Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
LYCSFCGKSQHEVRKLIAGPSVYICDECVDLMNDIIREEI

The query sequence (length=40) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 2ds5:B 44 40 0.9750 0.8864 0.9750 2.97e-23 2ds5:A, 2ds6:A, 2ds6:B, 2ds7:A, 2ds8:B, 2ds8:A, 1ovx:A, 1ovx:B
2 6lon:A 804 20 0.3000 0.0149 0.6000 0.072 6lon:B, 6lon:C, 6lon:D
3 5u7g:A 547 30 0.2750 0.0201 0.3667 0.35 4a9k:A, 4a9k:B, 6alc:B, 6axq:A, 6axq:B, 6axq:C, 6axq:D, 6ay3:A, 6ay3:B, 6ay5:A, 5cgp:A, 8cmz:A, 8cn0:A, 8cna:A, 8cnb:A, 8cnd:A, 2d82:A, 5dbm:A, 5dbm:B, 5dbm:C, 6dmk:A, 5eic:B, 5eng:A, 5ep7:A, 7evj:A, 6fqo:A, 6fqo:B, 6fqt:A, 6fqu:A, 6fr0:A, 6fr0:B, 6frf:A, 6frf:B, 6frf:C, 6frf:D, 8fup:A, 8fup:B, 8fv2:A, 8fv2:B, 8fv2:C, 8fv2:D, 8fvs:A, 8fvs:B, 8fxa:A, 8fxa:B, 8fxe:A, 8fxn:A, 8fxo:A, 8g6t:A, 8g6t:B, 8g6t:C, 8g6t:D, 8ga2:A, 8ga2:D, 8ga2:C, 8ga2:B, 5gh9:A, 5h85:A, 5i83:A, 5i86:A, 5i86:B, 5i89:A, 5j0d:A, 1jsp:B, 7juo:A, 7juo:B, 7juo:D, 7juo:C, 7juo:F, 7juo:E, 7juo:G, 7juo:H, 7kpy:A, 7kpy:B, 5ktu:A, 5ktu:B, 5ktw:A, 5ktw:B, 5ktw:C, 5ktx:A, 2l84:A, 2l85:A, 5lpj:A, 5lpl:A, 6lqx:B, 5mme:A, 5mme:B, 5mmg:A, 5mpk:A, 5mpk:B, 5mpn:A, 5mpz:A, 5mqe:A, 5mqe:B, 5mqg:A, 5mqg:B, 5mqk:A, 5mqk:B, 2n1a:B, 4n3w:A, 5nlk:A, 4nr4:A, 4nr4:B, 4nr5:A, 4nr6:A, 4nr7:A, 5nrw:A, 5nu3:A, 4nyv:A, 4nyv:B, 4nyv:C, 4nyv:D, 4nyw:A, 4nyx:A, 8og2:A, 5owk:A, 3p1c:A, 3p1d:A, 3p1f:A, 3p1f:B, 6qst:A, 6qst:B, 6qst:C, 6qst:D, 2rny:A, 6sqe:A, 6sqf:A, 6sqm:A, 6sqm:B, 6sqm:C, 3svh:A, 3svh:B, 6sxx:A, 6sxx:B, 5tb6:A, 1tot:A, 4tqn:A, 4ts8:A, 5u7g:B, 7uge:A, 7uge:B, 7ugl:A, 7ugl:B, 5w0e:A, 5w0f:A, 5w0i:A, 5w0l:A, 5w0l:B, 5w0q:A, 4whu:A, 7wx2:A, 7xh6:A, 7xh6:B, 7xhe:A, 7xhe:B, 7xi0:A, 7xi0:B, 7xm7:A, 7xm7:D, 7xm7:C, 7xne:A, 7xne:B, 7xng:A, 7xng:B, 5xxh:A, 6yij:A, 6yij:B, 6yij:C, 6yij:D, 6yij:E, 6yij:F, 6yij:G, 6yik:A, 6yik:C, 6yik:B, 6yil:A, 6yim:A, 4yk0:A, 4yk0:B, 4yk0:C, 4yk0:D
4 8ham:K 517 30 0.2750 0.0213 0.3667 0.40 6alb:A, 8hal:K
5 8han:K 500 30 0.2750 0.0220 0.3667 0.42 4n4f:A
6 7o2z:L 219 23 0.2250 0.0411 0.3913 0.44 7m51:L, 7m52:L, 7m53:L, 7m55:L
7 6mqr:L 213 21 0.2250 0.0423 0.4286 0.45
8 6mqc:L 217 21 0.2250 0.0415 0.4286 0.58 6mqc:B, 6n16:B, 6n16:L, 6n16:J, 6n16:D
