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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
MNTISILSTTDLPAAWQIEQRAHAFPWSEKTFFGNQGERYLNLKLTADDRMAAFAITQVVLDEATLFNIAVDPDFQRRGL
GRMLLEHLIDELETRGVVTLWLEVRASNAAAIALYESLGFNEATIRRNYYPTAQGHEDAIIMALPISMKLH

The query sequence (length=151) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2cnm:A 151 151 1.0000 1.0000 1.0000 3.31e-111 2cnm:B, 2cnm:C, 2cns:A, 2cns:B, 2cns:C, 2cnt:A, 2cnt:B, 2cnt:C, 2cnt:D
2 5c88:A 158 80 0.2119 0.2025 0.4000 1.97e-09 6ag4:A, 6ag5:A, 5c88:B, 4lx9:A, 4r3k:A, 4r3l:A, 2x7b:A
3 3dr8:A 173 53 0.1523 0.1329 0.4340 2.93e-06 3dr8:B
4 4pv6:G 154 68 0.1523 0.1494 0.3382 5.36e-06 4pv6:C, 4pv6:I, 4pv6:F, 4pv6:A, 4pv6:H, 4pv6:J, 4pv6:E
5 2ob0:C 166 57 0.1258 0.1145 0.3333 9.06e-06 2ob0:A, 2ob0:B, 6ppl:A, 2psw:A, 2psw:B, 2psw:C, 3tfy:A, 3tfy:B, 3tfy:C, 6wf3:A, 6wf3:B, 6wf3:C, 6wf3:D, 6wf3:E, 6wf3:F, 6wf5:A, 6wf5:B, 6wfg:A, 6wfg:C, 6wfg:E, 6wfk:A, 6wfk:B, 6wfk:C, 6wfn:A, 6wfo:A, 6wfo:B, 6wfo:C, 4x5k:A
6 8g0l:A 158 70 0.1589 0.1519 0.3429 1.08e-05 7stx:A, 6vp9:A
7 6zmp:A 190 89 0.1788 0.1421 0.3034 1.13e-05 6zmp:B
8 2ge3:A 164 78 0.1589 0.1463 0.3077 3.70e-05 2ge3:B, 2ge3:C
9 3ld2:B 162 75 0.1589 0.1481 0.3200 4.00e-05 3ld2:A, 3ld2:C, 3ld2:D
10 7wx5:A 288 58 0.1457 0.0764 0.3793 4.64e-05 7wx6:A, 7wx7:A
11 1tiq:A 173 52 0.1325 0.1156 0.3846 5.45e-05 1tiq:B
12 7l1k:A 149 136 0.2384 0.2416 0.2647 5.64e-05
13 2c27:A 301 90 0.1987 0.0997 0.3333 6.99e-05 1ozp:A, 1p0h:A
14 4jwp:A 165 57 0.1523 0.1394 0.4035 7.62e-05
15 6z00:A 156 52 0.1126 0.1090 0.3269 8.79e-05 6yzz:A, 6z00:B
16 6ao7:A 153 63 0.1325 0.1307 0.3175 1.55e-04
17 4qvt:D 146 62 0.1192 0.1233 0.2903 1.77e-04 2pdo:H, 2pdo:B, 4qvt:A, 4qvt:B, 4qvt:C, 4qvt:E, 4qvt:F, 4qvt:G, 4qvt:H
18 6ygb:A 159 79 0.1589 0.1509 0.3038 2.17e-04 6ygc:A, 6ygd:A
19 7daj:B 150 57 0.1258 0.1267 0.3333 2.37e-04 7daj:A, 7dak:A, 7dak:B, 7dal:A, 7dal:B
20 5t7e:D 175 88 0.1656 0.1429 0.2841 3.03e-04 5t7d:A, 5t7d:B, 5t7d:C, 5t7d:D, 5t7e:A, 5t7e:B, 5t7e:C
21 5hgz:A 211 87 0.1589 0.1137 0.2759 4.59e-04 5hh0:A, 5hh1:A, 5icv:A, 5icv:B, 5icw:A, 5icw:B, 5icw:C, 5icw:D
22 7mx2:A 152 121 0.2053 0.2039 0.2562 0.001 7rb3:A
