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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
MYEAIGHRVEDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKGVAGVRD
HFRIAALWWQQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVGMRR
AMELMLTNRTLYPEEAKDWGLVSRVYPKDEFREVAWKVARELAAAPTHLQVMAKERFHAGWMQPVEECTEFEIQNVIASV
THPHFMPCLTRFLDGPQVELPAGV

The query sequence (length=264) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1jxz:B 269 269 1.0000 0.9814 0.9814 0.0 1jxz:A, 1jxz:C, 1nzy:A, 1nzy:B, 1nzy:C
2 6slb:AAA 257 223 0.2803 0.2879 0.3318 1.88e-32 6sla:AAA, 6sla:BBB, 6sla:CCC, 6sla:DDD, 6sla:EEE, 6sla:FFF
3 3h81:A 256 232 0.2992 0.3086 0.3405 7.74e-30 3h81:C, 3q0g:C, 3q0g:D, 3q0g:F, 3q0j:C, 3q0j:F
4 2vss:B 247 204 0.2538 0.2713 0.3284 1.05e-28 6l3p:A, 6l3p:B, 2vss:D, 2vss:E, 2vss:F, 2vsu:A, 2vsu:B, 2vsu:D, 2vsu:E, 2vsu:F
5 5zai:C 259 233 0.2689 0.2741 0.3047 2.01e-27 5zai:A, 5zai:B, 5zai:E
6 1dub:A 260 221 0.2652 0.2692 0.3167 1.00e-26 1dub:B, 1dub:C, 1dub:E, 1dub:F, 1dub:D, 2dub:A, 2dub:B, 2dub:C, 2dub:E, 2dub:F, 2dub:D, 1ey3:A, 1ey3:B, 1ey3:C, 1ey3:D, 1ey3:E, 1ey3:F, 1mj3:A, 1mj3:B, 1mj3:C, 1mj3:E, 1mj3:F
7 2hw5:C 260 221 0.2614 0.2654 0.3122 2.28e-25
8 2uzf:A 260 216 0.2614 0.2654 0.3194 1.02e-24
9 4i4z:A 275 225 0.2689 0.2582 0.3156 1.04e-21 4eml:A, 4eml:B, 4eml:C, 4eml:D, 4eml:E, 4eml:F, 4i4z:F, 4i4z:B, 4i4z:D, 4i4z:C, 4i4z:E, 4i4z:G, 4i4z:H, 4i4z:I, 4i52:A, 4i52:B, 4i52:C, 4i52:D, 4i52:E, 4i52:F, 4i52:G, 4i52:H, 4i52:I
10 4i42:A 285 208 0.2462 0.2281 0.3125 3.68e-21 4els:A, 4els:B, 4els:C, 4els:D, 4els:E, 4els:F, 4elw:A, 4elw:B, 4elw:C, 4elw:D, 4elw:E, 4elw:F, 4elx:A, 4elx:B, 4elx:C, 4elx:D, 4elx:F, 3h02:A, 3h02:B, 3h02:C, 3h02:D, 3h02:E, 3h02:F, 4i42:F, 4i42:B, 4i42:D, 4i42:C, 4i42:E, 4i42:G, 4i42:L, 4i42:H, 4i42:J, 4i42:I, 4i42:K, 3t88:A, 3t88:E, 3t88:B, 3t88:F, 3t88:C, 3t88:D
11 3p85:A 224 197 0.2462 0.2902 0.3299 5.07e-21
12 6p5u:E 246 209 0.2386 0.2561 0.3014 8.04e-20 6p5u:A, 6p5u:B, 6p5u:C, 6p5u:D, 6p5u:F
13 4izc:B 266 215 0.2386 0.2368 0.2930 2.32e-19 4izc:A, 4izd:A, 4izd:B
14 5jbx:B 261 223 0.2652 0.2682 0.3139 2.47e-18 5jbx:A
15 3ome:C 247 204 0.2235 0.2389 0.2892 4.46e-17 3ome:A, 3ome:B, 3ome:D, 3ome:E, 3ome:F
16 7xwt:B 277 203 0.2121 0.2022 0.2759 8.53e-17 7xwv:A, 7xwv:B
