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BioLiP
>protein
LYFQGAMGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCE

The query sequence (length=47) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2w2m:E 49 47 1.0000 0.9592 1.0000 3.02e-30 2w2n:E, 2w2o:E, 2w2p:E, 2w2q:E
2 1n7d:A 639 40 0.8511 0.0626 1.0000 1.80e-22 1ajj:A, 3bps:E, 1d2j:A, 1f8z:A, 2fcw:B, 3gcw:E, 3gcx:E, 1hj7:A, 1hz8:A, 1i0u:A, 2kri:B, 2lgp:A, 3m0c:C, 3p5b:L, 3p5c:L, 1xfe:A
3 1n7d:A 639 37 0.2766 0.0203 0.3514 1.7 1ajj:A, 3bps:E, 1d2j:A, 1f8z:A, 2fcw:B, 3gcw:E, 3gcx:E, 1hj7:A, 1hz8:A, 1i0u:A, 2kri:B, 2lgp:A, 3m0c:C, 3p5b:L, 3p5c:L, 1xfe:A
4 5b4x:B 479 41 0.6170 0.0605 0.7073 6.02e-15 3a7q:B, 5b4x:D, 5b4y:B
5 3v64:C 338 39 0.3830 0.0533 0.4615 2.42e-08 3v64:D
6 6l6r:A 610 39 0.3617 0.0279 0.4359 3.15e-08 6l6r:B, 7nam:A, 3sob:B, 3soq:A, 3sov:A
7 6l6r:A 610 36 0.3617 0.0279 0.4722 4.23e-06 6l6r:B, 7nam:A, 3sob:B, 3soq:A, 3sov:A
8 8dvm:A 612 39 0.3617 0.0278 0.4359 2.06e-05 4a0p:A, 8dvl:A, 8dvn:A
9 8dvm:A 612 25 0.2553 0.0196 0.4800 0.089 4a0p:A, 8dvl:A, 8dvn:A
10 8em4:A 3818 45 0.4255 0.0052 0.4444 5.29e-05 8em4:B
11 8em4:A 3818 32 0.3191 0.0039 0.4688 0.001 8em4:B
12 8em4:A 3818 41 0.3617 0.0045 0.4146 0.008 8em4:B
13 8em4:A 3818 27 0.2979 0.0037 0.5185 0.021 8em4:B
14 8em4:A 3818 39 0.2979 0.0037 0.3590 0.028 8em4:B
15 8em4:A 3818 46 0.3191 0.0039 0.3261 0.22 8em4:B
16 8em4:A 3818 17 0.2128 0.0026 0.5882 0.61 8em4:B
17 8em4:A 3818 29 0.2553 0.0031 0.4138 1.9 8em4:B
18 8em7:A 4378 45 0.4255 0.0046 0.4444 5.67e-05 8em7:B, 8jut:A, 8jut:B, 8juu:B, 8juu:A, 8jx8:B, 8jx8:A, 8jx9:B, 8jxa:A, 8jxb:A, 8jxd:A, 8jxe:A, 8jxe:B, 8jxf:B, 8jxg:A, 8jxh:A, 8jxi:B
19 8em7:A 4378 36 0.3191 0.0034 0.4167 0.001 8em7:B, 8jut:A, 8jut:B, 8juu:B, 8juu:A, 8jx8:B, 8jx8:A, 8jx9:B, 8jxa:A, 8jxb:A, 8jxd:A, 8jxe:A, 8jxe:B, 8jxf:B, 8jxg:A, 8jxh:A, 8jxi:B
20 8em7:A 4378 41 0.3617 0.0039 0.4146 0.009 8em7:B, 8jut:A, 8jut:B, 8juu:B, 8juu:A, 8jx8:B, 8jx8:A, 8jx9:B, 8jxa:A, 8jxb:A, 8jxd:A, 8jxe:A, 8jxe:B, 8jxf:B, 8jxg:A, 8jxh:A, 8jxi:B
21 8em7:A 4378 27 0.2979 0.0032 0.5185 0.023 8em7:B, 8jut:A, 8jut:B, 8juu:B, 8juu:A, 8jx8:B, 8jx8:A, 8jx9:B, 8jxa:A, 8jxb:A, 8jxd:A, 8jxe:A, 8jxe:B, 8jxf:B, 8jxg:A, 8jxh:A, 8jxi:B
22 8em7:A 4378 39 0.2979 0.0032 0.3590 0.031 8em7:B, 8jut:A, 8jut:B, 8juu:B, 8juu:A, 8jx8:B, 8jx8:A, 8jx9:B, 8jxa:A, 8jxb:A, 8jxd:A, 8jxe:A, 8jxe:B, 8jxf:B, 8jxg:A, 8jxh:A, 8jxi:B
