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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
NPAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLEQVLWPAKSVKFVQGLLQNAAANAEAKGLDATKLYVSHIQV
NQAPKESSPSHIELVVTE

The query sequence (length=98) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7ohu:P 108 106 1.0000 0.9074 0.9245 3.25e-65 7ohp:P
2 7ohx:P 127 120 1.0000 0.7717 0.8167 3.39e-63 6c0f:P, 6cb1:P, 6em3:P, 7ohy:P
3 8aaf:C 183 143 1.0000 0.5355 0.6853 3.37e-58 8agt:C, 8agu:C, 8agv:C, 8agw:C, 8agx:C, 8agz:C, 5apn:P, 5apo:P, 7azy:y, 7b7d:LR, 8bip:LP, 8bjq:LP, 8bn3:M7, 8bqd:AX, 8bqx:AX, 7bt6:P, 7btb:P, 8ccs:B, 8cdl:B, 8cdr:B, 8ceh:B, 8cf5:B, 8cg8:B, 8cgn:B, 8civ:B, 8cku:B, 8cmj:B, 5dat:M7, 5dat:m7, 5dc3:M7, 5dc3:m7, 5dge:M7, 5dge:m7, 5dgf:M7, 5dgf:m7, 5dgv:M7, 5dgv:m7, 6elz:P, 6em1:P, 6em4:P, 6em5:P, 8eub:AP, 8evp:AP, 8evq:AP, 8evr:AP, 8evs:AP, 8evt:AP, 8ewb:AP, 8ewc:AP, 5fci:M7, 5fci:m7, 5fcj:M7, 5fcj:m7, 6ft6:P, 5gak:R, 6gq1:P, 6gqb:P, 6gqv:P, 5h4p:P, 6hd7:R, 8hfr:Pv, 6hhq:x, 6hhq:CR, 5i4l:M7, 5i4l:m7, 6i7o:AX, 6i7o:XX, 5it7:PP, 3j6x:57, 3j6y:57, 3j77:67, 3j78:67, 3jct:P, 5jcs:P, 5juo:U, 5jup:U, 5jus:U, 5jut:U, 5juu:U, 8k2d:LP, 8k82:LP, 5lyb:M7, 5lyb:m7, 5m1j:P5, 6m62:P, 5mc6:AX, 5mei:x, 5mei:CR, 7mpi:AP, 7mpj:AP, 6n8j:P, 6n8k:P, 6n8l:P, 6n8m:c, 6n8n:c, 6n8o:c, 7n8b:AP, 7nac:P, 5ndg:M7, 5ndg:m7, 5ndv:M7, 5ndv:m7, 5ndw:M7, 5ndw:m7, 7nrc:LR, 7nrd:LR, 5obm:M7, 5obm:m7, 7of1:P, 7oh3:P, 7ohq:P, 7ohr:P, 7ohs:P, 7ohv:P, 7ohw:P, 6oig:P, 5on6:x, 5on6:CR, 7osa:uL22, 7osm:uL22, 8p8m:QO, 8p8n:QO, 8p8u:QO, 8pfr:QO, 6q8y:AX, 6qik:U, 6qt0:U, 6qtz:U, 7r7a:P, 6r84:5, 6r86:5, 6r87:5, 6ri5:U, 7rr5:LP, 6rzz:U, 6s05:U, 6s47:AR, 6snt:v, 6sv4:AX, 6sv4:XX, 6sv4:zX, 6t4q:LP, 5t62:c, 5t6r:c, 6t7i:LP, 6t7t:LP, 6t83:Py, 6t83:A, 5tbw:x, 5tbw:CR, 6tb3:AX, 5tga:M7, 5tga:m7, 5tgm:M7, 5tgm:m7, 6tnu:AX, 7too:AL17, 7top:AL17, 7u0h:P, 4u3m:M7, 4u3m:m7, 4u3n:M7, 4u3n:m7, 4u3u:M7, 4u3u:m7, 4u4n:M7, 4u4n:m7, 4u4o:M7, 4u4o:m7, 4u4q:M7, 4u4q:m7, 4u4r:M7, 4u4r:m7, 4u4u:M7, 4u4u:m7, 4u4y:M7, 4u4y:m7, 4u4z:M7, 4u4z:m7, 