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BioLiP
>protein
MKLITAIVKPFTLTDIKDALEQAGVQGMTVTETQGFVDFVPKVKIEVIISDAQAEEVINIIVETARTGKVGDGKVWMTNI
EELVRVRTGERGEAAL

The query sequence (length=96) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 6yc7:A 105 105 1.0000 0.9143 0.9143 3.58e-61 6yc7:B, 6yc7:E, 6yc7:C
2 6yc7:F 94 96 0.9792 1.0000 0.9792 1.52e-60
3 3lf0:A 99 97 0.6458 0.6263 0.6392 3.57e-40
4 3lf0:B 112 111 0.6562 0.5625 0.5676 8.41e-39 3lf0:C
5 2eg2:A 95 96 0.5729 0.5789 0.5729 6.37e-35
6 2gnk:A 95 96 0.5417 0.5474 0.5417 7.57e-34
7 2ns1:B 113 112 0.5521 0.4690 0.4732 1.71e-32 2nuu:G, 2nuu:H, 2nuu:I, 2nuu:J, 2nuu:K, 2nuu:L
8 5l9n:A 92 93 0.4688 0.4891 0.4839 1.95e-29
9 4cnz:A 100 100 0.5000 0.4800 0.4800 3.70e-29 4cny:A, 4cnz:B, 4cnz:D, 4co4:A, 4co4:C, 4co4:B, 3o5t:B, 5ovo:B
10 4cnz:E 112 112 0.5104 0.4375 0.4375 2.28e-28 4cnz:C, 4cnz:F, 4co0:A, 4co0:B, 4co1:A, 4co1:B, 4co2:A, 4co2:B, 4co3:A, 4co3:B, 3mhy:A, 3mhy:C, 3mhy:B
11 4c3k:D 101 98 0.4792 0.4554 0.4694 1.12e-27 4c3k:A, 4c3k:E, 8wm7:F, 2xzw:E
12 2o66:B 108 92 0.4479 0.3981 0.4674 6.43e-27 2o66:A, 2o66:C, 2o67:A, 2o67:B, 2o67:C
13 7p4v:A 113 112 0.5312 0.4513 0.4554 7.00e-27
14 8wm7:G 94 93 0.4271 0.4362 0.4409 5.27e-26
15 1ul3:B 94 96 0.4375 0.4468 0.4375 9.72e-26 1ul3:C
16 2j9d:B 103 99 0.5000 0.4660 0.4848 1.21e-25 2j9d:H, 2j9d:K
17 3n5b:A 112 112 0.4479 0.3839 0.3839 6.40e-25 8wm7:E
18 2xbp:A 113 112 0.4792 0.4071 0.4107 6.72e-25 4aff:A, 4c3k:C, 4c3k:F, 2xul:A, 2xul:B, 2xul:C, 2xul:D, 2xul:E, 2xul:F, 2xzw:A, 2xzw:B, 2xzw:C, 2xzw:D, 2xzw:F, 2xzw:G, 2xzw:H, 2xzw:I
19 7p50:A 121 112 0.4896 0.3884 0.4196 4.88e-24 7p50:B, 7p50:C
20 2j9e:B 119 112 0.5000 0.4034 0.4286 7.64e-24 2j9c:A, 2j9c:C, 2j9c:B, 2j9d:C, 2j9d:E, 2j9d:F, 2j9d:I, 2j9d:J, 2j9d:L, 2j9e:A, 2j9e:C, 7p52:A
21 3ta0:C 99 97 0.4583 0.4444 0.4536 9.97e-24 3ta0:A, 3ta0:B, 3ta0:D, 3ta0:E, 3ta0:F
22 3ncr:C 116 112 0.4896 0.4052 0.4196 6.45e-23 3ncq:A, 3ncq:B, 3ncq:C, 3ncr:A, 3ncr:B
23 2rd5:D 126 109 0.4479 0.3413 0.3945 2.47e-22 2rd5:C
24 3ta1:D 115 111 0.4583 0.3826 0.3964 2.01e-21 3ta1:A, 3ta1:C, 3ta1:B, 3ta1:E, 3ta1:F, 3ta2:A, 3ta2:B, 3ta2:C
25 1v3s:A 97 97 0.4167 0.4124 0.4124 9.27e-20 1v3s:B, 1v3s:C, 1v9o:A, 1v9o:B, 1v9o:C
26 7o4x:A 103 100 0.3854 0.3592 0.3700 7.96e-17
27 4ozl:A 104 97 0.4062 0.3750 0.4021 5.35e-15 4ozn:B
28 4usj:C 142 106 0.3438 0.2324 0.3113 7.81e-14 4usi:A, 4usi:C, 4usi:B, 4usj:D
29 4ozn:A 116 109 0.4167 0.3448 0.3670 1.41e-13 4ozj:A, 4ozn:C
