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BioLiP
>protein
MYKIQLVNQKEGIDVTIQCAGDQYILDAAEEQGVDLPYSCRAGACSTCAGKLVKGSVNQSDQSFLDEDQISKGFILTCVA
YPTSDCVIQTHQEEALY

The query sequence (length=97) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 3ab5:A 97 97 0.9897 0.9897 0.9897 3.14e-67 3ab5:B, 3wcq:A
2 7y5e:NN 99 96 0.7526 0.7374 0.7604 1.27e-52 7y5e:N2, 7y7a:N7, 7y7a:No
3 7s3d:X 97 96 0.7216 0.7216 0.7292 8.60e-52 7s3d:W, 7s3d:x
4 1rfk:B 97 95 0.7113 0.7113 0.7263 1.63e-50 3p63:A, 3p63:B, 1rfk:A
5 3b2g:A 98 96 0.7010 0.6939 0.7083 5.67e-50 3b2g:B
6 4fxc:A 98 96 0.7010 0.6939 0.7083 1.05e-49
7 1czp:A 98 96 0.7010 0.6939 0.7083 5.69e-48 1czp:B, 1ewy:C, 1fxa:A, 1fxa:B, 1j7a:A, 1j7b:A, 1j7c:A, 1qoa:A, 1qoa:B, 1qob:A, 1qob:B, 1qof:A, 1qof:B, 1qog:A, 1qog:B, 1qt9:A
8 6khi:1 98 96 0.6907 0.6837 0.6979 8.37e-45 5aui:A, 7fix:R1, 7fix:R2, 7fix:R3, 6jo2:A, 6l7o:R, 1roe:A, 5zf0:P1, 5zf0:P2, 5zf0:P3, 5zf0:P4, 5zf0:P6, 5zf0:P5
9 5auk:A 96 96 0.6598 0.6667 0.6667 3.78e-44 1dox:A, 1doy:A, 2kaj:A, 1off:A, 2pvg:C, 2pvo:D
10 7akt:A 107 96 0.6701 0.6075 0.6771 7.74e-44 6kum:A, 6kum:B, 6kv0:A, 6kv0:B, 6lk1:A, 6lk1:B, 2mh7:A, 2n0s:B, 7wzn:G
11 6xtf:D 96 99 0.6495 0.6562 0.6364 2.05e-42 6xtf:C
12 3av8:A 97 97 0.7010 0.7010 0.7010 7.87e-42 3av8:B, 3av8:C, 3av8:D, 1fxi:A, 1fxi:B, 1fxi:C, 1fxi:D
13 6iri:A 107 96 0.5773 0.5234 0.5833 9.32e-42
14 4zho:A 97 95 0.6186 0.6186 0.6316 2.18e-41 4zho:B
15 1awd:A 94 96 0.6598 0.6809 0.6667 3.98e-41
16 1a70:A 97 95 0.6082 0.6082 0.6211 4.40e-40
17 6yac:N 97 95 0.6289 0.6289 0.6421 1.21e-38 6yez:N
18 1gaq:B 98 95 0.6186 0.6122 0.6316 1.62e-38 3b2f:A, 3b2f:B, 5h8y:E, 5h8y:F, 5h92:C, 3w5u:B, 3w5u:D, 3w5u:F, 3w5u:H, 3w5v:B, 3w5v:D
19 1pfd:A 96 95 0.5670 0.5729 0.5789 1.13e-37
20 5h57:A 97 97 0.6186 0.6186 0.6186 1.19e-37 5h57:B, 5h57:C, 5h57:D, 5h57:E, 5h57:F, 5h5j:B
21 4itk:A 104 96 0.5979 0.5577 0.6042 1.31e-36
22 1iue:A 98 81 0.5258 0.5204 0.6296 9.11e-36 1iue:B
23 4zhp:A 98 95 0.5670 0.5612 0.5789 9.73e-36
24 6vjv:A 96 95 0.5567 0.5625 0.5684 3.34e-34 6vjv:B
25 1frr:A 95 84 0.5052 0.5158 0.5833 1.97e-32 1frr:B
26 8jc1:A 267 83 0.5361 0.1948 0.6265 5.32e-31 8jc1:B, 8jc1:C, 8jc1:D
