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BioLiP
>protein
LSSALVISLSTGVSLFLGRFVFFNFQRENVAKQVPAQNGKTHFDAGDERAKEFAALLKSNDPVGFNLVDVLAWGSLGHIV
AYYILATSSNGYDPNFF

The query sequence (length=97) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 5zji:G 97 97 1.0000 1.0000 1.0000 1.86e-67
2 8wgh:G 98 97 0.8660 0.8571 0.8660 3.31e-60
3 3lw5:G 95 95 0.8454 0.8632 0.8632 1.25e-58 6igz:G, 2o01:G, 2wsc:G, 2wse:G, 2wsf:G, 4xk8:G, 4xk8:g
4 8bcv:G 94 94 0.8454 0.8723 0.8723 2.50e-58
5 7wg5:AG 99 98 0.8454 0.8283 0.8367 5.39e-58 7dkz:G, 8j6z:G, 8j7a:G, 8j7b:G, 5l8r:G, 7wfd:AG, 7wfe:BG, 7wg5:BG, 6yac:G, 6yez:G, 6zoo:G, 6zxs:G
6 4y28:G 91 93 0.7423 0.7912 0.7742 4.42e-45
7 6l35:G 98 96 0.6392 0.6327 0.6458 1.33e-42 8htu:G, 7ksq:G, 7kux:G, 7xqp:G
8 4rku:G 84 87 0.7010 0.8095 0.7816 3.42e-42
9 7a4p:G 99 94 0.5567 0.5455 0.5745 6.20e-32 6zzx:G, 6zzy:G
10 7yca:G 95 86 0.4639 0.4737 0.5233 1.97e-28
11 7zq9:G 95 92 0.3918 0.4000 0.4130 1.03e-16 7d0j:G, 7dz7:G, 7dz8:G, 8h2u:G, 7zqd:G, 7zqd:G2
12 8cmo:G 93 89 0.3196 0.3333 0.3483 1.87e-14
13 7zqc:G 80 89 0.3505 0.4250 0.3820 5.84e-14 7bgi:G, 7blx:G, 6jo5:G, 6jo6:G
14 6ijo:G 70 89 0.3505 0.4857 0.3820 6.68e-12 7r3k:G
15 6sl5:G 101 98 0.3814 0.3663 0.3776 5.73e-09
16 7a4p:K 86 80 0.3093 0.3488 0.3750 8.54e-07 6zzx:K, 6zzy:K
17 8bcv:K 88 84 0.2990 0.3295 0.3452 1.74e-05 7ew6:K, 7ewk:K, 7f9o:K, 7f9o:n, 2wse:K, 5zji:K
18 8j6z:K 84 84 0.2680 0.3095 0.3095 2.15e-05 7dkz:K, 8j7b:K, 5l8r:K, 4rku:K, 6yac:K, 6yez:K, 6zoo:K, 6zxs:K
19 8cmo:K 89 32 0.1959 0.2135 0.5938 2.86e-05
20 6igz:K 80 29 0.1649 0.2000 0.5517 7.38e-05
21 8htu:K 81 84 0.2784 0.3333 0.3214 8.74e-05 7ksq:K, 7kux:K, 6l35:K, 7xqp:K
22 8wgh:K 83 81 0.2784 0.3253 0.3333 2.24e-04
23 7wfd:AK 65 29 0.1340 0.2000 0.4483 2.75e-04 7wfe:BK, 7wg5:AK, 7wg5:BK
24 7dz7:K 86 27 0.1546 0.1744 0.5556 0.001 7bgi:K, 7blx:K, 7d0j:K, 7dz8:K, 6ijj:K, 6ijo:K, 7r3k:K, 7zq9:K, 7zqc:K, 7zqd:K, 7zqd:K2
25 7yca:K 87 50 0.2474 0.2759 0.4800 0.004
26 8j7a:K 56 26 0.1237 0.2143 0.4615 0.004
27 6sl5:K 84 78 0.2577 0.2976 0.3205 0.72
28 5odn:D 106 28 0.1134 0.1038 0.3929 2.1 5odn:F, 5odn:G, 5odn:B, 5odn:C, 5odn:A, 5odn:E, 5odn:H
29 4xk8:k 46 17 0.1031 0.2174 0.5882 2.2 4xk8:K
30 3tox:A 254 42 0.1546 0.0591 0.3571 2.3 3tox:B, 3tox:C, 3tox:D, 3tox:E, 3tox:F, 3tox:G, 3tox:I
31 8wm6:K 69 31 0.1443 0.2029 0.4516 3.3 8wmj:K, 8wmv:K, 8wmw:K
32 8b4l:C 311 18 0.0928 0.0289 0.5000 4.0 8b4l:E, 8b4l:A, 8b4l:B, 8b4l:D, 8b4l:F, 8b4m:B, 8b4m:D, 8b4m:E, 8b4m:F
33 5odp:G 100 16 0.0928 0.0900 0.5625 4.4 5odp:A
34 4a42:A 127 15 0.1031 0.0787 0.6667 5.4 4a42:B
35 7y5e:KN 70 29 0.1546 0.2143 0.5172 8.4 7y5e:K2, 7y7a:K7, 7y7a:Ko

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218