23 8em7:A 4378 46 0.3191 0.0034 0.3261 0.22 8em7:B, 8jut:A, 8jut:B, 8juu:B, 8juu:A, 8jx8:B, 8jx8:A, 8jx9:B, 8jxa:A, 8jxb:A, 8jxd:A, 8jxe:A, 8jxe:B, 8jxf:B, 8jxg:A, 8jxh:A, 8jxi:B
24 8em7:A 4378 19 0.2128 0.0023 0.5263 0.70 8em7:B, 8jut:A, 8jut:B, 8juu:B, 8juu:A, 8jx8:B, 8jx8:A, 8jx9:B, 8jxa:A, 8jxb:A, 8jxd:A, 8jxe:A, 8jxe:B, 8jxf:B, 8jxg:A, 8jxh:A, 8jxi:B
25 8em7:A 4378 29 0.2553 0.0027 0.4138 2.2 8em7:B, 8jut:A, 8jut:B, 8juu:B, 8juu:A, 8jx8:B, 8jx8:A, 8jx9:B, 8jxa:A, 8jxb:A, 8jxd:A, 8jxe:A, 8jxe:B, 8jxf:B, 8jxg:A, 8jxh:A, 8jxi:B
26 8jxc:A 1337 39 0.3617 0.0127 0.4359 0.019 2i1p:A, 8jxb:B, 8jxh:B, 8jxi:A
27 6f1c:D 276 36 0.3404 0.0580 0.4444 0.096 6f1c:B, 6f1h:D, 6f1h:B, 4lmf:A, 4lmf:B, 4lmf:C, 4lmf:D, 4lor:A, 1nzi:A, 1nzi:B
28 8jxj:A 570 46 0.3191 0.0263 0.3261 0.20 8jxj:B
29 8jxj:A 570 24 0.2340 0.0193 0.4583 2.1 8jxj:B
30 7weg:B 96 24 0.2128 0.1042 0.4167 0.61 7weg:A
31 6r2w:L 143 32 0.2553 0.0839 0.3750 0.84 2a2q:L, 2aei:L, 2aer:L, 2b8o:L, 2c4f:L, 8cn9:D, 8cn9:I, 8cn9:S, 1dan:L, 1dva:L, 1dva:M, 2ec9:L, 3ela:L, 1fak:L, 1ff7:A, 1ffm:A, 2fir:L, 4ibl:L, 1j9c:L, 5l0s:B, 5par:A, 2puq:L, 1qfk:L, 3th2:L, 3th3:L, 3th4:L, 1w0y:L, 1w2k:L, 1wqv:L, 1wss:L, 1wtg:L, 1wun:L, 1wv7:L, 4ylq:L, 1z6j:L, 4z6a:L, 4zma:L, 2zp0:L, 2zwl:L, 2zzu:L
32 5ckn:A 278 41 0.2979 0.0504 0.3415 1.4 5cis:A, 5ckm:A, 5ckn:D, 1nt0:A, 1nt0:G
33 4xbm:B 401 35 0.3191 0.0374 0.4286 1.7
34 1emn:A 82 39 0.2766 0.1585 0.3333 1.7 1emo:A
35 7ela:A 1402 15 0.1702 0.0057 0.5333 2.2
36 7ckl:A 1415 15 0.1702 0.0057 0.5333 2.2
37 1uzj:A 162 35 0.2979 0.0864 0.4000 2.4 1uzj:B, 1uzj:C, 1uzk:A
38 6kz1:A 97 25 0.2128 0.1031 0.4000 2.4 6y38:A, 6y38:B, 6y9n:A, 6y9o:A, 6y9p:A, 6y9p:B, 6y9p:I, 6y9p:E, 6y9p:G, 6y9p:K, 6y9q:B
39 5to3:B 367 25 0.2553 0.0327 0.4800 2.7 1dx5:I, 1dx5:J, 1dx5:K, 1dx5:L, 3gis:X, 3gis:Y, 3gis:Z
40 7she:A 541 33 0.2766 0.0240 0.3939 2.7 7she:B, 7shf:B
41 4aqb:A 345 43 0.2979 0.0406 0.3256 3.0 5ckq:A, 3dem:A, 3dem:B
42 3h5c:B 312 35 0.2553 0.0385 0.3429 3.4
43 5wgg:A 440 20 0.2128 0.0227 0.5000 4.0 5why:B
44 5why:A 418 20 0.2128 0.0239 0.5000 4.6
45 6f1c:A 291 27 0.2128 0.0344 0.3704 5.9 6f1c:C, 6f1d:A, 6f1h:A, 6f1h:C, 6f39:A, 6f39:B
46 5vyg:B 43 31 0.3191 0.3488 0.4839 6.2 5vyg:A, 5vyg:C
47 4bxw:B 287 29 0.2128 0.0348 0.3448 7.7 4bxw:A
48 8eph:A 91 31 0.3191 0.1648 0.4839 8.1 1edm:B, 1edm:C, 8eph:C
49 1z6c:A 87 29 0.1915 0.1034 0.3103 9.4

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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