4u50:M7, 4u50:m7, 4u51:M7, 4u51:m7, 4u52:M7, 4u52:m7, 4u53:M7, 4u53:m7, 4u55:M7, 4u55:m7, 4u56:M7, 4u56:m7, 4u6f:M7, 4u6f:m7, 7ug6:P, 7uoo:P, 7uqb:P, 7uqz:P, 6uz7:AP, 7v08:P, 4v4b:BN, 4v6i:BV, 4v7f:U, 4v7h:BN, 4v7r:BQ, 4v7r:DQ, 4v88:BP, 4v88:DP, 4v8t:P, 4v8y:BP, 4v8z:BP, 8v83:P, 8v84:P, 8v87:P, 4v91:P, 6woo:P, 2ww9:I, 2wwa:I, 2wwb:I, 6xiq:P, 6xir:P, 8y0u:LP, 6ylg:P, 6ylh:P, 6ylx:P, 6yly:P, 5z3g:T, 7z34:P, 6z6j:LP, 6z6k:LP, 7zpq:BO, 7zrs:BO, 7zs5:BQ, 7zuw:BO, 7zux:EO, 7zw0:LS
4 8c3a:BK 176 143 0.8265 0.4602 0.5664 1.74e-46 8c3a:x, 8cq7:x, 8cq7:BK, 8cqw:x, 8cqw:BK, 8cre:x, 8cre:BK, 8oeq:x, 8oeq:BK, 7pzy:x, 7q08:x, 7q0f:x, 7q0p:x, 7q0r:x, 8q5i:x
5 7r81:R1 168 142 0.7449 0.4345 0.5141 8.32e-41
6 8fkp:LA 143 111 0.6122 0.4196 0.5405 6.13e-37 8fkq:LA, 8fkr:LA, 8fks:LA
7 7olc:LP 186 142 0.6837 0.3602 0.4718 1.12e-36 8i9p:LP, 8i9r:LP, 8i9t:LP, 8i9v:LP, 8i9w:LP, 8i9x:LP, 8i9y:LP, 8i9z:LP, 8ia0:LP, 7old:LP, 8oo0:LP, 8pv1:LP, 8pv2:LP, 8pv3:LP, 8pv4:LP, 8pv5:LP, 8pv6:LP, 8pv7:LP, 8pv8:LP, 8pvk:LP, 8pvl:LP, 7z3n:LP, 7z3o:LP
8 8fku:LA 138 128 0.6122 0.4348 0.4688 1.06e-33 8fkw:LA, 8fkx:LA, 8fky:LA
9 8eth:P 130 104 0.5714 0.4308 0.5385 3.93e-31 8eup:P
10 8ip8:MA 155 144 0.6531 0.4129 0.4444 5.62e-31 8ipa:MA, 8ipb:MA, 8jiv:CP
11 4v3p:LV 171 144 0.6429 0.3684 0.4375 2.77e-30 4v7e:CP
12 7qiw:R 155 144 0.6122 0.3871 0.4167 9.75e-30 8azw:j, 8b2l:j3, 7qiz:R
13 8rjb:P 181 143 0.6122 0.3315 0.4196 2.67e-29 7a01:H2, 8a3d:J, 5aj0:AP, 8b5l:P, 8b6c:P, 9bdl:AL17, 9bdn:AL17, 9bdp:AL17, 8bf9:P, 7bhp:LP, 8bhf:C1, 8bpo:O2, 8btk:BP, 7cpu:LP, 7cpv:LP, 4d5y:P, 4d67:P, 6d90:P, 6d9j:P, 9f1b:BP, 9f1c:BP, 9f1d:BP, 7f5s:LP, 8fkt:LA, 8fkv:LA, 8fkz:LA, 8fl2:LA, 8fl3:LA, 8fl4:LA, 8fl6:LA, 8fl7:LA, 8fl9:LA, 8fla:LA, 8flb:LA, 8flc:LA, 8fld:LA, 8fle:LA, 8flf:LA, 6frk:P, 6ftg:P, 6fti:P, 6ftj:P, 8g5y:LP, 8g5z:LP, 8g60:LP, 8g61:LP, 8g6j:LP, 8glp:LP, 6gz3:AP, 6gz4:AP, 6gz5:AP, 6hcf:P3, 6hcj:P3, 6hcm:P3, 6hcq:P3, 8idt:Y, 8idy:Y, 8ie3:Y, 8ifd:2J, 8ife:2J, 8ine:Y, 8inf:Y, 8ink:Y, 6ip5:2J, 6ip6:2J, 6ip8:2J, 8ipd:Y, 8ipx:Y, 8ipy:Y, 8ir1:Y, 8ir3:Y, 