BioLiP

>protein
NTPHLTIAMITHQQPGDTFWDIIRKGALAAAAKDNVTLKYSNDPDSTKEAVLIQDAVNAKVDGIAVTIPDPPALIPAIKQ
AVAAGIPVVAFNAGIDQWKESGALMYFGQDETVAGQAAGARATSEGFKHVLCVLQAQGQVQLESRCNGVQQTFKGQYTKL
YVNGADQPSVRTTIAAKLKQDPSIDLVITLGAPIAQLAIQAVKDAGSNAKIATFDFNTQVPAEIENGQLQWAIDQQPYVE
GYEAVDSLWLYITNGDTIGGGEAVKTGPFFVDKSNVAAVAKFAERGTR

The query sequence (length=288) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	4ru1:A	288	288	1.0000	1.0000	1.0000	0.0	4ru1:B, 4ru1:C, 4ru1:D, 4ru1:E, 4ru1:F, 4ru1:G, 4ru1:H, 4ru1:I, 4ru1:J, 4ru1:K, 4ru1:L
2	2h3h:A	313	241	0.2188	0.2013	0.2614	1.21e-12	3c6q:C, 3c6q:D, 2h3h:B, 2qvc:A, 2qvc:B, 2qvc:C, 2qvc:D
3	4wut:A	290	276	0.2639	0.2621	0.2754	7.99e-12
4	7x0h:A	287	254	0.2292	0.2300	0.2598	2.12e-09	7x0h:B, 7x0h:C, 7x0h:D
5	5hqj:A	289	280	0.2292	0.2284	0.2357	3.48e-09
6	5dte:B	287	253	0.2361	0.2369	0.2688	1.70e-08	5dte:A, 5dte:C, 5dte:D
7	5xss:A	274	250	0.2222	0.2336	0.2560	8.67e-08	5xsj:X, 5xss:X, 5xss:B, 5xss:C
8	6gt9:A	283	242	0.2153	0.2191	0.2562	2.52e-06	6gt9:B, 6gt9:C, 6gt9:D, 6guq:A
9	5dkv:A	303	290	0.2882	0.2739	0.2862	4.56e-06	5dkv:B, 5dkv:C, 5dkv:D
10	4ry8:B	321	231	0.1875	0.1682	0.2338	7.77e-06	4ry8:A, 4ry8:C, 4ry8:D
11	2ioy:A	274	217	0.1806	0.1898	0.2396	5.97e-05	2ioy:B
12	7e7m:C	284	253	0.2118	0.2148	0.2411	5.94e-04	7e7m:A, 7e7m:B, 7e7m:D
13	4rxt:A	295	278	0.2361	0.2305	0.2446	0.001
14	4rs3:A	315	261	0.2292	0.2095	0.2529	0.007	5hko:A
15	2x7x:A	301	220	0.1736	0.1661	0.2273	0.009	2x7x:B
16	1gud:A	288	239	0.2153	0.2153	0.2594	0.014	1rpj:A, 8wl7:A, 8wl9:A, 8wlb:A
17	3luf:B	246	131	0.1250	0.1463	0.2748	0.017	3luf:A, 3mf4:A, 3mf4:B
18	1dbp:A	271	254	0.2188	0.2325	0.2480	0.023	1drj:A, 1drk:A, 2dri:A, 2gx6:A
19	3ksm:A	276	242	0.1840	0.1920	0.2190	0.069	3ksm:B
20	4z0n:A	307	104	0.0868	0.0814	0.2404	0.091
21	4pe6:B	324	51	0.0625	0.0556	0.3529	0.15	4pe6:A
22	5ibq:A	287	270	0.2222	0.2230	0.2370	0.38	4ry0:A
23	1yj0:A	317	108	0.1007	0.0915	0.2685	0.51	1ala:A, 1yii:A
24	4rk0:D	269	145	0.1215	0.1301	0.2414	0.84	4rk0:A, 4rk0:B, 4rk0:C
25	3mw4:A	178	159	0.1424	0.2303	0.2579	0.93
26	2gbp:A	309	140	0.1215	0.1133	0.2500	1.0	2fvy:A, 2fw0:A, 8fxt:A, 3ga5:A, 3ga5:B, 3gbp:A, 1gca:A, 1gcg:A, 1glg:A, 2hph:A, 2ipl:A, 2ipm:A, 2ipn:A, 2qw1:A
27	3poy:A	1005	163	0.1389	0.0398	0.2454	2.8	3asi:A, 3b3q:E, 3b3q:F, 3biw:E, 3biw:F, 3biw:G, 3bod:A, 2h0b:A, 2h0b:B, 2h0b:C, 2h0b:D, 2r16:A, 2r1d:H, 2r1d:B, 2r1d:D, 2r1d:I, 3vkf:C, 3vkf:D, 2wqz:C, 2wqz:D, 2xb6:C, 2xb6:D, 5z8y:B, 5z8y:D, 5z8y:F, 5z8y:H
28	4yo7:A	287	125	0.1076	0.1080	0.2480	3.0
29	2fn8:A	292	57	0.0590	0.0582	0.2982	4.0
30	4wzz:A	321	42	0.0521	0.0467	0.3571	5.1
31	8jij:A	411	127	0.1111	0.0779	0.2520	6.9	8jik:A
32	4y9t:A	321	59	0.0764	0.0685	0.3729	7.0	5br1:A
33	8oz5:A	514	51	0.0486	0.0272	0.2745	8.8	8oz5:B, 8oz5:C, 8oz5:D, 8oz5:E, 8oz5:F, 8p02:A, 8p02:B, 8p02:C, 8p02:D, 8p02:E, 8p02:F, 8pmk:A, 8pmk:B, 8pmk:C, 8pmk:D, 8pmk:E, 8pmk:F
34	2e1q:A	1307	27	0.0451	0.0099	0.4815	9.5	6a7x:A, 6a7x:B, 6abu:A, 6abu:B, 6ac1:A, 6ac1:B, 6ac4:A, 6ac4:B, 6ad4:A, 6ad4:B, 6adj:A, 6adj:B, 6aju:A, 6aju:F, 3an1:A, 3an1:B, 3b9j:A, 3b9j:I, 2ckj:B, 2ckj:C, 2ckj:D, 2e1q:B, 2e1q:C, 2e1q:D, 2e3t:A, 2e3t:B, 3etr:A, 3etr:L, 3eub:A, 3eub:J, 3eub:S, 3eub:2, 1fiq:A, 3nrz:A, 3nrz:J, 3ns1:A, 3ns1:J, 3nvv:A, 3nvv:J, 3nvw:A, 3nvw:J, 3nvy:A, 3nvy:J, 3nvz:A, 3nvz:J, 3sr6:A, 3sr6:J, 1wyg:A, 4yrw:A, 4yrw:B, 4ysw:A, 4ysw:B, 4yty:A, 4yty:B, 4ytz:A, 4ytz:B

[Back]