9 2qsc:L 215 21 0.2250 0.0419 0.4286 0.77 7k75:B, 7k75:N, 7k75:D, 7k75:J, 7k76:B, 7k76:L
10 7c4c:A 332 30 0.2750 0.0331 0.3667 0.78 7c42:A, 7c43:A, 7c45:A, 7c47:A, 7c4b:A
11 7aqr:P 332 22 0.2250 0.0271 0.4091 0.99 7a23:T, 7a24:T, 7ar7:P, 7ar8:P, 7arb:P, 8bee:P, 8bpx:P, 8bq5:P, 8bq6:P
12 3d0v:A 214 21 0.2250 0.0421 0.4286 1.3 3d0l:A, 3dro:A, 3drq:A, 3drt:A, 3egs:A, 2f5b:L, 3idg:A, 3idi:A, 3idj:A, 3idm:A, 3idn:A, 3moa:L, 3mob:L, 3mod:L, 2p8l:A, 2p8m:A, 2p8p:A, 2pw1:A, 2pw2:A, 1tjg:L, 1tjh:L, 1tji:L, 1u8h:A, 1u8i:A, 1u8j:A, 1u8k:A, 1u8l:A, 1u8m:A, 1u8n:A, 1u8o:A, 1u8p:A, 1u8q:A, 1u91:A, 1u92:A, 1u93:A, 1u95:A
13 8qxc:L 214 21 0.2000 0.0374 0.3810 1.6 1axs:L, 1axs:A, 1d6v:L, 8qxc:B, 6xli:B, 6xli:D, 6xli:L, 6xtg:L, 6xuk:L
14 7ow1:K 214 21 0.2000 0.0374 0.3810 1.6 7oxn:K
15 1i7z:A 219 21 0.2000 0.0365 0.3810 1.6 1i7z:C, 7o30:L, 7o30:A, 7o31:L
16 6cdo:B 219 21 0.2000 0.0365 0.3810 1.6 8bbh:L, 6cdm:B, 6cdm:E, 6cdp:B, 1fl6:L, 1fl6:A, 3fo0:L, 3fo1:L, 3fo1:A, 3fo2:L, 3fo2:A, 8ja5:C, 4lkx:B, 3o2w:L, 6pyd:L, 6pyd:B, 5tkj:B, 5tkj:E, 5tkj:H, 5tkj:K, 7ucx:L, 7uen:L, 5vzy:L, 4xxd:A, 4xxd:D, 4yhi:B, 4yhi:L, 4yhk:L, 4yhm:L, 4yho:L
17 3mnz:A 220 21 0.2000 0.0364 0.3810 1.6 3mnw:A
18 6bf4:C 219 21 0.2250 0.0411 0.4286 1.7
19 7jwp:B 216 21 0.2000 0.0370 0.3810 1.8 7jwp:D, 7jwp:F, 7jwp:H, 7jwp:J, 7jwp:L, 7jwp:N, 7jwp:P, 7jwq:B, 7jwq:D
20 7mfr:A 219 21 0.2000 0.0365 0.3810 1.8 7mfr:X
21 3ixt:B 210 21 0.2000 0.0381 0.3810 1.8
22 6pds:L 212 21 0.2000 0.0377 0.3810 1.8 6pds:A
23 8f7z:B 212 21 0.2000 0.0377 0.3810 1.8 8f7z:D, 8f7z:F, 8f7z:H, 5i8c:B, 5i8e:B, 5i8e:D, 6me1:B, 6me1:D
24 8g8n:L 213 21 0.2000 0.0376 0.3810 1.8 8g2m:L, 8g8n:E, 8g8n:I, 8g8n:Q
25 3fct:A 213 21 0.2000 0.0376 0.3810 1.8 3fct:C, 1n7m:H, 1ngw:L, 1ngw:A, 1ngx:A, 1ngx:L, 1uwg:L, 1uwg:X
26 7tus:B 216 21 0.2000 0.0370 0.3810 1.8
27 8sjk:A 218 21 0.2000 0.0367 0.3810 1.9 8b9v:L, 8cn9:A, 8cn9:K, 5csz:L, 5csz:B, 4dgv:L, 4dgy:L, 8fdc:B, 6gfe:L, 3giz:L, 4hii:C, 5kzp:L, 5kzp:I, 5kzp:J, 5kzp:K, 3l7f:D, 6o24:B, 6o25:J, 6o28:B, 6o28:D, 6o29:B, 6o29:L, 6o2a:D, 6o2a:I, 6o2a:P, 6o2b:B, 6o2b:D, 6o2b:I, 6o2b:P, 6o2c:B, 7ssc:L, 6ulf:B, 7um3:M, 7um3:L, 6uoe:L, 6vln:L, 6vry:L, 7vux:L, 5wnb:L, 8y6a:D
