BioLiP

>protein
MKIRDLLKARRGPLFSFEFFPPKDPEGEEALFRTLEELKAFRPAFVSITYGAMGSTRERSVAWAQRIQSLGLNPLAHLTV
AGQSRKEVAEVLHRFVESGVENLLALRGDPPRGERVFRPHPEGFRYAAELVALIRERYGDRVSVGGAAYPEGHPESESLE
ADLRHFKAKVEAGLDFAITQLFFNNAHYFGFLERARRAGIGIPILPGIMPVTSYRQLRRFTEVCGASIPGPLLAKLERHQ
DDPKAVLEIGVEHAVRQVAELLEAGVEGVHFYTLNKSPATRMVLERLGLRP

The query sequence (length=291) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Homologs to hit
1	3apt:A	292	291	1.0000	0.9966	1.0000	0.0	3apy:A, 3apy:B, 3apy:C, 3apy:D, 3apy:E, 3apy:F, 3apy:G, 3apy:H, 8eac:A, 7th4:A, 7th4:B, 7th5:A, 7th5:B, 1v93:A
2	8uy2:D	557	295	0.3986	0.2083	0.3932	9.14e-69	8uy2:A, 8uy2:B, 8uy2:C
3	8uy1:A	598	295	0.3952	0.1923	0.3898	9.28e-68	8uy1:D, 8uy1:B, 8uy1:C
4	6fnu:A	296	292	0.3849	0.3784	0.3836	1.39e-63
5	8qa6:A	553	281	0.3780	0.1989	0.3915	7.86e-60	8qa6:B
6	6fcx:A	596	281	0.3746	0.1829	0.3879	2.55e-58	6fcx:B, 8qa4:A, 8qa4:B, 8qa5:A, 8qa5:B
7	5ume:E	292	277	0.3608	0.3596	0.3791	3.20e-58	5ume:A, 5ume:B, 5ume:C, 5ume:D, 5ume:F
8	6pey:B	290	277	0.3505	0.3517	0.3682	1.83e-57	1b5t:A, 1b5t:B, 1b5t:C, 2fmn:A, 2fmn:B, 2fmn:C, 2fmo:A, 2fmo:B, 2fmo:C, 3fst:A, 3fst:C, 3fst:E, 3fsu:A, 3fsu:C, 3fsu:E, 6pey:A, 6pey:C, 1zp3:A, 1zp3:B, 1zp3:C, 1zp4:A, 1zp4:B, 1zp4:C, 1zpt:A, 1zpt:B, 1zpt:C, 1zrq:A, 1zrq:B, 1zrq:C
9	7rml:A	281	277	0.3608	0.3737	0.3791	6.28e-54	7rml:B, 7rml:C
10	7xg9:A	286	202	0.1787	0.1818	0.2574	1.05e-07	7xg9:B, 7xlf:A, 7xlf:B
11	1kjv:A	276	37	0.0584	0.0616	0.4595	0.14
12	7lfj:A	276	37	0.0550	0.0580	0.4324	0.34	7lfi:A, 7lfi:D, 7lfj:D, 7lfk:A, 7lfk:D, 7lfl:A, 7lfm:A, 7lfm:D, 1mhc:A, 1mhc:D
13	1kjm:A	277	36	0.0550	0.0578	0.4444	0.77	1ed3:A, 1ed3:D, 6nf7:A, 6nf7:D, 6nf7:G, 6nf7:J, 6nf7:M
14	7n7i:A	279	73	0.0825	0.0860	0.3288	0.92	7n7i:B, 7n7i:C
15	4jin:A	254	101	0.0893	0.1024	0.2574	0.98	3re4:A, 3re4:B, 1zp9:A, 1zp9:B, 1zp9:C, 1zp9:D, 1ztf:A, 1zth:A, 1zth:B, 1zth:C, 1zth:D
16	3zx4:B	254	112	0.1237	0.1417	0.3214	1.2	3zu6:B, 3zup:A, 3zup:B, 3zw7:A, 3zw7:B, 3zwd:A, 3zwd:B, 3zwk:A, 3zwk:B, 3zx4:A, 3zx5:A, 3zx5:B
17	6cpd:B	127	50	0.0550	0.1260	0.3200	1.6	6cpd:A
18	2d3t:C	390	60	0.0790	0.0590	0.3833	1.7	2d3t:D, 1wdk:C, 1wdk:D, 1wdl:C, 1wdl:D, 1wdm:C, 1wdm:D
19	7jil:j	159	62	0.0687	0.1258	0.3226	3.3
20	3ivt:B	400	52	0.0412	0.0300	0.2308	5.4	3ivs:A, 3ivs:B, 3ivt:A, 3ivu:A, 3ivu:B, 3mi3:A, 3mi3:B
21	3rit:A	354	45	0.0687	0.0565	0.4444	5.5	3rit:B, 3rit:C, 3rit:D, 3rit:E, 3ro6:B, 3ro6:A, 3ro6:C, 3ro6:D, 3ro6:E, 3ro6:F
22	1me7:A	365	101	0.0893	0.0712	0.2574	5.6	1lrt:D, 1me8:A, 1me9:A, 1meh:A, 1mei:A, 1mew:A, 1pvn:A, 1pvn:B, 1pvn:C, 1pvn:D
23	7kh2:D	415	58	0.0619	0.0434	0.3103	7.9	7kh2:A, 7kh2:B, 7kh2:C
24	1lrt:A	338	101	0.0859	0.0740	0.2475	9.6	1lrt:B, 1lrt:C

[Back]