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BioLiP
>protein
NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESEKLQIKNQLEEVKLELAG

The query sequence (length=73) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5gnj:B 77 73 1.0000 0.9481 1.0000 1.81e-47 5gnj:G, 5gnj:I, 5gnj:A, 5gnj:E, 5gnj:F, 5gnj:M, 5gnj:N
2 8ia3:E 111 87 0.3973 0.2613 0.3333 3.40e-05 8ia3:A, 8ia3:B, 8ia3:F
3 5i50:B 96 73 0.3699 0.2812 0.3699 1.64e-04 5i50:A, 1nkp:A, 1nkp:D
4 7xi3:A 287 53 0.2603 0.0662 0.3585 0.001
5 1an4:A 65 52 0.2466 0.2769 0.3462 0.002 1an4:B
6 1hlo:A 80 51 0.2329 0.2125 0.3333 0.004
7 5eyo:C 88 51 0.2329 0.1932 0.3333 0.004 1an2:A, 5eyo:A, 1hlo:B, 1nkp:B, 1nkp:E, 1nlw:B, 1nlw:E
8 8ow1:B 116 47 0.2603 0.1638 0.4043 0.005 8ovw:A, 8ovw:B, 8ow0:A, 8ow0:B, 8ow1:A, 7ssa:L, 7ssa:K
9 8osb:B 66 43 0.2466 0.2727 0.4186 0.005
10 5nj8:D 134 51 0.2466 0.1343 0.3529 0.008
11 7xi4:A 283 51 0.2466 0.0636 0.3529 0.010 8g4a:A, 8g4a:B, 5nj8:B, 5sy7:A, 5v0l:A, 7xhv:A, 4zph:A, 4zpk:A
12 4zpr:A 235 54 0.2466 0.0766 0.3333 0.023
13 4s2r:P 615 52 0.2192 0.0260 0.3077 0.043 4s2r:Q, 4s2t:P, 4s2t:Q
14 8osl:N 290 57 0.2329 0.0586 0.2982 0.15 4h10:A, 8osk:N, 8osl:P
15 7d8t:A 199 51 0.2192 0.0804 0.3137 0.34 4ati:A, 4ati:B, 4atk:A, 4atk:B, 7d8t:B, 6g1l:A, 8vu0:A, 8vu0:B
16 7xq5:A 75 46 0.2329 0.2267 0.3696 0.45
17 7tby:A 1788 44 0.2329 0.0095 0.3864 0.66 7tc0:A
18 7roq:A 1831 44 0.2329 0.0093 0.3864 0.66
19 7tbw:A 1928 44 0.2329 0.0088 0.3864 0.66
20 7m1q:A 1911 30 0.1507 0.0058 0.3667 1.6
21 8f5b:A 1924 30 0.1507 0.0057 0.3667 1.6 7lkz:A
22 7e7q:A 1958 30 0.1507 0.0056 0.3667 1.6
23 7e7o:A 2003 30 0.1507 0.0055 0.3667 1.6 7lkp:A
24 7w02:A 1566 29 0.1918 0.0089 0.4828 3.6
25 4eot:A 92 19 0.1370 0.1087 0.5263 5.6 4eot:B
26 2j28:9 430 26 0.1370 0.0233 0.3846 8.6 5aka:5
27 6uld:A 428 25 0.1507 0.0257 0.4400 9.4 6uld:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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