3j7o:P, 3j7p:P, 3j7q:P, 3j7r:P, 3j92:P, 3jag:P, 3jah:P, 3jai:P, 3jaj:P, 3jan:P, 8jdj:U, 8jdk:U, 8jdl:U, 8jdm:U, 8k2c:LP, 5lks:LP, 6lqm:Y, 6lsr:Y, 6lss:Y, 7ls1:J2, 7ls2:J2, 6lu8:Y, 5lzs:P, 5lzt:P, 5lzu:P, 5lzv:P, 5lzw:P, 5lzx:P, 5lzy:P, 5lzz:P, 7mdz:P, 6mtb:P, 6mtc:P, 6mtd:P, 6mte:P, 7nfx:P, 7nwg:P3, 7nwh:P, 7nwi:P, 7o7y:BP, 7o7z:BP, 7o80:BP, 7o81:BP, 7obr:P, 8ohd:LP, 8oj0:LP, 8oj5:LP, 8oj8:LP, 6ole:Q, 6olf:Q, 6olg:AP, 6oli:Q, 6olz:AP, 6om0:Q, 6om7:Q, 7ow7:J, 7oya:P1, 7oyb:P1, 7oyc:P1, 7oyd:P, 8p2k:BP, 6p5i:AP, 6p5j:AP, 6p5k:AP, 6p5n:AP, 8q7z:BP, 8q87:BP, 8qfd:P, 7qgg:Q, 8qoi:LP, 7qvp:MP, 7qvp:LP, 7qwq:P, 7qwr:P, 7qws:P, 6qzp:LP, 6r5q:P, 6r6g:P, 6r6p:P, 6r7q:P, 8rjc:P, 8rjd:P, 8scb:P, 6sgc:P2, 6swa:O, 5t2c:J, 6t59:P3, 7tm3:P, 7toq:AL17, 7tor:AL17, 7tut:P, 7ucj:P, 7uck:P, 4ug0:LP, 4ujc:BP, 4ujd:AP, 4uje:CP, 4v5z:Br, 4v6x:CP, 6w6l:Q, 6xa1:LP, 7xnx:LP, 7xny:LP, 8xsx:LP, 8xsy:LP, 8xsz:LP, 6y0g:LP, 8y0w:LP, 8y0x:LP, 6y2l:LP, 6y57:LP, 6y6x:LP, 8yoo:LP, 8yop:LP, 6z6l:LP, 6z6m:LP, 6z6n:LP, 7zjw:LS, 7zjx:LS, 6zm7:LP, 6zme:LP, 6zmi:LP, 6zmo:LP, 6zvk:H2
14 8eui:P 173 140 0.6122 0.3468 0.4286 1.54e-28 8esq:P, 8esr:P, 8etc:P, 8etg:P, 8eti:P, 8etj:P, 8eug:P, 8euy:P, 8ev3:P
15 4v6w:CP 185 143 0.6020 0.3189 0.4126 3.87e-27 6xu6:CP, 6xu7:CP, 6xu8:CP
16 6zj3:Li 155 139 0.5408 0.3419 0.3813 1.45e-24
17 9bh5:CP 154 143 0.5306 0.3377 0.3636 2.04e-21 9cai:CP
18 5xxb:O 158 149 0.5510 0.3418 0.3624 4.44e-21
19 3jbn:AW 170 143 0.5000 0.2882 0.3427 2.59e-19 3jbo:AW, 3jbp:AW, 8tpu:AW
20 3j79:W 170 143 0.5000 0.2882 0.3427 2.95e-19 5umd:W
21 6az3:T 154 141 0.5102 0.3247 0.3546 7.94e-19 8a3w:T, 8a98:T, 3jcs:T, 8ova:BR, 8ovj:T, 8rxh:LT, 8rxx:LT, 5t2a:P, 5t5h:R
22 4v8m:BR 154 141 0.5000 0.3182 0.3475 1.03e-18 8ove:BR
23 8p5d:LP0 154 140 0.4796 0.3052 0.3357 5.90e-18 8p60:LP0, 8p60:KP0, 7qca:LP0
24 4v8p:BQ 157 115 0.4388 0.2739 0.3739 4.40e-16 4v8p:CQ, 4v8p:EQ, 4v8p:GQ
25 7qep:M7 174 160 0.4082 0.2299 0.2500 5.37e-11
26 6zu5:LP0 153 143 0.3878 0.2484 0.2657 1.07e-10
27 6skf:BV 154 140 0.4082 0.2597 0.2857 1.92e-10 6skg:BV, 6th6:BV
