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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
MFTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNMQAKAEFYSEVLTIVVDGKEIKVKAQDVQRH
PYKPKLQHIDFVRA

The query sequence (length=94) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 8a3l:u 94 94 1.0000 1.0000 1.0000 3.12e-66 7abz:V, 7ac7:V, 7acj:V, 7acr:V, 5ady:V, 5afi:V, 5aka:V, 8akn:u, 8am9:u, 8ana:u, 8ap4:u, 9ax7:u, 9ax8:V, 8aye:u, 8b0x:u, 7b5k:V, 8b7y:d, 3bbx:V, 8bf7:S, 8bge:S, 8bgh:S, 8bh4:S, 8bhj:S, 8bhl:S, 8bhn:S, 8bhp:S, 8bil:S, 8bim:S, 7bl2:V, 7bl3:V, 7bl4:V, 7bl5:V, 7bl6:V, 6bu8:24, 7bv8:W, 6by1:CV, 6by1:DV, 6c4i:W, 8c8x:V, 8c8y:V, 8c8z:V, 8c90:V, 8c94:V, 8c95:V, 8ceu:u, 8cgd:u, 8cgk:u, 8cgv:u, 9cg5:u, 9cg6:u, 9cg7:u, 7cpj:V, 4csu:W, 1d6k:A, 7d6z:V, 7d80:t, 1dfu:P, 6dnc:Z, 8eiu:u, 8ekc:X, 8emm:u, 6enf:V, 6enj:V, 6enu:V, 9fbv:u, 8fiz:DC, 8fto:u, 8fzd:X, 8fze:X, 8fzf:X, 8fzg:X, 8fzh:X, 8fzi:X, 8fzj:X, 8g2u:V, 8g31:V, 8g34:V, 8g38:V, 8g6w:u, 8g6x:u, 8g6y:u, 8g7p:X, 8g7q:X, 8g7r:X, 8g7s:X, 5gad:W, 5gae:W, 5gaf:W, 5gag:W, 5gah:W, 6gbz:V, 6gc0:V, 6gc4:V, 6gc8:V, 6gwt:V, 6gxm:V, 6gxn:V, 6gxo:V, 6gxp:V, 6h4n:V, 5h5u:W, 6h58:V, 6h58:VV, 6hrm:V, 8hsp:u, 8htz:u, 8hu1:u, 6i0y:8, 6i7v:DW, 6i7v:CW, 8ifb:u, 8ifc:u, 5iqr:V, 5it8:CW, 5it8:DW, 8j1z:u, 2j28:V, 3j5l:V, 5j5b:CW, 5j5b:DW, 3j7z:V, 5j7l:CW, 5j7l:DW, 3j8g:W, 5j88:CW, 5j88:DW, 5j8a:CW, 5j8a:DW, 3j9y:V, 3j9z:LT, 5j91:CW, 5j91:DW, 3ja1:LX, 3jbu:w, 3jbv:w, 3jcd:V, 3jce:V, 3jcj:U, 3jcn:V, 5jc9:CW, 5jc9:DW, 7jss:v, 7jsw:v, 7jsz:v, 5jte:BV, 7jt1:v, 7jt2:v, 7jt3:v, 5ju8:BV, 7k00:u, 7k50:v, 7k51:v, 7k52:v, 7k53:v, 7k54:v, 7k55:v, 5kcr:1Z, 5kcs:1Z, 5kps:V, 5kpv:U, 5kpw:U, 5kpx:U, 5l3p:Z, 6lkq:d, 7lv0:v, 7lvk:d, 5lza:V, 5lzb:V, 5lzc:V, 5lzd:V, 5lze:V, 5lzf:V, 7m5d:V, 5mdv:V, 5mdw:V, 5mdy:V, 5mdz:V, 5mgp:V, 7n1p:LY, 7n2c:LY, 7n2u:LY, 7n2v:LY, 7n30:LY, 7n31:LY, 7nbu:u, 5nco:W, 5np6:t, 7nso:V, 7nsp:V, 7nsq:V, 5nwy:i, 7nwt:V, 7nww:U, 7o19:BV, 7o1a:BV, 7o1c:BV, 5o2r:V, 6o9j:V, 6o9k:V, 6ofx:v, 6og7:v, 6ogf:v, 6ogg:v, 6ogi:v, 7oif:U, 7oig:U, 7oii:U, 7oiz:u, 7oj0:u, 6om6:V, 6ore:V, 6orl:V, 6osk:V, 6osq:V, 6ost:V, 6ot3:V, 7ot5:U, 