30 4rx6:B 115 106 0.2708 0.2261 0.2453 2.40e-07 4r25:A, 4rx6:A, 4rx6:D
31 1jg1:A 215 81 0.2708 0.1209 0.3210 0.003 1jg2:A, 1jg3:A, 1jg3:B, 1jg4:A
32 2o2s:A 303 60 0.2292 0.0726 0.3667 0.75 3nj8:A, 3nj8:B, 4o1m:A, 4o1m:B, 4o1m:C, 4o1m:D, 4o1m:E, 4o1m:F, 2o2s:B
33 7d58:E 210 35 0.1562 0.0714 0.4286 1.5 8a3y:E, 8a40:E, 7ae1:E, 7ae3:E, 7aea:E, 7b0y:E, 8b3d:E, 8b3f:E, 7dn3:E, 6exv:E, 7fji:E, 7fjj:E, 6gmh:E, 6gml:E, 8gxq:PE, 8iue:E, 8iuh:E, 5iy7:E, 5iy8:E, 5iy9:E, 5iyc:E, 5iyd:E, 8oeu:E, 8oev:E, 8oew:E, 8of0:E, 5oik:E, 7okx:E, 7oky:E, 7ol0:E, 7oo3:E, 7oob:E, 7oop:E, 7opc:E, 7opd:E, 8p4a:E, 8p4b:E, 8p4f:E, 7pks:E, 8rbx:E, 8s51:E, 8s52:E, 8s54:E, 8s5n:E, 6ted:E, 8uhd:E, 7und:E, 8w8e:E, 8w8f:E, 8wak:s, 8wal:s, 8wan:s, 8wao:s, 8wap:s, 8waq:s, 8war:s, 8was:s, 8wat:s, 8wau:s, 8wav:s, 8waw:s, 8wax:s, 8way:s, 8waz:s, 8wb0:s
34 4yd9:A 1656 54 0.1354 0.0079 0.2407 1.8 4yd9:D, 4yd9:G, 4yd9:J, 4yd9:M, 4yd9:P, 4yd9:S, 4yd9:V, 4yd9:Y, 4yd9:b
35 5hha:B 272 30 0.1146 0.0404 0.3667 3.0 5hha:A
36 7yfg:B 652 36 0.1250 0.0184 0.3333 3.2 8e94:B, 7yfg:D, 7yfh:B, 7yfh:D
37 4k2m:A 442 34 0.1042 0.0226 0.2941 3.4 4k2i:A, 4k2i:B, 4k2m:B
38 7yfi:D 749 36 0.1250 0.0160 0.3333 3.5
39 6mfb:D 386 14 0.0938 0.0233 0.6429 4.5 6mfb:A, 6mfb:B, 6mfb:C
40 3ktc:A 330 20 0.0938 0.0273 0.4500 4.8 3ktc:B
41 4n8y:A 300 27 0.1354 0.0433 0.4815 5.6 4n8y:B
42 7olc:Lh 122 20 0.0938 0.0738 0.4500 6.0 8i9p:Lh, 8i9r:Lh, 8i9t:Lh, 8i9v:Lh, 8i9w:Lh, 8i9x:Lh, 8i9y:Lh, 8i9z:Lh, 8ia0:Lh, 7old:Lh, 8onz:Lh, 8oo0:Lh, 8pv1:Lh, 8pv2:Lh, 8pv3:Lh, 8pv4:Lh, 8pv5:Lh, 8pv6:Lh, 8pv7:Lh, 8pv8:Lh, 8pvk:Lh, 8pvl:Lh, 7z3n:Lh, 7z3o:Lh
43 7oik:A 4426 56 0.1771 0.0038 0.3036 6.2 7oim:A, 6tax:A, 6tay:A
44 8b6u:A 481 31 0.1354 0.0270 0.4194 6.7 8b6v:A, 8b6v:C, 8b6v:D, 8b6v:E, 8b6v:F, 8b6v:G, 8b6v:H, 8b6v:I, 8b6v:J, 8b6v:K, 8b6v:L, 8b6v:M, 8b6v:N, 8b6v:O, 8b6v:P, 8b6v:Q, 8b6v:R, 8b6v:S, 8b6v:T, 8b6v:U, 8b6v:V, 8b6v:W, 8b6w:A, 8b6w:C, 8b6w:D, 8b6w:E, 8b6w:F, 8b6w:G, 8b6w:H, 8b6w:I, 8b6w:J, 8b6w:K, 8b6w:L, 8b6w:M, 8b6w:N, 8b6w:O, 8b6w:P, 8b6w:Q, 8b6w:R, 8b6w:S, 8b6w:T, 8b6w:U, 8b6w:V
45 8dh0:F 796 38 0.1354 0.0163 0.3421 7.9
46 2ags:A 634 37 0.1562 0.0237 0.4054 8.0 2a75:A, 2fhr:A, 1mz6:A, 1n1t:A, 1n1v:A, 1n1y:A
47 7r81:B2 209 47 0.1562 0.0718 0.3191 8.4 7olc:SA, 7old:SA, 8oo0:SA, 7z3n:SA, 7z3o:SA
48 8h52:A 398 46 0.1354 0.0327 0.2826 9.9

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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