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BioLiP
>protein
MLLFCPGCGNGLIVEEGQRCHRFACNTCPYVHNITRKVTNRKYPKLKEVDDVLGGA

The query sequence (length=56) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 7d59:I 108 56 0.9821 0.5093 0.9821 2.28e-37 7a6h:I, 7ae1:I, 7ae3:I, 7aea:I, 7dn3:I, 7du2:I, 7fji:I, 7fjj:I, 8ity:I, 8iue:I, 8iuh:I
2 7z0h:I 110 58 0.4643 0.2364 0.4483 1.00e-08 8bws:I, 6cnb:I, 6cnc:I, 6cnd:I, 6cnf:I, 6eu0:I, 6eu1:I, 6eu2:I, 6eu3:I, 6f40:I, 6f41:I, 6f42:I, 5fj8:I, 6tut:I, 7z1l:I, 7z1m:I, 7z1o:I, 7z2z:I, 7z30:I, 7z31:I
3 5fj9:I 92 31 0.2500 0.1522 0.4516 0.002 5fja:I
4 6o3p:B 320 46 0.2857 0.0500 0.3478 0.017
5 6scx:A 328 49 0.3036 0.0518 0.3469 0.017 6o3p:A, 6scx:B, 6scx:C
6 1zt2:A 327 50 0.2679 0.0459 0.3000 0.19 5of3:A, 5of3:D, 5ofn:A, 1zt2:C
7 6tmf:Z 50 29 0.1964 0.2200 0.3793 0.75
8 2k4x:A 55 28 0.1964 0.2000 0.3929 0.77
9 4zyn:B 385 14 0.1786 0.0260 0.7143 0.99 4k7d:A, 4k7d:B, 4k7d:C, 4k95:A, 4k95:B, 4k95:C, 4k95:D, 4k95:E, 4k95:F, 4k95:G, 4k95:H, 4k95:I, 4k95:J, 4k95:K, 4k95:L, 7us1:A, 8w31:A, 4zyn:A
10 5jb3:Y 50 29 0.1964 0.2200 0.3793 1.5 5jbh:Y, 6sw9:Y, 6swc:Y, 6swe:Y, 4v4n:BY, 4v6u:AY, 7zag:Y, 7zah:Y, 7zai:Y, 7zhg:Y
11 7oqy:Y 92 33 0.1786 0.1087 0.3030 3.1
12 5caw:C 315 26 0.2143 0.0381 0.4615 3.7 5caw:A
13 2rhp:A 622 42 0.2679 0.0241 0.3571 3.8 1yo8:A
14 4kyw:A 254 27 0.1786 0.0394 0.3704 3.9 4esj:A, 4esj:B
15 4h6d:B 329 36 0.2143 0.0365 0.3333 6.1 4h67:B, 4h6d:A, 4h6d:E, 4h6d:H
16 3cng:C 178 37 0.2321 0.0730 0.3514 6.4 3cng:A, 3cng:B, 3cng:D
17 6zj3:LW 208 22 0.1607 0.0433 0.4091 6.7
18 6djw:A 317 27 0.2500 0.0442 0.5185 7.3 6djx:A
19 8ow6:A 149 27 0.1786 0.0671 0.3704 8.5 8ow6:C
20 6skl:4 679 42 0.2143 0.0177 0.2857 9.4 8kg9:4, 8xgc:4
21 8kg8:4 697 42 0.2143 0.0172 0.2857 9.4 8b9a:4, 8b9b:4, 8b9c:4, 8kg6:4, 8p5e:4, 8p62:4, 8p63:4, 7pmk:4, 7pmn:4, 7qhs:4, 6sko:4, 8w7m:4, 7z13:4, 7z13:c
22 5v8f:4 741 42 0.2143 0.0162 0.2857 9.4 5bk4:C, 5bk4:4, 6eyc:4, 6f0l:C, 3ja8:4, 7p30:4, 7p30:C, 7p5z:C, 7p5z:4, 7pt6:4, 7pt6:D, 7pt7:4, 7pt7:D, 6rqc:4, 7v3u:4, 7v3u:D, 7v3v:4, 7v3v:D, 7w8g:4, 7w8g:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417