23 7ypv:A 172 83 0.2119 0.1860 0.3855 0.001 7ypu:A, 7ypu:B, 7ypu:C, 7ypu:D, 7ypu:E, 7ypu:F, 7ypu:G, 7ypu:H, 7ypv:B, 7ypv:C, 7ypv:D, 7ypv:E, 7ypv:F, 7ypv:G, 7ypv:H
24 1wwz:A 157 55 0.1391 0.1338 0.3818 0.002 1wwz:B
25 1i1d:D 161 112 0.1722 0.1615 0.2321 0.002 1i12:A, 1i12:B, 1i12:C, 1i12:D, 1i1d:A, 1i1d:B, 1i1d:C
26 3f0a:A 159 75 0.1060 0.1006 0.2133 0.003 3k9u:A, 3k9u:B, 3ne7:A
27 8iyo:D 163 58 0.1258 0.1166 0.3276 0.003 8iyo:A, 8iyo:B, 8iyo:C
28 1yvk:A 152 65 0.1126 0.1118 0.2615 0.005 1yvk:B, 1yvk:C, 1yvk:D
29 2j8m:A 171 53 0.1192 0.1053 0.3396 0.005 2bl1:A, 2j8m:B, 2j8r:A, 2j8r:B
30 3exn:A 154 105 0.2053 0.2013 0.2952 0.008
31 5nnp:B 179 57 0.1589 0.1341 0.4211 0.009 5nnp:F
32 6bvc:A 154 70 0.1126 0.1104 0.2429 0.012 1bo4:A, 1bo4:B
33 6e1x:C 176 57 0.1192 0.1023 0.3158 0.016 5cnp:B, 5cnp:D, 5cnp:F, 6cx8:A, 6cx8:B, 6cx8:C, 6cx8:D, 6cx8:E, 6cx8:F, 6e1x:A, 6e1x:B, 6e1x:D, 4mhd:A, 4mhd:B, 4mhd:C, 4mi4:A, 4mi4:B, 4mi4:C, 4ncz:A, 4ncz:C, 4ncz:B, 4r57:A, 4r57:B, 4r57:C, 4r57:D, 4r57:E, 4r57:F, 4r57:G, 4r57:H, 4r57:I, 4r57:J, 4r57:K, 4r57:L, 4r87:A, 4r87:B, 4r87:C, 4r87:D, 4r87:E, 4r87:F, 4r87:G, 4r87:H, 4r87:I, 4r87:J, 4r87:K, 4r87:L, 5ug4:A, 5ug4:B, 5ug4:C, 4ygo:A, 4ygo:C, 4ygo:D, 4ygo:E
34 5hmn:B 159 78 0.1457 0.1384 0.2821 0.028 5hmn:A, 5hmn:C, 5hmn:E, 5hmn:F
35 2cy2:A 174 56 0.1325 0.1149 0.3571 0.028
36 5dwn:A 181 58 0.1192 0.0994 0.3103 0.030 5dwn:B, 5dwn:C, 5dwn:D
37 2i79:A 171 123 0.2185 0.1930 0.2683 0.035 2i79:B, 2i79:C, 2i79:D, 2i79:E, 2i79:F
38 3f8k:A 131 88 0.1457 0.1679 0.2500 0.067
39 3owc:A 172 80 0.1656 0.1453 0.3125 0.070 3owc:B
40 4kvm:E 153 77 0.1788 0.1765 0.3506 0.072 4kvm:F, 4kvm:G, 4kvm:H, 4kvo:E, 4kvo:F, 4kvo:G, 4kvo:H, 4kvx:A, 4kvx:B
41 4jxr:B 185 53 0.0927 0.0757 0.2642 0.077
42 5xun:B 171 73 0.1523 0.1345 0.3151 0.096 5xun:A
43 6b3t:A 396 85 0.1722 0.0657 0.3059 0.11 6b0u:A, 6b0u:B, 6b0u:C, 8d1r:A, 8d23:A, 8d25:A, 5ebv:A, 5ec4:A, 8f4a:A, 8f4t:A, 8f4u:A, 8f4w:A, 8f4z:A, 8f51:A, 8f55:A, 8f57:A, 8f58:A, 5iv0:A, 4jd6:A, 4jd6:B, 4jd6:C, 4jd6:D, 4jd6:E, 4jd6:F, 6p3t:A, 6p3u:A, 6p3v:A, 3r1k:A, 3ryo:A, 3ryo:B, 3ryo:C, 3ryo:D, 3ryo:E, 3ryo:F, 3ryo:G, 3ryo:H, 3ryo:I, 3ryo:J, 3ryo:K, 3ryo:L, 5tvj:A, 6vur:A, 6vus:A, 6vut:A, 6vuu:A, 6vuw:A, 6vux:A, 6vuy:A, 6vuz:A, 6vv0:A, 6vv1:A, 6vv2:A, 6vv3:A, 6x10:A, 6x6g:AAA, 6x6i:AAA, 6x6y:AAA, 6x7a:AAA
