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BioLiP
>protein
MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASAKSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKL
MAELE

The query sequence (length=85) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 1j6t:B 85 85 1.0000 1.0000 1.0000 4.51e-57 1poh:A, 1vrc:C, 1vrc:D
2 8e72:B 598 52 0.1529 0.0217 0.2500 0.45 8dhw:A, 8dhw:B, 8e72:A
3 6jw7:A 342 22 0.1294 0.0322 0.5000 1.2 6jw6:A, 6jw6:B, 6jw7:B, 6jw8:A, 6jw8:B
4 1ug9:A 1019 74 0.2471 0.0206 0.2838 1.4 1ulv:A
5 4lya:A 521 74 0.2000 0.0326 0.2297 1.6 5fv0:A
6 7w18:A 212 27 0.1294 0.0519 0.4074 2.7 7w13:A
7 6j5y:A 233 45 0.1294 0.0472 0.2444 3.1
8 3acs:A 822 30 0.1412 0.0146 0.4000 3.7 3acs:B, 3act:A, 3act:B, 3afj:A, 3afj:B, 2cqs:A, 2cqs:B, 2cqt:A, 2cqt:B, 3qfy:A, 3qfy:B, 3qfz:A, 3qfz:B, 3qg0:A, 3qg0:B
9 2anr:A 155 27 0.1412 0.0774 0.4444 4.2 2ann:A
10 5fv0:B 458 74 0.2000 0.0371 0.2297 8.4
11 3s4a:A 822 30 0.1412 0.0146 0.4000 9.1 3s4a:B, 3s4b:A, 3s4b:B, 3s4d:A
12 4uor:A 418 64 0.2353 0.0478 0.3125 9.5 4uoo:A, 4uoo:B, 4uoo:C, 4uoo:D, 4uoo:E, 4uor:B, 4uor:C, 4uor:D, 4uor:E, 4uor:F, 4uor:G, 4uor:H, 4uor:I, 4uor:J, 4uor:K

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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