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BioLiP
>protein
MKTAISLPDETFDRVSRRASELGMSRSEFFTKAAQRYLHELDAQLLTGQ

The query sequence (length=49) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 7wnr:B 49 49 1.0000 1.0000 1.0000 6.13e-31 7wnr:C
2 5n0c:A 1293 31 0.2245 0.0085 0.3548 1.2 1dfq:A, 1diw:A, 1dll:A, 1fv2:A, 1fv3:A, 1fv3:B, 3hmy:A, 3hn1:A, 5n0b:A, 5n0c:B, 1yxw:A, 1yyn:A, 1z7h:A
3 2ct8:A 465 29 0.2041 0.0215 0.3448 1.9 2csx:A, 2csx:B, 2ct8:B
4 6u1d:B 326 20 0.1837 0.0276 0.4500 2.6 6u1d:A, 6u1e:A, 6u1e:B, 6u1f:A, 6u1f:B, 6u1g:A, 6u1g:B, 6u1h:A, 6u1h:B, 6u1h:C, 6u1i:C, 6u1j:A, 6u1j:C, 6u1k:A, 6u1k:B, 6u1k:C, 6u1k:D, 2yzm:A, 2yzm:B, 2yzm:C, 2yzn:A, 2yzn:B, 2yzn:C, 2zdg:A, 2zdg:B, 2zdg:C, 2zdg:D, 2zdh:A, 2zdh:B, 2zdh:C, 2zdh:D, 2zdq:A, 2zdq:B
5 8c3a:q 190 40 0.2653 0.0684 0.3250 2.9 8c3a:BD, 8cq7:q, 8cq7:BD, 8cqw:q, 8cqw:BD, 8cre:q, 8cre:BD, 8oeq:q, 8oeq:BD, 7pzy:q, 7q08:q, 7q0f:q, 7q0p:q, 7q0r:q, 8q5i:q
6 8yif:A 537 15 0.2041 0.0186 0.6667 3.6 8yie:A, 8yie:B
7 3l2k:A 352 41 0.2653 0.0369 0.3171 3.6 3l2k:B
8 6u1h:D 305 20 0.1837 0.0295 0.4500 4.4 6u1i:A
9 8wd8:A 750 18 0.1837 0.0120 0.5000 4.6 8jsi:A, 8jsi:B, 8wd8:B
10 3tao:A 256 14 0.1837 0.0352 0.6429 5.7
11 7ooc:J 114 24 0.1633 0.0702 0.3333 6.1 7p6z:J, 7pah:J, 7pai:J, 7paj:J, 7pak:J, 7pal:J, 7pam:J, 7pan:J, 7pao:J, 7paq:J, 7par:J, 7pas:J, 7ph9:J, 7pha:J, 7phb:J, 7phc:J, 7pi8:J, 7pi9:J, 7pia:J, 7pib:J, 7pic:J, 7pio:J, 7pip:J, 7piq:J, 7pir:J, 7pis:J, 7pit:J
12 5n6x:B 400 34 0.2245 0.0275 0.3235 6.2 5n6x:A
13 4hpn:A 378 25 0.2245 0.0291 0.4400 6.5 4ggb:A
14 3uq8:A 322 26 0.1837 0.0280 0.3462 9.6 3bac:A, 3pn1:A, 4uco:A, 4ucr:A, 4ucs:A, 4uct:A, 4ucu:A, 4ucv:A, 4ufz:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417