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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
MTSVGVPIKILHEAEGHMVTLETVTGEVYRGKLSEAEDNMNCQLAETVVTFRDGRSHQLDNVFIRGNKIRFMILPDMLKN
A

The query sequence (length=81) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8ro0:a 81 81 1.0000 1.0000 1.0000 3.82e-57 8ro1:a
2 8c6j:d 84 79 0.7407 0.7143 0.7595 1.35e-42 7a5p:l, 7a5p:a, 7abg:e, 7abg:l, 7abi:l, 6ah0:h, 6ah0:T, 6ahd:g, 6ahd:h, 7b0y:i, 8c6j:n, 8ch6:j, 8ch6:3, 7dvq:h, 7evo:e, 9fmd:h, 9fmd:a, 8h6e:5g, 8h6e:4g, 8h6e:2g, 8h6j:5g, 8h6j:4g, 8h6j:2g, 8h6k:5g, 8h6k:2g, 8h6l:5g, 8h6l:2g, 8hk1:e, 8i0p:g, 8i0p:l, 8i0r:g, 8i0r:l, 8i0s:g, 8i0s:l, 8i0t:g, 8i0t:l, 8i0u:g, 8i0u:l, 8i0v:g, 8i0v:l, 8i0w:g, 8i0w:h, 6id1:a, 5mqf:l, 5o9z:W, 5o9z:e, 4pjo:A, 4pjo:a, 4pjo:O, 4pjo:o, 8q7q:d, 8q7v:d, 8q7w:d, 8q7x:d, 6qdv:n, 6qdv:d, 8qo9:23, 8qo9:53, 8qo9:43, 7qtt:j, 6qw6:43, 6qw6:53, 6qx9:13, 6qx9:53, 6qx9:23, 6qx9:43, 8qxd:23, 8qxd:43, 8qzs:53, 8qzs:23, 8qzs:43, 8r08:13, 8r08:23, 8r08:43, 8r09:23, 8r09:53, 8r09:43, 8r0a:53, 8r0a:23, 8r0a:43, 8r0b:23, 8r0b:43, 8r0b:53, 8rm5:23, 8rm5:43, 8ro2:a, 6v4x:A, 7vpx:e, 7vpx:j, 7w59:a, 7w59:h, 7w5a:a, 7w5a:h, 7w5b:a, 7w5b:h, 4wzj:A, 4wzj:H, 4wzj:O, 4wzj:AA, 4wzj:HH, 4wzj:OO, 4wzj:AAA, 4wzj:HHH, 4wzj:OOO, 4wzj:AAAA, 4wzj:HHHH, 4wzj:OOOO, 5xjc:a, 5xjc:h, 6y53:l, 6y5q:l, 8y6o:d, 8y6o:k, 8y6o:r, 8y7e:h, 5yzg:a, 5yzg:h, 5z56:a, 5z56:h, 5z57:a, 5z57:h, 5z58:a, 5z58:h
3 3jb9:D 96 74 0.5802 0.4896 0.6351 3.07e-31 3jb9:Z
4 6g90:d 93 77 0.4815 0.4194 0.5065 6.04e-28 7b9v:n, 7b9v:d, 6bk8:o, 6bk8:g, 7dco:l, 6exn:n, 6exn:d, 6g90:v, 5gam:d, 5gan:n, 5gan:d, 5gao:n, 5gm6:l, 5gmk:l, 5gmk:y, 6j6g:l, 6j6g:y, 6j6h:l, 6j6h:y, 6j6n:l, 6j6n:y, 6j6q:l, 6j6q:y, 3jcm:J, 3jcm:R, 5lj3:d, 5lj3:n, 5lj5:d, 5lj5:n, 5mps:d, 5mq0:n, 5mq0:d, 6n7p:N, 6n7r:N, 6n7x:N, 5nrl:v, 5nrl:n, 5nrl:d, 7oqb:v, 7oqc:d, 7oqe:d, 7oqe:v, 8w2o:N, 5wsg:l, 5wsg:U, 5y88:e, 5y88:l, 5ylz:e, 5ylz:l, 5zwm:S, 5zwm:d, 5zwm:l, 5zwn:d, 5zwo:d, 5zwo:S
5 6qw6:64 73 72 0.2963 0.3288 0.3333 3.61e-11 6qx9:64
6 6ppn:D 88 72 0.2716 0.2500 0.3056 2.88e-08 6ppn:L, 6ppp:D, 6ppp:L, 6ppq:D, 6ppv:D
7 6v4x:C 114 69 0.2469 0.1754 0.2899 5.80e-06
