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BioLiP
>protein
MLYLIIYDVPATKAGNKRRTRLFDLLSGYGKWRQFSVFECFLSVKQFAKLQTAMEKLIKLDEDAVCIYVLDENTVQRTIT
YGTPQPEKPGSII

The query sequence (length=93) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 7cr8:M 93 93 1.0000 1.0000 1.0000 1.41e-66 7cr6:E, 7cr6:F, 7cr8:N, 7cr8:U, 7cr8:V, 7cr8:e, 7cr8:f, 7cr8:m, 7cr8:n, 7cr8:u, 7cr8:v, 7cr8:E, 7cr8:F
2 7mi4:E 95 66 0.2473 0.2421 0.3485 9.65e-09 7mi4:F, 7mi5:E, 7mi5:F, 7mi9:E, 7mi9:F, 7mib:F, 7mib:E, 7mid:C, 7mid:D
3 8d3p:E 100 74 0.2903 0.2700 0.3649 1.39e-08 8d3l:F, 8d3l:E, 8d3m:F, 8d3m:E, 8d3p:F, 8d3q:F, 8d3q:E
4 6cgs:A 207 51 0.1720 0.0773 0.3137 2.0 6cgs:B
5 4aw2:A 398 36 0.1183 0.0276 0.3056 2.1
6 5otf:A 411 32 0.1183 0.0268 0.3438 4.4 5ote:A, 3qfv:A, 3qfv:B, 3tku:A, 3tku:B, 4uak:A, 4ual:A
7 1i2k:A 269 54 0.1613 0.0558 0.2778 4.8 1et0:A, 1i2l:A
8 8u9x:A 1398 51 0.1720 0.0114 0.3137 4.9 6blo:A, 6blp:A, 6bm2:A, 6bm4:A, 6bqf:A, 1i6h:A, 7ked:A, 1nik:A, 1r5u:A, 1r9s:A, 7rim:A, 7rip:A, 7riw:A, 7rix:A, 7riy:A, 8u9r:A, 8ukq:A, 8ukr:A, 8uks:A, 8ukt:A, 8uku:A, 6upx:A, 6upy:A, 6upz:A, 6uq0:A, 6uq1:A, 6uq2:A, 6uq3:A, 5w4u:A, 5w51:A
9 7ebl:B 167 58 0.1720 0.0958 0.2759 6.3 7ebl:A
10 6ene:A 329 25 0.1075 0.0304 0.4000 6.7 6ene:C, 6ene:B
11 8pyz:F 347 25 0.1075 0.0288 0.4000 7.4 5nup:A, 5nup:B, 5nup:C, 5o79:C, 5o79:A, 5o79:B, 8pyz:E, 8pyz:C, 7q3t:A, 7q3t:B, 7q3t:C, 7q3t:E, 7q3t:D, 7q3t:F, 6rck:C, 6rd3:A, 6rd3:B, 6rd3:C, 6rd3:D, 6rd3:E, 6rd3:F, 7szi:C
12 6m0q:A 504 48 0.1720 0.0317 0.3333 7.6 4fas:A, 4fas:C, 4fas:B, 1fgj:A, 1fgj:B, 6m0p:A, 6m0p:C, 6m0p:E, 6m0q:C, 6m0q:E, 6m0q:G, 6m0q:I, 6m0q:K, 4n4n:A, 4n4n:C, 4n4n:E, 4n4o:A, 4n4o:C, 4n4o:E
13 5ab6:D 396 47 0.1505 0.0354 0.2979 9.5 5ab6:A, 5ab6:B, 5ab6:C, 5ab6:E, 5ab6:F, 5ab7:A, 5ab7:B, 5ab7:C, 5ab7:D, 5ab7:E, 5ab7:F

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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