Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM DMFold SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
>protein
MIVPVRCFTCGKVLADKYYEFKKRVEAGEDPGKVLDDLGVERYCCRRTLLSHVELIDQVMVYK

The query sequence (length=63) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 9bct:N 65 63 1.0000 0.9692 1.0000 1.41e-41 9bcu:N, 6kf4:N, 4qiw:N, 4qiw:V
2 8cro:N 65 63 0.8413 0.8154 0.8413 3.11e-35 8oki:N, 8orq:N, 8p2i:N, 8rbo:N
3 4ayb:N 65 62 0.6349 0.6154 0.6452 1.36e-28 3hkz:N, 3hkz:W, 2pmz:N, 2pmz:Y, 4v8s:AO, 4v8s:BN, 2waq:N, 2wb1:N, 2wb1:O, 2y0s:N, 2y0s:O
4 7ok0:N 66 62 0.6190 0.5909 0.6290 6.38e-26 7oq4:N
5 7aoc:J 68 63 0.4603 0.4265 0.4603 6.95e-20 7aod:J, 7aod:V, 3h0g:J, 3h0g:V
6 1ef4:A 55 53 0.4921 0.5636 0.5849 7.98e-20
7 7xn7:J 67 63 0.4921 0.4627 0.4921 1.09e-19 6a5l:J, 6a5o:J, 6a5p:J, 6a5r:J, 6a5t:J, 6a5u:J, 8h0v:J, 8h0w:J, 8he5:J, 6inq:J, 6ir9:J, 6j4w:J, 6j4x:J, 6j4y:J, 6j4z:J, 6j50:J, 6j51:J, 8jh2:J, 8jh3:J, 8jh4:J, 7wbv:J, 7wbw:J, 7wbx:J, 5x4z:J, 5x4z:V, 5x50:J, 5x51:J, 5x51:V, 5xog:J, 5xon:J, 7xse:J, 7xsx:J, 7xsz:J, 7xt7:J, 7xtd:J, 7xti:J, 8yfq:J, 8yfr:J
8 7b0y:J 67 62 0.4921 0.4627 0.5000 1.17e-19 8a3y:J, 7a6h:J, 7ae1:J, 7ae3:J, 7aea:J, 8b3d:J, 8b3f:J, 8bvw:J, 8byq:J, 8bz1:J, 7d58:J, 7d59:J, 7dn3:J, 6drd:J, 7du2:J, 7edx:x, 7eg7:x, 7eg8:x, 7eg9:x, 7ega:x, 7egb:x, 7egc:x, 7ena:PJ, 7enc:PJ, 6exv:J, 7f4g:J, 7fji:J, 7fjj:J, 5flm:J, 6gmh:J, 6gml:J, 8gxq:PJ, 8gxs:PJ, 8ity:J, 8iue:J, 8iuh:J, 5iy6:J, 5iy8:J, 5iy9:J, 5iya:J, 5iyb:J, 5iyc:J, 5iyd:J, 7lbm:J, 7nvr:J, 7nvs:J, 7nvt:J, 7nvu:J, 7nvy:J, 7nvz:J, 7nw0:J, 6o9l:J, 7ob9:J, 7oba:J, 7obb:J, 8oeu:J, 8oev:J, 8oew:J, 8of0:J, 5oik:J, 7okx:J, 7oky:J, 7ol0:J, 7oo3:J, 7oob:J, 7oop:J, 7opc:J, 7opd:J, 7ozn:J, 7ozn:V, 7ozo:J, 7ozo:V, 7ozp:J, 7ozp:V, 8p4a:J, 8p4b:J, 8p4e:J, 8p4f:J, 7pks:J, 8rbx:J, 8s51:J, 8s52:J, 8s54:J, 8s55:J, 8s5n:J, 6ted:J, 8uha:J, 8uhd:J, 8uhg:J, 8ui0:J, 8uis:J, 7unc:J, 7und:J, 7vba:J, 7vbb:J, 7vbc:J, 8wak:x, 8wal:x, 8wan:x, 8wao:x, 8wap:x, 8waq:x, 8war:x, 8was:x, 8wat:x, 8wau:x, 8wav:x, 8waw:x, 8wax:x, 8way:x, 8waz:x, 8wb0:x, 7ycx:8, 7zwd:J, 7zx7:J, 7zx8:J