8 5gan:4 74 71 0.2593 0.2838 0.2958 6.28e-06 4m7a:N, 4m7a:G, 4m7d:N, 5nrl:j, 5vsu:D
9 8ro0:c 80 71 0.2716 0.2750 0.3099 7.17e-06 8ro1:c
10 3jb9:F 82 71 0.2469 0.2439 0.2817 8.05e-06 3jb9:f
11 5nrl:l 99 71 0.3086 0.2525 0.3521 4.34e-05 6bk8:h, 7dco:m, 6exn:h, 6g90:t, 5gam:h, 5gan:l, 5gan:h, 5gao:l, 5gm6:m, 5gmk:m, 5gmk:z, 5lj3:h, 5lj3:l, 5lj5:h, 5lj5:l, 5mps:h, 5mq0:h, 5nrl:t, 5nrl:h, 7oqb:t, 7oqe:t, 5wsg:m, 5wsg:V, 5y88:f, 5y88:m, 5ylz:f, 5ylz:m, 5zwm:Q, 5zwm:m, 5zwo:Q, 5zwo:m
12 7abg:g 93 71 0.2840 0.2473 0.3239 4.89e-05 7a5p:n, 7abg:n, 7abi:n, 7abi:g, 6ah0:V, 6ahd:b, 7b0y:k, 8c6j:l, 8c6j:c, 8ch6:k, 8ch6:5, 7dvq:c, 7dvq:j, 9fmd:c, 9fmd:j, 8h6e:5b, 8h6e:4b, 8h6j:5b, 8h6j:4b, 8h6k:5b, 8h6l:5b, 8i0p:b, 8i0p:n, 8i0r:b, 8i0r:n, 8i0s:b, 8i0s:n, 8i0t:b, 8i0t:n, 8i0u:b, 8i0u:n, 8i0v:b, 8i0v:n, 8i0w:b, 8i0w:j, 6icz:j, 6id0:j, 6id1:j, 5mqf:g, 5o9z:n, 5o9z:g, 4pjo:C, 4pjo:c, 4pjo:Q, 4pjo:q, 8q7q:a, 8q7v:a, 8q7w:a, 8q7x:a, 8q91:i, 6qdv:l, 6qdv:h, 8qo9:21, 8qo9:51, 8qo9:41, 7qtt:k, 6qw6:41, 6qw6:51, 6qx9:11, 6qx9:51, 6qx9:21, 6qx9:41, 8qxd:21, 8qxd:41, 8qxd:51, 8qzs:51, 8qzs:21, 8r08:11, 8r08:41, 8r08:21, 8r08:51, 8r09:21, 8r09:51, 8r09:41, 8r0a:51, 8r0a:21, 8r0a:41, 8r0b:21, 8r0b:41, 8r0b:51, 8rc0:i, 8rm5:21, 8rm5:51, 8rm5:41, 8ro2:c, 7vpx:h, 7w59:c, 7w59:j, 7w5a:c, 7w5a:j, 7w5b:c, 7w5b:j, 4wzj:C, 4wzj:J, 4wzj:Q, 4wzj:CC, 4wzj:JJ, 4wzj:QQ, 4wzj:CCC, 4wzj:JJJ, 4wzj:QQQ, 4wzj:CCCC, 4wzj:JJJJ, 4wzj:QQQQ, 5xjc:c, 5xjc:j, 8y6o:b, 8y6o:i, 8y6o:p, 8y7e:j, 5yzg:c, 5yzg:j, 5z56:c, 5z56:j, 5z57:c, 5z57:j, 5z58:c, 5z58:j
13 6aso:D 59 71 0.2346 0.3220 0.2676 2.07e-04
14 6ppq:F 71 66 0.2222 0.2535 0.2727 0.018 6ppn:F, 6ppn:N, 6ppp:F, 6ppp:N, 6ppv:F
15 6g90:h 107 86 0.2716 0.2056 0.2558 0.019 6exn:l, 7oqc:h, 7oqe:h
16 4wzj:MM 80 66 0.2469 0.2500 0.3030 0.022 7abg:b, 7abi:b, 6ahd:Q, 6ahd:d, 7b0y:f, 8c6j:q, 8c6j:f, 8ch6:h, 8ch6:2, 7dvq:f, 7dvq:m, 9fmd:m, 9fmd:f, 8h6e:5d, 8h6e:4d, 8h6j:5d, 8h6j:4d, 8h6k:5d, 8h6k:4d, 8h6l:5d, 8h6l:4d, 8i0p:d, 8i0r:d, 8i0s:d, 8i0s:i, 8i0t:d, 8i0t:i, 8i0u:d, 8i0u:i, 8i0v:d, 8i0v:i, 8i0w:d, 8i0w:m, 6id1:f, 5mqf:i, 5mqf:b, 5o9z:i, 4pjo:F, 4pjo:f, 4pjo:T, 4pjo:t, 8q7q:f, 8q7v:f, 8q7w:f, 8q7x:f, 8q91:m, 6qdv:q, 6qdv:f, 8qo9:2f, 8qo9:5f, 8qo9:4f, 7qtt:h, 6qw6:4f, 6qw6:5f, 