27 1frd:A 98 95 0.5361 0.5306 0.5474 1.30e-29
28 1wri:A 93 95 0.4845 0.5054 0.4947 8.47e-27
29 4n58:A 266 80 0.4639 0.1692 0.5625 9.96e-25 4n58:B, 4n59:A, 4n59:B
30 1e0z:A 128 73 0.3196 0.2422 0.4247 4.82e-15 1e10:A
31 1doi:A 128 66 0.2990 0.2266 0.4394 2.04e-14
32 1krh:A 337 84 0.2474 0.0712 0.2857 1.67e-07 1krh:B
33 5ogx:A 333 76 0.2268 0.0661 0.2895 7.37e-07
34 3zyy:X 628 66 0.1959 0.0303 0.2879 3.95e-06 4c1n:J, 4c1n:I, 4c1n:K, 4c1n:X, 3zyy:Y
35 1jq4:A 98 82 0.2474 0.2449 0.2927 4.07e-06
36 7c3b:B 306 56 0.1856 0.0588 0.3214 1.17e-05
37 7c3b:C 334 56 0.1856 0.0539 0.3214 1.19e-05 7c3a:A, 7c3a:B, 7c3a:C, 7c3b:A
38 6kbh:A 765 71 0.1753 0.0222 0.2394 1.57e-04
39 2pia:A 321 69 0.1753 0.0530 0.2464 2.04e-04
40 4wqm:A 326 67 0.2165 0.0644 0.3134 2.90e-04
41 7ylr:A 326 58 0.1546 0.0460 0.2586 8.23e-04
42 6laa:A 753 76 0.1649 0.0212 0.2105 0.008 6gii:A, 6ldl:A
43 6icm:D 87 56 0.1649 0.1839 0.2857 0.008
44 5frt:E 105 53 0.1856 0.1714 0.3396 0.008 5ffi:E
45 5frt:A 119 53 0.1856 0.1513 0.3396 0.011 5ffi:A, 5ffi:B, 5ffi:C, 5ffi:D, 5frt:B, 5frt:C, 5frt:D, 6yav:E, 6yav:A, 6yav:B, 6yav:C, 6yav:D
46 7q5y:A 626 41 0.1649 0.0256 0.3902 0.017 7q5y:G, 7q5y:M, 7q5y:S
47 1i7h:A 109 55 0.1649 0.1468 0.2909 0.19 1i7h:B, 1i7h:C
48 7awt:G 907 94 0.2680 0.0287 0.2766 0.33 7nyr:G, 7nyu:G, 7nyv:G, 7nz1:G, 7p61:G, 7p62:G, 7p63:G, 7p64:G, 7p69:G, 7p7c:G, 7p7e:G, 7p7j:G, 7p7k:G, 7p7l:G, 7p7m:G, 7z7r:G, 7z7s:G, 7z7t:G, 7z7v:G, 7z80:G, 7z83:G, 7z84:G, 7zc5:G, 7zci:G
49 5uj5:A 132 25 0.1340 0.0985 0.5200 1.5
50 8oh5:C 1172 55 0.1856 0.0154 0.3273 2.0 8oh5:F, 8oh5:I, 8oh5:L, 8oh9:C, 8oh9:F, 8oh9:I, 8oh9:L
51 2wlb:A 103 40 0.1546 0.1456 0.3750 2.1 2wlb:B
52 8gym:qH 129 26 0.1134 0.0853 0.4231 3.4 8gym:qh, 8gym:QH, 8gym:Qh, 7tgh:3H
53 2y5c:A 107 25 0.1340 0.1215 0.5200 3.7 2y5c:B
54 3kl9:A 340 34 0.1237 0.0353 0.3529 3.9 3kl9:B, 3kl9:C, 3kl9:D, 3kl9:E, 3kl9:F, 3kl9:G, 3kl9:H, 3kl9:I, 3kl9:J, 3kl9:K, 3kl9:L
55 6ljq:A 140 24 0.0928 0.0643 0.3750 5.0 6ljr:A
56 2rgt:B 154 63 0.1856 0.1169 0.2857 7.0 2rgt:A
57 2jtn:A 182 63 0.1856 0.0989 0.2857 7.6

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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