17 3pe8:A 219 189 0.2311 0.2785 0.3228 1.11e-15
18 3t3w:F 248 209 0.2273 0.2419 0.2871 3.42e-15 3t3w:A, 3t3w:B, 3t3w:C, 3t3w:D, 3t3w:E
19 6ysw:A 707 216 0.2273 0.0849 0.2778 3.72e-15
20 5duf:A 245 199 0.2311 0.2490 0.3065 3.39e-14 5dtw:A, 5dtw:D, 5du4:A, 5du6:A, 5du6:B, 5du6:C, 5du8:A, 5du8:B, 5du8:C, 5duc:A, 5duc:B, 5duc:C
21 6iun:B 692 203 0.2045 0.0780 0.2660 5.34e-14 6iun:A
22 2a81:A 235 224 0.2235 0.2511 0.2634 4.24e-13
23 1wdl:A 715 245 0.2121 0.0783 0.2286 4.07e-12 2d3t:A, 2d3t:B, 1wdk:A, 1wdk:B, 1wdl:B, 1wdm:A, 1wdm:B
24 1xx4:A 254 248 0.2386 0.2480 0.2540 5.91e-12
25 2j5s:A 250 206 0.2008 0.2120 0.2573 1.23e-11 2j5s:B
26 1rjn:B 275 221 0.2348 0.2255 0.2805 2.73e-11 1q51:A, 1q51:C, 1q51:D, 1q51:E, 1q51:F, 1q51:G, 1q51:H, 1q51:I, 1q51:J, 1q51:K, 1q51:L, 1rjm:A, 1rjm:B, 1rjm:C, 1rjn:A, 1rjn:C, 3t8a:B, 3t8a:C
27 1sg4:B 258 248 0.2159 0.2209 0.2298 4.24e-11
28 3zwa:A 727 240 0.2614 0.0949 0.2875 6.20e-11 5mgb:A, 5mgb:B, 5omo:A, 5omo:B, 2x58:A, 2x58:B, 6z5f:AAA, 6z5f:BBB, 6z5o:AAA, 6z5v:AAA, 6z5v:BBB, 6zib:AAA, 6zib:BBB, 6zic:AAA, 6zic:BBB, 3zw9:A, 3zw9:B, 3zwa:B, 3zwb:A, 3zwb:B, 3zwc:A, 3zwc:B
29 7bor:A 247 174 0.1705 0.1822 0.2586 7.57e-11 7bor:C
30 4jvt:A 257 196 0.2121 0.2179 0.2857 1.33e-10 4omr:A
31 4qii:B 301 235 0.2462 0.2159 0.2766 3.90e-10 1q51:B, 4qii:A, 4qii:F, 4qii:E, 4qii:C, 4qii:D, 4qii:G, 4qii:L, 4qii:H, 4qii:K, 4qii:I, 4qii:J, 4qij:A, 4qij:F, 4qij:B, 4qij:E, 4qij:C, 4qij:D, 4qij:G, 4qij:K, 4qij:H, 4qij:J, 4qij:I, 4qij:L
32 3bpt:A 362 146 0.1477 0.1077 0.2671 4.19e-10
33 1szo:D 251 206 0.1932 0.2032 0.2476 1.23e-09 1szo:A, 1szo:B, 1szo:C, 1szo:E, 1szo:F, 1szo:G, 1szo:H, 1szo:I, 1szo:J, 1szo:K, 1szo:L
34 6j0p:A 564 245 0.2083 0.0975 0.2245 3.00e-09 6j0p:B, 6j1e:A, 6j1f:A, 6j1f:B, 6j1g:A, 6j1i:A, 6j1j:A
35 6tnm:A 719 250 0.1932 0.0709 0.2040 4.61e-09
36 1ef9:A 261 221 0.1932 0.1954 0.2308 4.62e-08 6n92:A, 6n92:B, 6n92:C, 6n92:D, 6n92:E, 6n92:F, 6n93:A, 6n93:B, 6n93:C, 6n93:D, 6n93:E, 6n93:F, 6n94:A, 6n94:B, 6n94:C, 6n94:D, 6n94:E, 6n94:F, 6n95:A, 6n95:B, 6n95:C, 6n95:D, 6n95:E, 6n95:F, 6n96:A, 6n96:B, 6n96:C, 6n96:D, 6n96:E, 6n96:F, 6n97:A, 6n97:B, 6n97:C, 6n97:D, 6n97:E, 6n97:F