28 1um4:L 219 21 0.2000 0.0365 0.3810 1.9 1aj7:L, 1c5c:L, 1gaf:L, 2hh0:L, 5kvl:L, 1um5:L
29 3pp4:L 219 21 0.2000 0.0365 0.3810 1.9 5e2v:L, 5e2w:L, 4fz8:L, 6h06:L, 6h06:D, 6h06:F, 6h06:B, 6h0e:L, 6h0e:D, 6h0e:F, 6h0e:B, 8ib1:A, 8t51:B, 8t51:D, 8t59:B, 8t59:D, 7u64:B, 7u64:D, 7u64:F, 7u64:H, 7u64:J, 7u64:L, 7u64:N, 7u64:P, 7u64:R, 6uc5:L, 6wfz:B, 6wfz:L, 6wg1:B, 6wg1:L
30 6pdu:L 219 21 0.2000 0.0365 0.3810 1.9 6vbo:L
31 2xzc:L 215 20 0.2000 0.0372 0.4000 2.6
32 6w9n:A 78 28 0.2250 0.1154 0.3214 2.7
33 5dds:A 514 37 0.3250 0.0253 0.3514 3.3 5dds:B, 5dds:C, 5dds:D, 5ddu:A, 5ddu:B, 5ddu:C, 5ddu:D, 5ddw:A, 5ddw:B, 5ddw:C, 5ddw:D, 6jc7:A, 6jc7:B, 6jc7:C, 6jc7:D, 6jc8:A, 6jc8:B, 6jc8:C, 6jc8:D, 6jc9:A, 6jc9:B, 6jc9:C, 6jc9:D, 8jt3:A, 8jt3:B, 8jt3:C, 8jt3:D
34 7kq3:A 825 20 0.2750 0.0133 0.5500 3.6 7kq3:B, 7kq3:C, 7kq3:D
35 5ymr:B 798 20 0.2750 0.0138 0.5500 3.6 5ymr:D, 5ymr:C, 5ymr:A
36 6ubi:B 212 21 0.2000 0.0377 0.3810 3.7 6ubi:E
37 1uuf:A 339 24 0.2750 0.0324 0.4583 4.1
38 6o3l:L 214 31 0.3000 0.0561 0.3871 4.3 6o3l:B
39 8dow:D 217 21 0.2250 0.0415 0.4286 4.5 8dow:H, 8dow:L, 8dp1:M, 8dp1:F, 8dp1:O
40 6zu5:LM0 97 28 0.2250 0.0928 0.3214 4.9
41 8r7i:A 628 36 0.3000 0.0191 0.3333 5.3
42 7sfx:D 214 24 0.2500 0.0467 0.4167 5.9 7sfx:B
43 7lfd:L 214 21 0.2000 0.0374 0.3810 6.3
44 8ova:AW 85 19 0.1750 0.0824 0.3684 6.4 7ase:S, 5opt:S, 8ove:AW, 4v8m:AW
45 8xfc:D 517 27 0.2000 0.0155 0.2963 6.5 8wdb:D
46 2awn:A 330 27 0.2250 0.0273 0.3333 6.6
47 2awn:C 344 27 0.2250 0.0262 0.3333 6.6
48 8dtr:B 216 21 0.2000 0.0370 0.3810 6.6 8dgx:L, 8dgx:B, 8dtr:F, 8dtt:B, 8dtt:F, 8dtx:L, 8dtx:B, 8fax:B, 8g8c:L, 8g8c:B, 6o26:B, 6o3j:L, 6o3j:B, 6o42:L, 6o42:A, 6pyc:L, 7rnj:L, 3so3:B
49 2awn:B 374 27 0.2250 0.0241 0.3333 6.6 2awo:A, 2awo:B, 2awo:C, 4ki0:A, 4ki0:B, 3puv:A, 3puv:B, 3puw:A, 3puw:B, 3pux:A, 3pux:B, 3puy:A, 3puy:B, 3puz:A, 3puz:B, 1q12:A, 1q12:B, 1q12:C, 1q12:D, 2r6g:A, 2r6g:B, 3rlf:A, 3rlf:B
50 7n59:A 590 27 0.1750 0.0119 0.2593 7.1 7n59:B, 7n5a:A, 7n5a:B, 7n5b:A, 7n5b:B
51 8rxh:Sc 85 19 0.1750 0.0824 0.3684 7.4 8a3w:Sc, 8a98:Sc, 6az1:c, 8ovj:Sc, 8rxx:Sc, 5t2a:AW
52 5drz:A 218 21 0.2000 0.0367 0.3810 8.2 5drz:L, 7n04:L, 7n05:L