28 6rm3:LP0 154 115 0.3469 0.2208 0.2957 4.65e-08
29 4v4n:AS 150 140 0.3776 0.2467 0.2643 1.66e-07 4v6u:BS
30 8btd:LQ 156 137 0.3878 0.2436 0.2774 6.00e-07 8br8:LQ, 8brm:LQ, 8bsi:LQ, 8bsj:LQ, 8btr:LQ, 8fru:P, 7pwg:P, 7pwo:P2
31 8hku:L22P 150 129 0.3265 0.2133 0.2481 1.63e-05 8hkv:L22P, 8hky:L22P, 8hkz:L22P, 8hl1:L22P, 8hl2:L22P, 8hl3:L22P, 8hl4:L22P, 8hl5:L22P
32 5myj:BV 112 110 0.3571 0.3125 0.3182 1.17e-04
33 3cc2:R 150 106 0.2653 0.1733 0.2453 3.87e-04 3cc4:R, 3cc7:R, 3cce:R, 3ccj:R, 3ccl:R, 3ccm:R, 3ccq:R, 3ccr:R, 3ccs:R, 3ccu:R, 3ccv:R, 3cd6:R, 3cma:R, 3cme:R, 3cpw:Q, 3cxc:Q, 1ffk:O, 3g4s:R, 3g6e:R, 3g71:R, 3i55:R, 3i56:R, 1jj2:Q, 1k73:S, 1k8a:S, 1k9m:S, 1kc8:S, 1kd1:S, 1kqs:Q, 1m1k:S, 1m90:S, 1n8r:S, 1nji:S, 2otj:R, 2otl:R, 3ow2:Q, 1q7y:S, 1q81:S, 1q82:S, 1q86:S, 2qa4:R, 2qex:R, 1qvf:Q, 1qvg:Q, 1s72:R, 4v9f:R, 1vq4:R, 1vq5:R, 1vq6:R, 1vq7:R, 1vq8:R, 1vq9:R, 1vqk:R, 1vql:R, 1vqm:R, 1vqn:R, 1vqo:R, 1vqp:R, 1w2b:Q, 1yhq:R, 1yi2:R, 1yij:R, 1yit:R, 1yj9:R, 1yjn:R, 1yjw:R
34 7nad:P 51 76 0.2755 0.5294 0.3553 0.001 7r72:P
35 8a22:Aq 188 34 0.1633 0.0851 0.4706 0.024 8apn:Aq, 8apo:Aq
36 6yxx:AW 278 31 0.1429 0.0504 0.4516 0.24 7aoi:AW, 6hiv:AW, 6hix:AW, 6yxy:AW
37 7pkt:q 161 66 0.2143 0.1304 0.3182 0.64
38 6jav:A 377 48 0.1837 0.0477 0.3750 0.69 6jaw:A, 6jax:A, 6jay:A
39 1x07:A 231 35 0.1429 0.0606 0.4000 1.3 5cqj:A, 2e98:A, 2e98:B, 2e99:A, 2e99:B, 2e9a:A, 2e9a:B, 2e9c:A, 2e9c:B, 2e9d:A, 2e9d:B, 4h2j:A, 4h2j:B, 4h2m:A, 4h2m:B, 4h2o:B, 4h2o:A, 4h38:A, 4h3a:A, 4h3a:B, 4h3c:A, 4h3c:B, 1jp3:A, 3sgt:B, 3sgv:B, 3sgv:A, 3sgx:A, 3sh0:B, 3sh0:A, 3th8:B, 1ueh:A, 1ueh:B, 1v7u:A, 3wyj:A, 1x06:A, 1x08:A, 1x09:A
40 8bdc:A 963 32 0.1122 0.0114 0.3438 1.6 8bdc:B, 8bdc:C, 8bdc:D
41 6sw9:Z 197 92 0.2755 0.1371 0.2935 2.0 5jb3:Z, 5jbh:Z, 6skf:Ac, 6skg:Ac, 6swc:Z, 6swe:Z, 6th6:Ac, 4v4n:BC, 4v6u:AC, 7zag:Z, 7zah:Z, 7zai:Z, 7zhg:Z
42 5zhe:B 200 33 0.1327 0.0650 0.3939 3.3
43 7esy:B 732 51 0.1735 0.0232 0.3333 5.4

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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