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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
>protein
MIIPIRCFSCGKVIGDKWDTYLTLLQEDNTEGEALDKLGLQRYCCRRMILTHVDLIEKLLCYNP

The query sequence (length=64) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 7aoc:J 68 64 1.0000 0.9412 1.0000 1.55e-43 7aod:J, 7aod:V, 3h0g:J, 3h0g:V
2 7xn7:J 67 64 0.7656 0.7313 0.7656 9.05e-34 6a5l:J, 6a5o:J, 6a5p:J, 6a5r:J, 6a5t:J, 6a5u:J, 8h0v:J, 8h0w:J, 8he5:J, 6inq:J, 6ir9:J, 6j4w:J, 6j4x:J, 6j4y:J, 6j4z:J, 6j50:J, 6j51:J, 8jh2:J, 8jh3:J, 8jh4:J, 7wbv:J, 7wbw:J, 7wbx:J, 5x4z:J, 5x4z:V, 5x50:J, 5x51:J, 5x51:V, 5xog:J, 5xon:J, 7xse:J, 7xsx:J, 7xsz:J, 7xt7:J, 7xtd:J, 7xti:J, 8yfq:J, 8yfr:J
3 8hil:J 64 63 0.7812 0.7812 0.7937 1.17e-33 7eu0:J, 7eu1:J, 8him:J, 8hyj:J, 8xmc:J
4 5vvr:J 70 65 0.7812 0.7143 0.7692 3.07e-33 4a3b:J, 4a3c:J, 4a3d:J, 4a3e:J, 4a3f:J, 4a3g:J, 4a3i:J, 4a3j:J, 4a3k:J, 4a3l:J, 4a3m:J, 4a93:J, 2b63:J, 2b8k:J, 4bbr:J, 4bbs:J, 6blo:J, 6blp:J, 6bm2:J, 6bm4:J, 6bqf:J, 8bws:J, 4bxx:J, 4bxz:J, 4by1:J, 4by7:J, 4c2m:J, 4c2m:Y, 4c3h:J, 4c3i:J, 4c3j:J, 5c3e:J, 5c4a:J, 5c4j:J, 5c4x:J, 8cen:J, 8ceo:J, 6cnb:J, 6cnc:J, 6cnd:J, 6cnf:J, 3cqz:J, 2e2h:J, 2e2i:J, 2e2j:J, 6eu0:J, 6eu1:J, 6eu3:J, 6f40:J, 6f41:J, 6f42:J, 5fj8:J, 5fj9:J, 5fja:J, 3fki:J, 5fmf:J, 5fyw:J, 5fz5:J, 5g5l:J, 3gtg:J, 3gtj:J, 3gtk:J, 3gtl:J, 3gtm:J, 3gto:J, 3gtp:J, 3gtq:J, 6gyk:J, 6gyl:J, 6gym:J, 3h3v:K, 6h67:J, 6h68:J, 6hko:J, 6hls:J, 3hou:J, 3hou:V, 3hov:J, 3how:J, 3hox:J, 3hoy:J, 3hoz:J, 1i3q:J, 3i4m:J, 3i4n:J, 1i50:J, 1i6h:J, 6i84:J, 5ip7:J, 5ip9:J, 3j0k:J, 2ja5:J, 2ja6:J, 2ja7:J, 2ja7:V, 2ja8:J, 9ja1:J, 8jch:J, 3k1f:J, 8k5p:J, 3k7a:J, 1k83:J, 7ked:J, 7kee:J, 7kef:J, 5lmx:J, 3m3y:J, 5m3f:J, 5m3m:J, 3m4o:J, 5m5w:J, 5m5x:J, 5m5y:J, 5m64:J, 7mei:j, 7mei:J, 7mk9:J, 7mka:j, 7ml0:J, 7ml1:J, 7ml2:J, 7ml4:J, 5n5y:J, 5n5z:J, 5n60:J, 5n61:J, 1nik:J, 7nkx:J, 2nvq:J, 2nvt:J, 2nvx:J, 2nvy:J, 2nvz:J, 7o4i:J, 7o4j:J, 6o6c:H, 7o72:J, 7o73:J, 7o75:J, 5oa1:J, 5oqj:J, 5oqm:J, 5ot2:J, 3po2:J, 3po3:J, 3qt1:J, 1r5u:J, 2r7z:J, 1r9s:J, 1r9t:J, 2r92:J, 2r93:J, 7rim:J, 7rip:J, 7riq:J, 7riw:J, 7rix:J, 7riy:J, 6rqt:J, 6ruo:J, 6rwe:J, 3rzd:J, 3rzo:J, 3s14:J, 3s15:J, 3s16:J, 3s17:J, 3s1m:J, 3s1n:J, 3s1q:J, 3s1r:J, 3s2d:J, 3s2h:J, 1sfo:J, 5sva:J, 6tps:J, 6tut:J, 8tug:J, 8tvp:J, 8tvq:J, 8tvs:J, 8tvv:J, 8tvw:J, 