37 8oqs:B 735 184 0.1970 0.0707 0.2826 2.04e-07 4b3i:A, 4b3i:B, 4b3j:A, 4b3j:B, 7o4s:A, 7o4s:B, 7o4t:A, 7o4t:B, 7o4u:A, 7o4u:B, 7o4v:B, 7o4v:A, 8opu:A, 8opu:B, 8opv:A, 8opv:B, 8oql:A, 8oql:B, 8oqn:A, 8oqn:B, 8oqo:A, 8oqo:B, 8oqp:A, 8oqp:B, 8oqq:A, 8oqq:B, 8oqr:A, 8oqr:B, 8oqs:A, 8oqt:B, 8oqt:A, 8oqu:A, 8oqu:B, 8oqv:A, 8oqv:B, 8pf8:A, 8pf8:B
38 6eqo:A 1804 171 0.1780 0.0261 0.2749 3.65e-06 6eqo:B
39 5kag:D 423 214 0.2008 0.1253 0.2477 2.44e-05 5kag:A, 5kag:B, 5kag:C, 5kag:E, 5kag:F, 5kag:G, 5kag:H, 5kag:I, 5kag:J, 5kag:K, 5kag:L, 5kah:A, 5kah:B, 5kah:C, 5kah:D, 5kah:E, 5kah:F, 5kah:G, 5kah:H, 5kah:I, 5kah:J, 5kah:K, 5kah:L, 5kaj:A, 5kaj:B, 5kaj:C, 5kaj:D, 5kaj:E, 5kaj:F, 5kaj:G, 5kaj:H, 5kaj:I, 5kaj:J, 5kaj:K, 5kaj:L, 2np9:A, 2np9:B, 2np9:C, 2pg8:A, 2pg8:B, 2pg8:C, 4ylh:A, 4ylh:B, 4ylh:C, 4ylh:D, 4ylh:E, 4ylh:F, 4ylh:G, 4ylh:H, 4ylh:I, 4ylh:J, 4ylh:K, 4ylh:L
40 3rrv:B 254 190 0.1780 0.1850 0.2474 2.99e-05 3rrv:A, 3rrv:C, 3rrv:D, 3rrv:E, 3rrv:F
41 4hdt:A 340 193 0.1970 0.1529 0.2694 1.71e-04
42 4fnb:A 232 237 0.2121 0.2414 0.2363 0.001 4fn8:A, 4fnd:A
43 6z1p:BI 1413 211 0.1894 0.0354 0.2370 0.001
44 7aor:z 1071 63 0.0720 0.0177 0.3016 0.011
45 6hiv:Cv 1059 63 0.0682 0.0170 0.2857 0.032 6hiw:Cv, 6hiy:Cv, 7pub:Cv
46 8r3s:A 663 121 0.1250 0.0498 0.2727 0.40 8r3s:B, 8r3s:C, 8r3s:D, 8r3s:E, 8r3s:F, 8r3s:G, 8r3s:H, 8r3s:I, 8r3s:J
47 6ffh:A 414 76 0.0833 0.0531 0.2895 3.0 5cgc:A, 5cgd:A, 6ffi:A, 4oo9:A, 7p2l:A
48 7aqr:W 112 45 0.0455 0.1071 0.2667 4.1 7ar7:W, 7ar8:W, 7arb:W, 8bee:W, 8bpx:W, 8bq5:W, 8bq6:W
49 6tvo:A 1011 79 0.0871 0.0227 0.2911 4.1 2l1l:B
50 7bj3:A 936 40 0.0492 0.0139 0.3250 7.2 8bty:A, 3eif:A, 1xf1:A, 1xf1:B, 7yzx:A
51 2o5c:A 634 53 0.0758 0.0315 0.3774 7.8 1i7d:A, 2o19:A, 2o19:B, 2o54:A, 2o54:B, 2o59:A, 2o59:B, 2o5c:B, 2o5e:A, 2o5e:B
52 3aaw:C 392 50 0.0682 0.0459 0.3600 7.8 3aaw:A, 3aaw:B, 3aaw:D, 3ab2:A, 3ab2:B, 3ab2:C, 3ab2:D, 3ab2:E, 3ab2:F, 3ab2:G, 3ab2:H, 3ab2:I, 3ab2:J, 3ab2:K, 3ab2:L, 3ab2:M, 3ab2:N, 3ab2:O, 3ab2:P, 3ab4:B, 3ab4:D, 3ab4:F, 3ab4:H, 3ab4:J, 3ab4:K, 3ab4:L, 3ab4:M, 3ab4:N, 3ab4:P, 2dtj:A, 2dtj:B
53 8tr2:A 745 50 0.0606 0.0215 0.3200 9.8 2e4u:A, 2e4u:B, 2e4v:A, 2e4v:B, 2e4w:A, 2e4w:B, 2e4x:A, 2e4x:B, 2e4y:A, 2e4y:B, 8tqb:A, 8tqb:B, 8tr0:B, 8tr2:B, 8trc:A, 8trc:B, 8trd:A, 8trd:B, 7wi6:A, 7wi6:B, 7wi8:A, 7wi8:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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