7otc:V, 6ouo:V, 8p16:V, 8p17:V, 8p18:V, 7p3k:u, 8peg:y, 8phj:u, 6pj6:d, 7pjs:V, 7pjt:V, 7pju:V, 7pjv:V, 7pjw:V, 7pjx:V, 7pjy:V, 7pjz:V, 8pkl:y, 8pva:u, 7q4k:BV, 8q4f:u, 6q97:V, 6q98:V, 6q9a:V, 8qbt:V, 6qdw:w, 7qg8:i, 7qgh:i, 7qgn:i, 7qgr:i, 8qk7:V, 8qoa:u, 7qq3:d, 6qul:W, 8r6c:u, 8r8m:u, 8rpy:V, 8rpz:V, 8rq0:V, 8rq2:V, 6s0k:W, 7s1g:d, 7s1h:d, 7s1i:d, 7s1j:d, 7s1k:d, 7sa4:V, 7ss9:v, 7ssd:v, 7ssl:v, 7ssn:v, 7sso:v, 7ssw:v, 7st2:v, 7st6:v, 7st7:v, 8syl:X, 6szs:V, 8t5d:V, 8t5h:V, 6tbv:L251, 6tc3:L251, 7tos:L25, 4u1u:BV, 4u1u:DV, 4u1v:BV, 4u1v:DV, 4u20:BV, 4u20:DV, 4u24:BV, 4u24:DV, 4u25:BV, 4u25:DV, 4u26:BV, 4u26:DV, 4u27:BV, 4u27:DV, 5u4i:W, 6u48:CW, 5u9f:24, 5u9g:24, 7ug7:LY, 7uph:u, 8upo:4, 8upr:4, 8uql:4, 8uqm:4, 8uqp:4, 8ur0:4, 8urh:4, 8uri:4, 8urx:4, 8ury:4, 4uy8:8, 5uyk:24, 5uyl:24, 5uym:24, 5uyn:24, 5uyp:24, 5uyq:24, 4v4h:BV, 4v4h:DV, 4v4q:BV, 4v4q:DV, 4v4v:BT, 4v4w:BT, 4v50:BV, 4v50:DV, 4v52:BV, 4v52:DV, 4v53:BV, 4v53:DV, 4v54:BV, 4v54:DV, 4v55:BV, 4v55:DV, 4v56:BV, 4v56:DV, 4v57:BV, 4v57:DV, 4v5b:AV, 4v5b:CV, 4v5h:BW, 4v5y:BV, 4v5y:DV, 4v64:BV, 4v64:DV, 4v65:BC, 4v66:BC, 4v69:BV, 4v6c:BV, 4v6c:DV, 4v6d:BV, 4v6d:DV, 4v6e:BV, 4v6e:DV, 4v6k:AW, 4v6l:BW, 4v6m:BV, 4v6n:AX, 4v6o:BX, 4v6p:BX, 4v6q:BX, 4v6r:BX, 4v6s:AX, 4v6t:BV, 4v6v:BZ, 4v6y:BV, 4v6z:BV, 4v70:BV, 4v71:BV, 4v72:BV, 4v73:BV, 4v74:BV, 4v75:BV, 4v76:BV, 4v77:BV, 4v78:BV, 4v79:BV, 4v7a:BV, 4v7b:BV, 4v7c:BX, 4v7d:AY, 4v7i:AV, 4v7s:BV, 4v7s:DV, 4v7t:BV, 4v7t:DV, 4v7u:BV, 4v7u:DV, 4v7v:BV, 4v7v:DV, 4v85:BZ, 4v89:BZ, 4v9c:BV, 4v9c:DV, 4v9d:CV, 4v9d:DV, 4v9o:AV, 4v9o:CV, 4v9o:EV, 4v9o:GV, 4v9p:AV, 4v9p:CV, 4v9p:EV, 4v9p:GV, 8vs9:L25, 8vsa:L25, 6vu3:4, 6vwl:T, 6vwm:T, 6vwn:T, 6vyq:4, 6vyr:4, 6vys:4, 6vyt:4, 6vyu:4, 6vyw:4, 6vyx:4, 6vyy:4, 6vyz:4, 6vz2:4, 6vz3:4, 6vz5:4, 6vz7:4, 6vzj:4, 8w51:W, 5wdt:V, 6wd0:v, 6wd1:v, 6wd2:v, 6wd3:v, 6wd4:v, 6wd5:v, 6wd6:v, 6wd7:v, 6wd8:v, 6wd9:v, 6wda:v, 6wdb:v, 6wdc:v, 6wdd:v, 6wde:v, 6wdf:v, 6wdg:v, 6wdh:v, 6wdi:v, 6wdj:v, 6wdk:v, 6wdl:v, 6wdm:v, 5we4:V, 5we6:V, 4wf1:BV, 4wf1:DV, 5wf0:V, 5wfk:V, 5wfs:V, 6wnt:v, 6wnv:v, 6wnw:v, 4woi:BV, 4woi:CV, 4www:RV, 4www:YV, 6x6t:4, 6x7f:4, 