44 3zj0:A 202 50 0.1192 0.0891 0.3600 0.20
45 3pp9:A 176 57 0.1060 0.0909 0.2807 0.28 3pp9:B, 3pp9:C
46 7q3a:B 340 54 0.1325 0.0588 0.3704 0.31 7q3a:A
47 2jlm:F 180 115 0.1854 0.1556 0.2435 0.32
48 2bsw:A 145 57 0.1192 0.1241 0.3158 0.33 2jdc:A, 2jdd:A
49 7k0a:A 196 56 0.1258 0.0969 0.3393 0.33 7k09:A, 7k09:B, 7k09:C, 7k09:D, 7k09:E, 7k09:F, 7k0a:B
50 6yug:A 143 66 0.1060 0.1119 0.2424 0.39 6yug:B
51 5f47:B 152 130 0.1987 0.1974 0.2308 0.40 5f47:A, 5f48:A, 5f48:B, 5f49:A, 5f49:B, 5f49:C, 5f49:D, 5u08:A, 5u08:B, 5u08:C, 5u08:D
52 6sjy:B 175 91 0.1656 0.1429 0.2747 0.41 6sjy:A, 6sjy:C, 6sk1:A, 6sl8:A, 6sll:A, 6sll:B
53 8a9n:A 150 64 0.1126 0.1133 0.2656 0.48 8a9n:B, 8a9o:A, 8a9o:B
54 2q0y:A 153 59 0.1060 0.1046 0.2712 0.74
55 2vi7:C 165 62 0.1258 0.1152 0.3065 1.4
56 3b8g:A 424 40 0.0927 0.0330 0.3500 1.8 3d2m:A, 3d2p:A, 3d2p:B, 4i49:A, 2r8v:A, 2r98:A
57 2bei:A 156 59 0.1060 0.1026 0.2712 2.1 2q4v:A
58 3ajy:A 133 32 0.0795 0.0902 0.3750 2.3 3ajy:C
59 2yw2:A 423 126 0.2053 0.0733 0.2460 2.5 2yw2:B
60 7aih:Ah 452 54 0.0993 0.0332 0.2778 2.9 7ane:Ah
61 5wph:A 179 46 0.0861 0.0726 0.2826 3.0 6m7g:A, 6m7g:C, 6m7g:B, 6m7g:D, 6m7g:E, 6m7g:F, 6m7g:L, 5wph:B
62 6th0:A 176 86 0.1325 0.1136 0.2326 3.4 6tgx:A, 6tgx:B, 6th0:B
63 4my0:C 392 58 0.0861 0.0332 0.2241 4.1 4my0:A, 4my0:E, 4my0:B, 4my0:D, 4my0:F
64 1ghe:B 171 88 0.1788 0.1579 0.3068 4.2 1ghe:A, 1j4j:A, 1j4j:B
65 7ovv:B 196 52 0.1060 0.0816 0.3077 4.2 7ovv:A
66 5kf2:A 317 38 0.0795 0.0379 0.3158 4.6 5kf1:A, 5kf1:B, 5kf8:A, 5kf9:A, 5kga:A, 5kga:B, 5kgh:A, 5kgh:B, 5kgj:A, 5kgp:A, 5kgp:B
67 3qdh:A 271 49 0.1126 0.0627 0.3469 4.7
68 6wqc:A 293 112 0.1589 0.0819 0.2143 6.4 6wqb:A
69 7aih:X 468 37 0.0795 0.0256 0.3243 6.8 7ane:X
70 1s5k:A 153 57 0.0927 0.0915 0.2456 7.0 1s3z:A, 1s3z:B, 1s5k:B, 1s60:A, 2vbq:A, 2vbq:B
71 6hiv:Ab 453 37 0.0861 0.0287 0.3514 8.8 6hix:Ab

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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