8tvx:J, 1twa:J, 1twc:J, 1twf:J, 1twg:J, 1twh:J, 5u5q:J, 8u9r:J, 8u9x:J, 8ukq:J, 8ukr:J, 8uks:J, 8ukt:J, 8uku:J, 6upx:J, 6upy:J, 6upz:J, 6uq0:J, 6uq1:J, 6uq2:J, 6uq3:J, 4v1m:J, 4v1n:J, 4v1o:J, 2vum:J, 5vvs:J, 5w4u:J, 5w51:J, 5w5y:J, 5w64:J, 5w65:J, 5w66:J, 1wcm:J, 4x67:J, 4x6a:J, 1y1v:J, 1y1w:J, 4y52:J, 1y77:J, 4y7n:J, 4ym7:AJ, 4ym7:BJ, 4ym7:CJ, 4ym7:DJ, 4ym7:EJ, 4ym7:FJ, 2yu9:J, 7z0h:J, 7z1l:J, 7z1m:J, 7z1n:J, 7z1o:J, 7z2z:J, 7z30:J, 7z31:J, 7zs9:J, 7zsa:J, 7zsb:J
5 7b0y:J 67 64 0.7188 0.6866 0.7188 3.21e-32 8a3y:J, 7a6h:J, 7ae1:J, 7ae3:J, 7aea:J, 8b3d:J, 8b3f:J, 8bvw:J, 8byq:J, 8bz1:J, 7d58:J, 7d59:J, 7dn3:J, 6drd:J, 7du2:J, 7edx:x, 7eg7:x, 7eg8:x, 7eg9:x, 7ega:x, 7egb:x, 7egc:x, 7ena:PJ, 7enc:PJ, 6exv:J, 7f4g:J, 7fji:J, 7fjj:J, 5flm:J, 6gmh:J, 6gml:J, 8gxq:PJ, 8gxs:PJ, 8ity:J, 8iue:J, 8iuh:J, 5iy6:J, 5iy8:J, 5iy9:J, 5iya:J, 5iyb:J, 5iyc:J, 5iyd:J, 7lbm:J, 7nvr:J, 7nvs:J, 7nvt:J, 7nvu:J, 7nvy:J, 7nvz:J, 7nw0:J, 6o9l:J, 7ob9:J, 7oba:J, 7obb:J, 8oeu:J, 8oev:J, 8oew:J, 8of0:J, 5oik:J, 7okx:J, 7oky:J, 7ol0:J, 7oo3:J, 7oob:J, 7oop:J, 7opc:J, 7opd:J, 7ozn:J, 7ozn:V, 7ozo:J, 7ozo:V, 7ozp:J, 7ozp:V, 8p4a:J, 8p4b:J, 8p4e:J, 8p4f:J, 7pks:J, 8rbx:J, 8s51:J, 8s52:J, 8s54:J, 8s55:J, 8s5n:J, 6ted:J, 8uha:J, 8uhd:J, 8uhg:J, 8ui0:J, 8uis:J, 7unc:J, 7und:J, 7vba:J, 7vbb:J, 7vbc:J, 8wak:x, 8wal:x, 8wan:x, 8wao:x, 8wap:x, 8waq:x, 8war:x, 8was:x, 8wat:x, 8wau:x, 8wav:x, 8waw:x, 8wax:x, 8way:x, 8waz:x, 8wb0:x, 7ycx:8, 7zwd:J, 7zx7:J, 7zx8:J
6 4ayb:N 65 63 0.4844 0.4769 0.4921 3.07e-22 3hkz:N, 3hkz:W, 2pmz:N, 2pmz:Y, 4v8s:AO, 4v8s:BN, 2waq:N, 2wb1:N, 2wb1:O, 2y0s:N, 2y0s:O
7 8cro:N 65 63 0.5000 0.4923 0.5079 2.76e-20 8oki:N, 8orq:N, 8p2i:N, 8rbo:N
8 9bct:N 65 63 0.4531 0.4462 0.4603 8.26e-20 9bcu:N, 6kf4:N, 4qiw:N, 4qiw:V
9 7ok0:N 66 63 0.4531 0.4394 0.4603 4.69e-19 7oq4:N
10 1ef4:A 55 53 0.3594 0.4182 0.4340 3.41e-13
11 8q3b:J 80 31 0.2031 0.1625 0.4194 0.20 8q3k:J
12 3zuk:A 657 53 0.2344 0.0228 0.2830 0.61 3zuk:B
13 7cte:D 406 62 0.2812 0.0443 0.2903 0.92 7ctf:D, 7ctg:D, 7jpo:D, 7jpp:D, 7jpq:D, 7jpr:D, 7jps:D, 5uj7:C, 5uj7:D, 5ujm:D
14 7w5c:A 355 57 0.2812 0.0507 0.3158 1.2
15 2i13:A 151 27 0.1875 0.0795 0.4444 4.6