6qx9:1f, 6qx9:5f, 6qx9:2f, 6qx9:4f, 8qxd:2f, 8qxd:4f, 8qxd:5f, 8qzs:5f, 8qzs:2f, 8qzs:4f, 8r08:1f, 8r08:2f, 8r08:4f, 8r08:5f, 8r09:2f, 8r09:5f, 8r09:4f, 8r0a:5f, 8r0a:2f, 8r0a:4f, 8r0b:2f, 8r0b:4f, 8r0b:5f, 8rc0:m, 8rm5:2f, 8rm5:5f, 8rm5:4f, 8ro2:f, 6v4x:F, 7vpx:m, 7w59:f, 7w59:m, 7w5a:f, 7w5a:m, 7w5b:f, 7w5b:m, 4wzj:F, 4wzj:M, 4wzj:T, 4wzj:FF, 4wzj:TT, 4wzj:FFF, 4wzj:MMM, 4wzj:TTT, 4wzj:FFFF, 4wzj:MMMM, 4wzj:TTTT, 5xjc:f, 5xjc:m, 8y6o:f, 8y6o:m, 8y6o:t, 8y7e:m, 5yzg:f, 5yzg:m, 5z56:m, 5z57:m, 5z58:m
17 6j6g:m 119 98 0.3210 0.2185 0.2653 0.025 7b9v:l, 7b9v:h, 6j6g:z, 6j6h:m, 6j6h:z, 6j6n:m, 6j6n:z, 6j6q:m, 6j6q:z, 6n7p:L, 6n7r:L, 6n7x:L, 8w2o:L, 5zwn:b
18 6qw6:66 72 66 0.2222 0.2500 0.2727 0.032 6qx9:66
19 6qw6:62 95 47 0.1975 0.1684 0.3404 0.054 6ahd:q, 8h6e:6a, 8h6j:6a, 8h6k:6a, 8h6l:6a, 6qx9:62
20 8ro0:f 72 67 0.2469 0.2778 0.2985 0.068 8ro1:f
21 1aqh:A 448 20 0.1358 0.0246 0.5500 1.4 1aqm:A, 1b0i:A, 8cqf:A, 8cqg:A, 1g94:A, 1g9h:A, 1jd7:A, 1jd9:A, 1kxh:A, 1l0p:A
22 8iof:C 792 38 0.1852 0.0189 0.3947 1.5 8iof:A, 8iof:B, 8iof:D
23 4p86:A 177 60 0.1975 0.0904 0.2667 1.6 4p86:B, 4p86:C, 4p86:D
24 6gfa:A 378 74 0.2593 0.0556 0.2838 1.7
25 4dur:A 756 34 0.1235 0.0132 0.2941 1.7 1b2i:A, 1bui:A, 1cea:A, 1cea:B, 1ceb:A, 1ceb:B, 4cik:A, 6d3x:A, 6d3x:B, 6d3y:A, 6d3z:A, 6d40:A, 2doh:X, 2doi:X, 2doi:A, 4dur:B, 8f7u:A, 8f7u:B, 8f7v:A, 8f7v:B, 1hpk:A, 1i5k:A, 1i5k:B, 1ki0:A, 1pk4:A, 1pkr:A, 2pk4:A, 6q1u:A, 6q1u:B, 7ths:A, 7ths:B, 7uah:A, 7uah:B, 5ugd:A, 5ugg:A
26 6iv9:A 874 42 0.1481 0.0137 0.2857 2.3 6iv8:A, 6iv8:C
27 1u7j:A 49 25 0.1481 0.2449 0.4800 3.7 1u7j:B
28 1kc7:A 872 40 0.1358 0.0126 0.2750 5.2
29 5euj:E 556 45 0.1481 0.0216 0.2667 9.1 5euj:A, 5euj:B, 5euj:C, 5euj:D, 5euj:F, 5euj:G, 5euj:H, 5euj:I, 5euj:J, 5euj:K, 5euj:L, 5euj:M, 5euj:N, 5euj:O, 5euj:P, 5euj:Q, 5euj:R, 5euj:S, 5euj:T, 5euj:U, 5euj:V, 5euj:W, 5euj:X
30 5es4:B 674 24 0.1111 0.0134 0.3750 9.4 5e6r:B, 5e6s:B, 5e6s:D, 5e6s:F, 5e6u:B, 5es4:D, 5es4:F, 5es4:H, 3k6s:B, 3k6s:D, 3k6s:F, 3k6s:H, 3k71:B, 3k71:D, 3k71:F, 3k71:H, 3k72:B, 3k72:D, 4neh:B, 4nen:B, 7usl:B, 7usm:B

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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