BioLiP

>protein
PLELRPGEYRVLLCVDIGETRPELLRELQRLHVTHTVRKLHVGDFVWVAQETNPRDPANPGELVLDHIVERKRLDDLCSS
IIDGRFREQKFRLKRCGLERRVYLVEELSLPESTLLQAVTNTQVIDGFFVKRTADIKESAAYLALLTRGLQRLYQGHTLR
SRPWGPNPLCSLLTFSDFNA

The query sequence (length=180) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	4p0q:A	285	192	1.0000	0.6316	0.9375	4.69e-125	9f99:A, 9f99:G, 9f99:C, 9f99:E, 9f9a:A, 9f9a:G, 9f9a:C, 9f9a:E, 9f9k:A, 9f9l:A, 9f9l:C, 9f9m:A, 9f9m:C, 4p0p:A, 4p0r:A, 4p0r:C, 4p0s:A, 4p0s:G, 4p0s:E, 4p0s:C
2	1j24:A	133	96	0.1778	0.2406	0.3333	4.55e-05	1j25:A
3	2bgw:A	219	143	0.2333	0.1918	0.2937	0.007
4	8u2o:A	289	60	0.1000	0.0623	0.3000	0.94	9cmz:A, 9cmz:B, 9cmz:C, 8u2o:B
5	1zgl:M	178	54	0.0889	0.0899	0.2963	1.7
6	2fah:C	608	48	0.1222	0.0362	0.4583	2.5	2faf:A, 2faf:B, 2fah:D, 2fah:A, 2fah:B, 2qzy:A, 2qzy:B
7	2die:A	481	35	0.0611	0.0229	0.3143	2.7
8	4ecg:A	368	37	0.0611	0.0299	0.2973	3.9
9	6k4y:I	88	42	0.0778	0.1591	0.3333	4.1
10	2c4m:C	790	98	0.1333	0.0304	0.2449	6.2	2c4m:A, 2c4m:B, 2c4m:D
11	8ufj:B	444	80	0.1056	0.0428	0.2375	7.0	8tfb:A, 8tfb:B, 8tfb:C, 8tfb:D, 8tfb:L, 8tfb:M, 8tfb:O, 8tfb:P, 8tfb:Q, 8tfb:V, 8tfb:X, 8tfb:Y, 8tfk:A, 8tfk:B, 8tfk:C, 8tfk:D, 8tfk:E, 8tfk:F, 8tfk:G, 8tfk:H, 8tfk:I, 8tfk:J, 8tfk:K, 8tfk:L, 8ufj:A, 8ufj:C
12	1s7g:A	252	60	0.1000	0.0714	0.3000	7.1	1ma3:A, 1s7g:B, 1s7g:C, 1s7g:D, 1s7g:E, 4twj:A, 1yc2:A, 1yc2:B, 1yc2:C, 1yc2:D, 1yc2:E
13	7oni:H	380	69	0.1056	0.0500	0.2754	8.2
14	4jrf:A	479	16	0.0500	0.0188	0.5625	8.7
15	5tth:B	621	104	0.1667	0.0483	0.2885	9.1	6d14:B, 7exp:B, 4ipe:B, 4iyn:B, 4j0b:B, 5tvu:B, 5tvw:B, 5tvx:B

[Back]