9 8hil:J 64 63 0.4762 0.4688 0.4762 4.94e-19 7eu0:J, 7eu1:J, 8him:J, 8hyj:J, 8xmc:J
10 5vvr:J 70 64 0.5079 0.4571 0.5000 3.04e-18 4a3b:J, 4a3c:J, 4a3d:J, 4a3e:J, 4a3f:J, 4a3g:J, 4a3i:J, 4a3j:J, 4a3k:J, 4a3l:J, 4a3m:J, 4a93:J, 2b63:J, 2b8k:J, 4bbr:J, 4bbs:J, 6blo:J, 6blp:J, 6bm2:J, 6bm4:J, 6bqf:J, 8bws:J, 4bxx:J, 4bxz:J, 4by1:J, 4by7:J, 4c2m:J, 4c2m:Y, 4c3h:J, 4c3i:J, 4c3j:J, 5c3e:J, 5c4a:J, 5c4j:J, 5c4x:J, 8cen:J, 8ceo:J, 6cnb:J, 6cnc:J, 6cnd:J, 6cnf:J, 3cqz:J, 2e2h:J, 2e2i:J, 2e2j:J, 6eu0:J, 6eu1:J, 6eu3:J, 6f40:J, 6f41:J, 6f42:J, 5fj8:J, 5fj9:J, 5fja:J, 3fki:J, 5fmf:J, 5fyw:J, 5fz5:J, 5g5l:J, 3gtg:J, 3gtj:J, 3gtk:J, 3gtl:J, 3gtm:J, 3gto:J, 3gtp:J, 3gtq:J, 6gyk:J, 6gyl:J, 6gym:J, 3h3v:K, 6h67:J, 6h68:J, 6hko:J, 6hls:J, 3hou:J, 3hou:V, 3hov:J, 3how:J, 3hox:J, 3hoy:J, 3hoz:J, 1i3q:J, 3i4m:J, 3i4n:J, 1i50:J, 1i6h:J, 6i84:J, 5ip7:J, 5ip9:J, 3j0k:J, 2ja5:J, 2ja6:J, 2ja7:J, 2ja7:V, 2ja8:J, 9ja1:J, 8jch:J, 3k1f:J, 8k5p:J, 3k7a:J, 1k83:J, 7ked:J, 7kee:J, 7kef:J, 5lmx:J, 3m3y:J, 5m3f:J, 5m3m:J, 3m4o:J, 5m5w:J, 5m5x:J, 5m5y:J, 5m64:J, 7mei:j, 7mei:J, 7mk9:J, 7mka:j, 7ml0:J, 7ml1:J, 7ml2:J, 7ml4:J, 5n5y:J, 5n5z:J, 5n60:J, 5n61:J, 1nik:J, 7nkx:J, 2nvq:J, 2nvt:J, 2nvx:J, 2nvy:J, 2nvz:J, 7o4i:J, 7o4j:J, 6o6c:H, 7o72:J, 7o73:J, 7o75:J, 5oa1:J, 5oqj:J, 5oqm:J, 5ot2:J, 3po2:J, 3po3:J, 3qt1:J, 1r5u:J, 2r7z:J, 1r9s:J, 1r9t:J, 2r92:J, 2r93:J, 7rim:J, 7rip:J, 7riq:J, 7riw:J, 7rix:J, 7riy:J, 6rqt:J, 6ruo:J, 6rwe:J, 3rzd:J, 3rzo:J, 3s14:J, 3s15:J, 3s16:J, 3s17:J, 3s1m:J, 3s1n:J, 3s1q:J, 3s1r:J, 3s2d:J, 3s2h:J, 1sfo:J, 5sva:J, 6tps:J, 6tut:J, 8tug:J, 8tvp:J, 8tvq:J, 8tvs:J, 8tvv:J, 8tvw:J, 8tvx:J, 1twa:J, 1twc:J, 1twf:J, 1twg:J, 1twh:J, 5u5q:J, 8u9r:J, 8u9x:J, 