16 7m98:A 133 61 0.2656 0.1278 0.2787 4.9 5a5n:A, 5a5o:A, 5a5p:A, 5a5q:A, 5a5r:A, 5a81:A, 5a82:A, 5a83:A, 5epb:A, 6epj:A, 6epr:A, 6eps:A, 6ept:A, 6epu:A, 6epv:A, 6epw:A, 6epx:A, 5f36:A, 5f3a:A, 6hdn:A, 6hdo:A, 6hi4:A, 6hi5:A, 6hi6:A, 6hi7:A, 6hi8:A, 6hia:A, 6hib:A, 6hic:A, 6hid:A, 6hie:A, 5lj0:A, 7ppx:AAA, 7px5:AAA, 7q6t:A, 7q6u:A, 7q6v:A, 7q6w:A, 4qsp:A, 4qss:A, 4qst:A, 4qsu:A, 4qsw:A, 4qsx:A, 4qut:A, 4quu:A, 7qu7:AAA, 7quk:AAA, 7qum:AAA, 5qxi:A, 5qxj:A, 5qxk:A, 5qxl:A, 5qxm:A, 5qxn:A, 5qxo:A, 5qxp:A, 5qxq:A, 5qxr:A, 5qxs:A, 5qxt:A, 5qxu:A, 5qxv:A, 5qxw:A, 5qxx:A, 5qxy:A, 5qxz:A, 7qx1:AAA, 7qxt:AAA, 5qy0:A, 7qyk:AAA, 7qyl:AAA, 7qzm:AAA, 7qzy:AAA, 7qzz:AAA, 7r00:AAA, 7r05:AAA, 7r0y:AAA, 5r4e:A, 5r4v:A, 5r4w:A, 5r4y:A, 5r4z:A, 6s55:A, 6s56:A, 6s57:A, 8sdo:A, 8sdq:A, 4tt2:A, 4tt4:A, 4tt4:B, 4tte:A, 4tu4:A, 4tyl:A, 4tz2:A, 4tz8:A, 6yb4:AAA, 7z9h:AAA, 7z9i:AAA, 7z9j:AAA, 7z9n:AAA, 7z9o:AAA, 7z9s:AAA, 7z9u:AAA
17 2i13:B 144 27 0.1875 0.0833 0.4444 5.0
18 8any:AH 140 31 0.1562 0.0714 0.3226 6.2 7a5f:H6, 7a5g:H6, 7a5i:H6, 7a5k:H6, 5aj3:J, 5aj4:AJ, 8csp:H, 8cst:H, 6gaw:AJ, 6gaz:AJ, 3j9m:AH, 3jd5:J, 8k2a:SJ, 7l08:AH, 6neq:J, 6nf8:J, 7nqh:AJ, 7nql:AJ, 7nsi:AJ, 7nsj:AJ, 6nu2:AH, 6nu3:AH, 7og4:AH, 8oin:AH, 8oip:AH, 8oir:AH, 8ois:AH, 7p2e:H, 7pnx:H, 7pny:H, 7pnz:H, 7po0:H, 7po1:H, 7po2:H, 7po3:H, 7qi4:AH, 7qi5:AH, 7qi6:AH, 8qrk:H, 8qrl:H, 8qrm:H, 8qrn:H, 6rw4:H, 6rw5:H, 6vlz:AH, 6vmi:AH, 8xt0:SJ, 8xt2:SJ, 6ydp:AJ, 6ydw:AJ, 6zm5:AH, 6zm6:AH, 6zs9:AH, 6zsa:AH, 6zsb:AH, 6zsc:AH, 6zsd:AH, 6zse:AH, 6zsg:AH
19 5xgd:A 548 32 0.2031 0.0237 0.4062 6.3 8pps:A, 8pps:B, 5xge:A
20 3waj:A 793 27 0.1562 0.0126 0.3704 7.0
21 7e9s:A 867 27 0.1562 0.0115 0.3704 7.0 5gmy:A, 3wak:A
22 4en4:A 310 16 0.1250 0.0258 0.5000 7.6 2ajp:A, 2ajp:B, 4en4:B, 4eoh:A, 4eoh:B, 3fhx:A, 3fhx:B, 3fhy:A, 3fhy:B, 3keu:A, 3keu:B, 8wr2:A, 8wr2:B, 2yxt:A, 2yxt:B, 2yxu:A, 2yxu:B
23 6r1x:C 84 28 0.1406 0.1071 0.3214 8.9 5ami:C, 6r13:C
24 1gth:A 1019 49 0.2344 0.0147 0.3061 9.7 8f5w:A, 8f5w:B, 8f5w:C, 8f5w:D, 8f61:A, 8f61:B, 8f61:C, 8f61:D, 8f6n:A, 8f6n:B, 8f6n:C, 8f6n:D, 1gt8:A, 1gt8:B, 1gt8:C, 1gt8:D, 1gte:A, 1gte:B, 1gte:C, 1gte:D, 1gth:B, 1gth:C, 1gth:D, 1h7w:A, 1h7w:B, 1h7w:C, 1h7w:D, 1h7x:A, 1h7x:B, 1h7x:C, 1h7x:D, 7ljs:A, 7ljs:B, 7ljs:C, 7ljs:D, 7ljt:A, 7ljt:B, 7ljt:C, 7ljt:D, 7lju:A, 7lju:C, 7lju:D, 7lju:B, 7m31:A, 7m31:B, 7m31:C, 7m31:D, 7m32:A, 7m32:B, 7m32:C, 7m32:D

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417