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BioLiP
>protein
NCNVELALTSDGRTIVCYHPSVDIPYEHTKPIPREEGPMIEQLSKMFFTTKHRWYPHGRYHRCRKNLNPPKDR

The query sequence (length=73) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 6i9r:a 83 74 0.9863 0.8675 0.9730 2.91e-49 7a5f:a3, 7a5g:a3, 7a5h:a, 7a5i:a3, 7a5j:a, 7a5k:a3, 3j9m:a, 6nu2:a, 6nu3:a, 7o9k:a, 7o9m:a, 7of0:a, 7of2:a, 7of3:a, 7of4:a, 7of5:a, 7of6:a, 7of7:a, 7oi6:a, 7oi7:a, 7oi8:a, 7oi9:a, 7oia:a, 7oib:a, 7oic:a, 7oid:a, 7oie:a, 5ool:a, 5oom:a, 7pd3:a, 7qh6:a, 7qh7:a, 8qu5:a
2 8k2a:Lp 97 88 1.0000 0.7526 0.8295 3.00e-48 8k2b:Lp, 7og4:a, 8xt0:Lp, 8xt1:Lp, 8xt2:Lp, 8xt3:Lp, 6zs9:a, 6zsa:a, 6zsb:a, 6zsc:a, 6zsd:a, 6zse:a, 6zsg:a
3 7l08:a 108 99 1.0000 0.6759 0.7374 2.46e-46 8any:a, 3j7y:a, 7l20:a, 7odr:a, 7ods:a, 7odt:a, 8oir:Br, 8oit:Br, 8pk0:a, 7po4:a, 7qi4:a, 7qi5:a, 7qi6:a, 8qsj:a, 6vlz:a, 6vmi:a, 6zm5:a, 6zm6:a
4 6gaw:Bf 108 99 0.8904 0.6019 0.6566 1.56e-39 6gb2:Bf, 7nqh:Bf, 7nql:Bf, 7nsh:Bf, 7nsi:Bf, 7nsj:Bf, 8oin:Br, 8oiq:Br, 6ydp:Bf, 6ydw:Bf
5 5aj4:Bf 108 99 0.8767 0.5926 0.6465 2.50e-37
6 3j7a:F 257 70 0.2740 0.0778 0.2857 0.68 3jbn:F, 3jbo:F, 3jbp:F, 6okk:F, 8tpu:SF
7 4v7f:l 380 37 0.1781 0.0342 0.3514 0.88 5jcs:u, 4v8t:t
8 8hfr:pT 580 37 0.1781 0.0224 0.3514 1.1 5apn:x, 5apo:x, 7z34:4
9 7uoo:4 538 37 0.1781 0.0242 0.3514 1.1 6ft6:4, 3jct:4, 6m62:4, 6rzz:r, 7uqb:4, 7uqz:4, 7v08:4, 6ylg:4, 6ylh:4
10 6hiv:BP 202 33 0.1781 0.0644 0.3939 1.2 6hix:BP
11 8azw:G 186 25 0.1233 0.0484 0.3600 4.2 8b2l:G3, 7qiw:S, 7qiz:S
12 2zze:A 744 49 0.2466 0.0242 0.3673 4.8 2zze:B, 2zzf:A, 2zzg:A, 2zzg:B
13 8byi:A 320 21 0.0959 0.0219 0.3333 5.9 8byi:B, 8byi:C, 8byi:D, 8byi:E
14 7rpk:A 953 20 0.1370 0.0105 0.5000 7.6 7rph:A, 7rpi:A, 7rpj:A
15 6xe6:A 826 20 0.1370 0.0121 0.5000 7.8
16 7e2i:D 907 20 0.1370 0.0110 0.5000 7.9 7e2g:D, 7e2h:E

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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