6x7k:4, 6x9q:4, 6xdq:4, 6xdr:4, 6xgf:4, 6xii:4, 6xij:4, 6xz7:V, 6xza:V2, 6xzb:V2, 6y69:V, 7y7c:u, 7y7d:u, 7y7e:u, 7y7f:u, 7y7g:u, 7y7h:u, 4ybb:CW, 4ybb:DW, 7yla:d, 6ys3:w, 6ysr:V, 6yss:V, 6yst:V, 6ysu:V, 7z20:w, 7zod:w, 7zp8:w, 7zq5:w, 7zq6:w, 6ztj:BW, 6ztl:BW, 6ztm:BW, 6ztn:BW, 6zto:BW, 6ztp:BW, 7zta:L251, 6zu1:BW
2 8cam:u 75 90 0.7872 0.9867 0.8222 4.09e-42
3 7m4v:U 97 95 0.4681 0.4536 0.4632 7.00e-20 7m4w:U, 7m4x:U, 7m4y:U, 7m4z:U, 7ryf:U, 7ryg:U, 7ryh:U, 7uvv:U, 7uvw:U, 7uvx:U, 7uvy:U, 7uvz:U, 7uw1:U, 6v39:U, 6v3a:U, 6v3b:U, 6v3d:U, 6yhs:R, 6ysi:R
4 8rd8:UC 97 94 0.4574 0.4433 0.4574 9.20e-20 8rdv:UC, 8rdw:UC
5 7unr:X 190 93 0.3830 0.1895 0.3871 2.45e-16 8cd1:V, 6spb:V, 6spd:V, 6spf:V, 6spg:V, 7unu:X, 7unv:X, 7unw:X
6 7f0d:V 177 86 0.3511 0.1864 0.3837 5.80e-11 7kgb:V, 7msc:V, 7msh:V, 7msm:V, 7msz:V, 7mt2:V, 7mt3:V, 7mt7:V, 7sfr:V, 5v7q:V, 5v93:V
7 9c4g:u 179 91 0.3298 0.1732 0.3407 1.37e-09 8crx:u, 8cvm:u
8 6dzi:W 192 92 0.3085 0.1510 0.3152 2.37e-08 6dzp:W, 8fr8:2, 8kab:W, 5o60:W, 5o61:W, 7s0s:X, 8v9j:X, 8v9k:X, 8v9l:X, 7xam:W, 5xym:V, 8xz3:W, 7y41:W, 5zeb:W, 5zep:W, 5zet:W
9 7jil:V 124 89 0.2979 0.2258 0.3146 4.20e-08
10 5nrg:S 174 81 0.2447 0.1322 0.2840 7.11e-05 7asm:T, 7asn:T, 7aso:a, 7asp:T, 6ddd:H, 6ddg:H, 6fxc:AT, 6fxc:BT, 5hkv:S, 5hl7:S, 6hma:T, 5li0:Y, 5nd8:Y, 5nd9:Y, 5ngm:AT, 7nhl:Y, 7nhm:Y, 8p2f:Y, 8p2g:Y, 8p2h:Y, 7p48:T, 6s0x:T, 6s0z:T, 6s12:T, 6s13:T, 5t7v:L8, 5tcu:L8, 7ttu:H, 7ttw:H, 4wce:S, 4wf9:S, 4wfa:S, 4wfb:S, 6wqn:H, 6wqq:H, 6wrs:H, 6wru:H, 8y36:T, 8y37:T, 8y38:T, 8y39:T, 6yef:Y
11 8fmw:AX 181 94 0.2766 0.1436 0.2766 0.002 8fn2:X
12 6o8w:W 94 76 0.2128 0.2128 0.2632 0.020 6o8x:W, 6o8y:W, 6o8z:W, 6o90:W
13 2d2m:A 140 58 0.2021 0.1357 0.3276 0.68 2d2n:A, 7e96:A, 7e97:A, 7e98:A, 7e99:A, 2zfo:A, 2zs0:A, 2zs1:A
14 6xyw:Av 198 29 0.1170 0.0556 0.3793 1.3
15 2ep7:B 339 22 0.1489 0.0413 0.6364 5.2 2ep7:A
16 6hjs:A 236 19 0.1064 0.0424 0.5263 6.4 6hjs:B
17 5kzt:B 510 82 0.2553 0.0471 0.2927 8.4 5kzt:A
18 1hdg:O 332 32 0.1596 0.0452 0.4688 9.7 1hdg:Q

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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