8ukq:J, 8ukr:J, 8uks:J, 8ukt:J, 8uku:J, 6upx:J, 6upy:J, 6upz:J, 6uq0:J, 6uq1:J, 6uq2:J, 6uq3:J, 4v1m:J, 4v1n:J, 4v1o:J, 2vum:J, 5vvs:J, 5w4u:J, 5w51:J, 5w5y:J, 5w64:J, 5w65:J, 5w66:J, 1wcm:J, 4x67:J, 4x6a:J, 1y1v:J, 1y1w:J, 4y52:J, 1y77:J, 4y7n:J, 4ym7:AJ, 4ym7:BJ, 4ym7:CJ, 4ym7:DJ, 4ym7:EJ, 4ym7:FJ, 2yu9:J, 7z0h:J, 7z1l:J, 7z1m:J, 7z1n:J, 7z1o:J, 7z2z:J, 7z30:J, 7z31:J, 7zs9:J, 7zsa:J, 7zsb:J
11 2emy:A 46 29 0.1905 0.2609 0.4138 0.72 2el5:A
12 2ep3:A 46 29 0.1746 0.2391 0.3793 0.73
13 2yrj:A 46 29 0.1905 0.2609 0.4138 1.3
14 4uhf:A 278 29 0.1429 0.0324 0.3103 1.7 4uhd:A, 4uhe:A
15 7amv:J 61 48 0.2540 0.2623 0.3333 2.0 7aoh:J, 8p0j:J, 8p0k:J, 8p0n:J, 6ric:J, 6rid:J, 6rie:J
16 4iv6:B 383 37 0.2063 0.0339 0.3514 2.1 4iv6:A
17 8q3b:J 80 75 0.2857 0.2250 0.2400 2.5 8q3k:J
18 1qyp:A 57 34 0.1429 0.1579 0.2647 3.1
19 5j9q:E 293 33 0.2063 0.0444 0.3939 3.9 1fy7:A, 5j9q:I, 5j9q:A, 5j9w:E, 5j9w:I, 1mj9:A, 1mja:A, 1mjb:A, 3to6:A, 3to7:A, 3to9:A, 7vvu:P, 7vvz:P
20 1aor:A 605 32 0.1429 0.0149 0.2812 6.4 1aor:B
21 6tz6:A 361 30 0.1905 0.0332 0.4000 7.8 6tz6:D
22 3h0g:M 1476 50 0.2381 0.0102 0.3000 8.0
23 4v9f:I 145 23 0.1429 0.0621 0.3913 8.1 3cc2:I, 3cc4:I, 3cc7:I, 3cce:I, 3ccj:I, 3ccl:I, 3ccm:I, 3ccq:I, 3ccr:I, 3ccs:I, 3ccu:I, 3ccv:I, 3cd6:I, 3cma:I, 3cme:I, 3g4s:I, 3g6e:I, 3g71:I, 3i55:I, 3i56:I, 2otj:I, 2otl:I, 2qa4:I, 2qex:I, 1s72:I, 1vq4:I, 1vq5:I, 1vq6:I, 1vq7:I, 1vq8:I, 1vq9:I, 1vqk:I, 1vql:I, 1vqm:I, 1vqn:I, 1vqo:I, 1vqp:I, 1yhq:I, 1yi2:I, 1yij:I, 1yit:I, 1yj9:I, 1yjn:I, 1yjw:I
24 4z3w:C 653 29 0.1905 0.0184 0.4138 8.8 4z3w:A, 4z3w:B, 4z3w:D, 4z3x:A, 4z3x:B, 4z3x:C, 4z3x:D, 4z3y:A, 4z3y:B, 4z3y:C, 4z3y:D, 4z3z:A, 4z3z:B, 4z3z:C, 4z3z:D, 4z40:A, 4z40:B, 4z40:C, 4z40:D
25 8blw:B 626 25 0.1587 0.0160 0.4000 9.4 8ptd:A, 8ptf:A
26 3ecc:A 182 26 0.1905 0.0659 0.4615 9.8 3ec2:A

[Back]

Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218