B, 3lgm:A, 3lgm:B, 3lgn:A, 3lgn:B, 3qgp:A, 3qgp:B, 2zdp:A, 2zdp:B
7	7rlw:A	222	75	0.1562	0.0676	0.2000	3.0	7rlv:A, 7rlv:C, 7rlv:E, 7rlw:C, 7rlx:A, 7rly:C, 7rly:E, 7rly:A, 7rlz:A, 7rlz:D
8	5w25:A	583	40	0.1562	0.0257	0.3750	3.1	5w25:B
9	8a4a:B	172	38	0.1146	0.0640	0.2895	3.2	6y7g:A, 6y7g:B
10	3dz8:A	178	38	0.1146	0.0618	0.2895	5.9	8a4b:B, 8a4b:D, 8a4c:B, 8a4c:D
11	1zbd:A	177	38	0.1042	0.0565	0.2632	6.0	3rab:A
12	6kst:B	372	37	0.1771	0.0457	0.4595	6.2	6kxl:A, 6kxl:B, 6kxm:A, 6kxm:B, 6kxn:A, 6kxn:B
13	1xc3:A	295	33	0.1250	0.0407	0.3636	6.5	3lm9:A, 3ohr:A
14	7opr:A	218	45	0.1250	0.0550	0.2667	7.6	3bc1:A, 3bc1:E, 6huf:A, 6huf:O, 6huf:N, 6huf:B, 6huf:E, 6huf:C, 6huf:K, 6huf:M, 6huf:D, 6huf:P, 6huf:F, 6huf:J, 6huf:G, 6huf:I, 6huf:H, 6huf:L, 7opp:A, 7opp:C, 7opq:A, 7opq:B, 7opr:B
15	3kof:A	316	54	0.1667	0.0506	0.2963	7.8	3kof:B, 4s2b:A, 4s2b:B, 4s2c:A, 4s2c:B
16	5ynv:B	313	32	0.1458	0.0447	0.4375	8.7	5y72:A, 5y72:B, 5y7c:A, 5y7c:B, 5y84:A, 5y84:B, 5ynt:A, 5ynt:B, 5ynu:A, 5ynu:B, 5ynv:A, 5ynw:A, 5ynw:B

[Back]