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BioLiP
>protein
MKKLREEAAKLFEEWKKLAEEAAKLLEGGGGGGGGELMKLCEEAAKKAEELFKLAEERLKKL

The query sequence (length=62) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 2jst:B 62 62 1.0000 1.0000 1.0000 1.40e-32
2 7dpt:A 556 34 0.2097 0.0234 0.3824 0.16 7dpt:B, 7dpt:C, 7dpt:D, 7dpw:A, 7dpw:B, 7dpw:C, 7dpw:D, 8i0h:A, 8i0i:A, 8i0i:C, 8i0i:D, 8i0i:E, 7wiz:A, 7wiz:B, 7wiz:C, 7wiz:D, 7wj4:D, 7wj4:A, 7wj4:B, 7wj4:C
3 5u03:A 559 32 0.1935 0.0215 0.3750 1.9 7mgz:F, 7mgz:P, 7mgz:O, 7mgz:Q, 7mh0:A, 7mh0:B, 7mh0:C, 7mh0:D, 7mif:C, 7mif:G, 7mif:H, 7mif:I, 7mig:C, 7mig:A, 7mig:B, 7mig:E, 7mip:C, 7mip:D, 7mip:G, 7mip:I, 5u03:B, 5u03:C, 5u03:D
4 4e4e:B 207 45 0.2581 0.0773 0.3556 2.5 3bfr:A, 4e4e:A, 4e4e:C, 4e4e:D, 4f6e:A, 4f6e:B, 4f6e:C, 4f6e:D, 3lsu:A, 3lsu:B, 3lsu:C, 3lsu:D, 3rn4:A
5 8tl9:D 2034 52 0.2742 0.0084 0.3269 6.4 8tla:D
6 2qp2:A 498 37 0.1613 0.0201 0.2703 6.8
7 7t3u:A 2020 52 0.2742 0.0084 0.3269 6.9 7t3u:D
8 8tkd:A 2249 52 0.2742 0.0076 0.3269 7.0 8tkd:B, 8tkd:C, 8tkd:D, 8tke:A, 8tke:B, 8tke:C, 8tke:D, 8tkg:A, 8tkg:B, 8tkg:C, 8tkg:D, 8tl9:A, 8tl9:B, 8tla:A, 8tla:B
9 7t3q:A 2103 52 0.2742 0.0081 0.3269 7.2 7t3q:B, 7t3q:C, 7t3q:D, 7t3u:B
10 8tk8:A 2268 52 0.2742 0.0075 0.3269 7.3 8tk8:B, 8tk8:C, 8tk8:D, 8tkh:A, 8tkh:B, 8tkh:C, 8tkh:D, 8tki:A, 8tki:B, 8tki:C, 8tki:D, 8tl9:C, 8tla:C
11 7t3r:A 2130 52 0.2742 0.0080 0.3269 7.4 7t3r:B, 7t3r:C, 7t3r:D, 7t3t:A, 7t3t:B, 7t3t:C, 7t3t:D
12 6dr0:C 2193 52 0.2742 0.0078 0.3269 7.4 6dqj:A, 6dqj:B, 6dqj:C, 6dqj:D, 6dqn:A, 6dqn:B, 6dqn:C, 6dqn:D, 6dqs:A, 6dqs:B, 6dqs:C, 6dqs:D, 6dqv:A, 6dqv:B, 6dqv:C, 6dqv:D, 6dqz:A, 6dqz:B, 6dqz:D, 6dqz:C, 6dr0:A, 6dr0:B, 6dr0:D, 6dr2:A, 6dr2:B, 6dr2:C, 6dr2:D, 6dra:A, 6dra:B, 6dra:C, 6dra:D, 6drc:A, 6drc:B, 6drc:C, 6drc:D
13 7t3p:A 2066 52 0.2742 0.0082 0.3269 7.5 7t3p:B, 7t3p:C, 7t3p:D
14 2qk4:B 424 43 0.1935 0.0283 0.2791 7.5 2qk4:A
15 8tkf:A 2272 52 0.2742 0.0075 0.3269 7.7 8tkf:D, 8tkf:B, 8tkf:C
16 6uqk:A 2054 52 0.2742 0.0083 0.3269 7.8 6uqk:B, 6uqk:C, 6uqk:D
17 7rkh:D 559 41 0.2742 0.0304 0.4146 8.3 7rkh:C, 7rkh:A, 7rkh:B, 7rl0:A, 7rl0:D, 7rl0:B, 7rl0:C, 7rl0:E, 7rl0:H, 7rl0:F, 7rl0:G, 7rl0:W, 7rl0:Z, 7rl0:X, 7rl0:Y, 7rl5:A, 7rl5:B, 7rl5:D, 7rl5:C, 7rl5:E, 7rl5:M, 7rl5:R, 7rl5:P, 7rl5:L, 7rl5:O, 7rl5:S, 7rl5:Q, 7rnl:B, 7rnl:C, 7rnl:D, 7rnl:A, 7rnl:H, 7rnl:K, 7rnl:N, 7rnl:E, 7rnl:I, 7rnl:L, 7rnl:O, 7rnl:F, 7rnl:J, 7rnl:M, 7rnl:P, 7rnl:G, 7rnr:A, 7rnr:B, 7rnr:F, 7rnr:E, 7rnr:Q, 7rnr:S, 7rnr:a, 7rnr:Y, 7rnr:I, 7rnr:J, 7rnr:N, 7rnr:M, 7rnr:R, 7rnr:T, 7rnr:b, 7rnr:Z, 7rnr:g, 7rnr:h, 7rnr:l, 7rnr:k
18 6pk4:A 559 26 0.1613 0.0179 0.3846 8.9 7mh1:H, 7mh1:J, 7mh1:K, 7mh1:L, 7miu:D, 7miu:C, 7miu:H, 7miu:G, 7miv:D, 7miv:C, 7miv:H, 7miv:G, 6pk4:B, 6pk4:C, 6pk4:D, 6pk7:A, 6pk7:D, 6pk7:E, 6pk7:F
19 7t3u:C 1575 40 0.2097 0.0083 0.3250 9.0
20 3zjc:E 286 24 0.1613 0.0350 0.4167 9.4 3zjc:A, 3zjc:B, 3zjc:C, 3zjc:D
21 3zjc:F 252 24 0.1613 0.0397 0.4167 9.7
22 3tqe:A 316 44 0.2742 0.0538 0.3864 9.8

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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