53 4j6r:L 210 23 0.2000 0.0381 0.3478 8.4
54 1mje:A 600 14 0.1750 0.0117 0.5000 8.5
55 7a01:I2 91 30 0.2250 0.0989 0.3000 8.7 8a3d:j, 5aj0:Ap, 8b5l:p, 8b6c:p, 9bdl:AL43, 9bdn:AL43, 9bdp:AL43, 7bhp:Lp, 8bhf:c1, 8bpo:o2, 8btk:Bp, 7cpu:Lp, 7cpv:Lp, 4d5y:p, 4d67:p, 6d90:p, 6d9j:p, 9f1b:Bp, 9f1c:Bp, 9f1d:Bp, 7f5s:Lp, 8fkz:LX, 8fl2:LX, 8fl3:LX, 8fl4:LX, 8fl6:LX, 8fl7:LX, 8fl9:LX, 8fla:LX, 8flb:LX, 8flc:LX, 8fld:LX, 8fle:LX, 8flf:LX, 6frk:p, 6ftg:p, 6fti:p, 6ftj:p, 8g5y:Lp, 8g5z:Lp, 8g60:Lp, 8g61:Lp, 8g6j:Lp, 8glp:Lp, 6gz3:Ap, 6gz4:Ap, 6gz5:Ap, 6hcf:p3, 6hcj:p3, 6hcm:p3, 6hcq:p3, 8idt:X, 8idy:X, 8ie3:X, 8ifd:2j, 8ife:2j, 8ine:X, 8inf:X, 8ink:X, 6ip5:2j, 6ip6:2j, 6ip8:2j, 8ipd:X, 8ipx:X, 8ipy:X, 8ir1:X, 8ir3:X, 3j7o:p, 3j7p:p, 3j7q:p, 3j7r:p, 3j92:p, 3jag:p, 3jah:p, 3jai:p, 3jaj:p, 3jan:p, 8jdj:u, 8jdk:u, 8jdl:u, 8jdm:u, 8k2c:Lp, 5lks:Lp, 6lqm:X, 6lsr:X, 6lss:X, 7ls1:j2, 7ls2:j2, 6lu8:X, 5lzs:p, 5lzt:p, 5lzu:p, 5lzv:p, 5lzw:p, 5lzx:p, 5lzy:p, 5lzz:p, 7mdz:p, 6mtb:p, 6mtc:p, 6mtd:p, 6mte:p, 7nfx:p, 7nwg:p3, 7nwh:p, 7nwi:p, 7o7y:Bp, 7o7z:Bp, 7o80:Bp, 7o81:Bp, 7obr:p, 8ohd:Lp, 8oj0:Lp, 8oj5:Lp, 8oj8:Lp, 6ole:q, 6olf:q, 6olg:Ap, 6oli:q, 6olz:Ap, 6om0:q, 6om7:q, 7ow7:j, 7oya:p1, 7oyb:p1, 7oyc:p1, 7oyd:p, 8p2k:Bp, 6p5i:Ap, 6p5j:Ap, 6p5k:Ap, 6p5n:Ap, 8q7z:Bp, 8q87:Bp, 8qfd:p, 7qgg:q, 8qoi:Lp, 7qvp:Lp, 7qvp:Mp, 7qwq:p, 7qwr:p, 7qws:p, 6qzp:Lp, 6r5q:p, 6r6g:p, 6r6p:p, 6r7q:p, 8rjb:p, 8rjc:p, 8rjd:p, 8scb:p, 6sgc:p2, 6swa:n, 5t2c:j, 6t59:p3, 7tm3:p, 7toq:AL43, 7tor:AL43, 7tut:p, 7ucj:p, 7uck:p, 4ug0:Lp, 4ujc:Bp, 4ujd:Ap, 4uje:Cp, 4v5z:Bz, 4v6x:Cp, 6w6l:q, 6xa1:Lp, 7xnx:Lp, 7xny:Lp, 8xsx:Lp, 8xsy:Lp, 8xsz:Lp, 6y0g:Lp, 8y0w:Lp, 8y0x:Lp, 6y2l:Lp, 6y57:Lp, 6y6x:Lp, 8yoo:Lp, 8yop:Lp, 6z6l:Lp, 6z6m:Lp, 6z6n:Lp, 7zjw:Lr, 7zjx:Lr, 6zm7:Lp, 6zme:Lp, 6zmi:Lp, 6zmo:Lp, 6zvk:I2
56 2yep:A 173 16 0.2250 0.0520 0.5625 9.0 2yep:C
57 8y9c:B 1609 15 0.1750 0.0044 0.4667 9.3
58 8wfo:B 191 18 0.2750 0.0576 0.6111 9.4 8wfo:A
59 7oqy:Y 92 22 0.2500 0.1087 0.4545 9.5
60 4q4a:A 572 27 0.2250 0.0157 0.3333 9.7 3qf4:A, 6quz:A, 6quz:C, 6qv0:A, 6qv0:C, 6qv1:A, 6qv1:C, 6qv2:A, 6qv2:C

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417