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BioLiP
>protein
NLEQKILQVLSDDGGPVKIGQLVKKCQVPKKTLNQVLYRLKKEDRVSSPEPATWSIG

The query sequence (length=57) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 2heo:A 59 57 0.9123 0.8814 0.9123 8.72e-32 2heo:D, 1j75:A
2 3f21:A 67 59 0.3509 0.2985 0.3390 0.005 2acj:B, 2acj:C, 2acj:D, 3f21:B, 3f21:C, 3f22:A, 3f22:B, 3f22:C, 3f23:A, 3f23:B, 3f23:C, 2gxb:A, 2gxb:B, 3irq:B, 3irq:A, 3irq:D, 3irq:C, 3irr:C, 3irr:D, 3irr:A, 3irr:B, 1qbj:A, 1qbj:B, 1qbj:C, 5zu1:C, 5zu1:A, 5zu1:B, 5zuo:B, 5zuo:C, 5zuo:D, 5zup:B, 5zup:C, 5zup:D
3 4kmf:A 62 57 0.2807 0.2581 0.2807 0.008
4 2acj:A 53 59 0.3158 0.3396 0.3051 0.069 5zuo:A, 5zup:A
5 5zu1:D 47 59 0.3158 0.3830 0.3051 0.094
6 1sfu:A 70 25 0.2105 0.1714 0.4800 0.65 1sfu:B
7 5huq:A 433 22 0.1930 0.0254 0.5000 2.1 6c1w:A, 6c1w:B, 6c1w:C, 8ezf:B, 8ezh:B, 8ezi:B, 5huq:B
8 7t65:A 4252 30 0.2105 0.0028 0.4000 2.3 7t64:A, 7t64:B, 7t64:C, 7t64:D, 7t65:B, 7t65:C, 7t65:D
9 7tzc:A 4404 30 0.2105 0.0027 0.4000 2.3 3rqr:A, 8sen:A, 8sen:B, 8sen:C, 8sen:D, 8seo:A, 8seo:B, 8seo:C, 8seo:D, 8sep:A, 8sep:B, 8sep:C, 8sep:D, 8seq:A, 8seq:B, 8seq:C, 8seq:D, 8ser:A, 8ser:B, 8ser:C, 8ser:D, 8ses:A, 8ses:B, 8ses:C, 8ses:D, 8set:A, 8set:B, 8set:C, 8set:D, 7tzc:B, 7tzc:G, 7tzc:I
10 4hf1:A 129 40 0.2105 0.0930 0.3000 2.4 4chu:A, 4hf1:B, 4hf2:A, 4hf2:B
11 4chu:B 127 40 0.2105 0.0945 0.3000 2.9
12 6cig:A 349 35 0.1754 0.0287 0.2857 3.4 1fp2:A
13 2qyo:A 353 36 0.1579 0.0255 0.2500 5.4 2qyo:B
14 8bw6:A 99 26 0.1930 0.1111 0.4231 7.4
15 7cya:A 139 37 0.2105 0.0863 0.3243 7.4
16 7spq:A 316 20 0.1579 0.0285 0.4500 9.8

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417