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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
>protein
LHHAVIPHGKGGRSSVSGIVATVFGATGFLGRYLVNHLGRMGSQVIVPYRCEPYDTMHLRPMGDLGQIIFMDWNGRDKDS
IRRAVEHSNVVINLVGREWETKNFDFEDVFVKIPQAIAQVSKEAGVEKFIHISHLNADIKSSSKYLRNKAVGEKEVRETF
PEATIIKPADIFGREDRFLNYFANIRSLGKKTVKQPVYIVDVTKGIINAIKDPDARGKTFAFVGPNRYLLFDLVQYVFAV
AHRPWTTRDKVERIHTTDRTLPHLPGLEDLGVQATPLELKAIEVLRRHRTVQPAKTV

The query sequence (length=297) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Homologs
to hit
1 5lnk:d 314 314 0.9933 0.9395 0.9395 0.0 6q9d:A9, 6qa9:A9, 6qbx:A9, 6qc2:A9, 6qc3:A9, 6qc4:A9, 6qc5:A9, 6qc6:A9, 6qc7:A9, 6qc8:A9, 6qc9:A9, 6qca:A9, 6qcf:A9, 7r45:P, 7r46:P, 7r47:P, 7r48:P, 7r4c:P, 7r4d:P, 7r4f:P, 7r4g:P, 7zd6:d, 7zdj:d, 7zdp:d, 6zk9:d, 6zkd:d, 6zke:d, 6zkf:d, 6zkh:d, 6zki:d, 6zkj:d, 6zkl:d, 6zkm:d, 6zkn:d, 6zkp:d, 6zkq:d, 6zkr:d, 6zks:d, 6zkt:d, 6zku:d, 6zkv:d
2 7v2d:J 297 297 0.9024 0.9024 0.9024 0.0 7v2f:J, 7v30:J, 7v32:J, 7v3m:J, 7vwj:J, 7vxu:J, 7vya:J, 7vyh:J, 7vz1:J, 7w00:J, 7w0h:J, 7w1o:J, 7w1p:J, 7w2k:J, 7w2l:J, 7w4j:J, 7w4k:J, 7w4l:J, 7w4m:J, 7w4n:J, 7w4q:J
3 8q0a:P 342 340 0.9630 0.8363 0.8412 0.0 7dgq:R, 7dgr:R, 7dgs:R, 7dgz:R, 7dh0:R, 7dkf:R2, 8q0f:P, 8q0j:P, 8q0m:P, 8q0o:P, 8q0q:P, 8q1p:P, 8q1u:P, 8q1y:P, 8q25:P, 8q45:P, 8q46:P, 8q47:P, 8q48:P, 8q49:P, 8q4a:P, 7qsd:P, 7qsk:P, 7qsl:P, 7qsm:P, 7qsn:P, 7qso:P, 7r41:P, 7r42:P, 7r43:P, 7r44:P, 7zdh:d, 7zdm:d, 7zeb:d, 6zkc:d, 6zkg:d, 6zkk:d, 6zko:d
4 8ud1:1P 342 340 0.9091 0.7895 0.7941 0.0 5gpn:p, 5gup:L, 8ueo:1P, 8uep:1P, 8ueq:1P, 8uer:1P, 8ues:1P, 8uet:1P, 8ueu:1P, 8uev:1P, 8uew:1P, 8uex:1P, 8uey:1P, 8uez:1P, 8ugh:1P, 8ugi:1P, 8ugj:1P, 8ugn:1P, 8ugn:5P, 8ugr:1P, 8ugr:5P, 7v2c:J, 7v2e:J, 7v2h:J, 7v2k:J, 7v2r:J, 7v31:J, 7v33:J, 7vb7:J, 7vbn:J, 7vbz:J, 7vxp:J, 7vy8:J, 7vyf:J, 7vyn:J, 7vzv:J, 7vzw:J, 7w0r:J, 7w0y:J, 7w1t:J, 7w1u:J, 7w1v:J, 7w1z:J, 7w20:J, 7w2r:J, 7w2u:J, 7w2y:J, 7w31:J, 7w32:J, 7w35:J, 7w4c:J, 7w4d:J, 7w4e:J, 7w4f:J, 7w4g:J
5 5xtb:J 337 336 0.8215 0.7240 0.7262 6.28e-179 5xtd:J, 5xth:J, 5xti:J, 5xti:BJ
6 8rgq:P 314 312 0.8013 0.7580 0.7628 1.18e-168 7ak5:P, 6g72:P, 8rgt:P
7 7ak6:P 288 297 0.7710 0.7951 0.7710 8.00e-164
8 7b93:P 342 340 0.8013 0.6959 0.7000 1.05e-163 8c2s:P, 8ca3:P, 8ca5:P, 6g2j:P, 8iao:P, 8iap:P, 8ib4:P, 8ib5:P, 8ib9:P, 8iba:P, 8ibd:P, 8ibe:P, 8ic2:P, 8ic3:P, 8olt:P, 8om1:P, 7psa:P, 8pw5:P1, 8pw6:P1, 8pw7:P1, 8rgp:P, 8rgr:P, 6zr2:P, 6ztq:P
9 8b9z:P 377 339 0.5185 0.4085 0.4543 5.25e-90 8ba0:P, 8esw:A9, 8esz:A9
10 8e73:A9 330 253 0.3906 0.3515 0.4585 8.12e-68 6x89:A9
11 7aqr:P 332 247 0.3973 0.3554 0.4777 1.81e-62 7a23:T, 7a24:T, 7ar7:P, 7ar8:P, 7arb:P, 8bee:P, 8bpx:P, 8bq5:P, 8bq6:P
12 7arc:P 347 229 0.3300 0.2824 0.4279 5.97e-60 7ard:P
13 7b0n:P 355 304 0.3737 0.3127 0.3651 1.44e-55 6gcs:E, 7o6y:E, 7o71:E, 6rfr:E, 6rfs:E, 6y79:E, 6yj4:P
14 7zm7:E 353 232 0.3199 0.2691 0.4095 4.59e-55 7zmb:E, 7zmg:E
15 6rfq:E 263 235 0.3030 0.3422 0.3830 1.42e-51
16 8iuf:A9 484 253 0.2795 0.1715 0.3281 9.90e-41 8j9h:A9, 8j9i:A9, 8j9j:A9
17 8gym:a9 340 252 0.2997 0.2618 0.3532 3.24e-36 8b6f:A1, 8bqs:A1, 8gym:A9, 8gzu:a9, 8gzu:A9, 7tgh:A9
18 6jkh:A 212 161 0.1347 0.1887 0.2484 0.13 6jkh:B
19 1g0o:C 281 36 0.0572 0.0605 0.4722 0.56 1doh:A, 1doh:B, 1g0n:A, 1g0n:B, 1g0o:A, 1g0o:B, 1g0o:D, 1ybv:A, 1ybv:B
20 3bkb:A 373 56 0.0707 0.0563 0.3750 0.70 3cbl:A, 4e93:A, 6jmf:A, 7t1k:A, 7t1l:A, 7t1l:B
21 3rkr:A 221 37 0.0505 0.0679 0.4054 1.0 3rkr:B
22 8e0q:A 1689 160 0.1212 0.0213 0.2250 1.4 8d4x:A, 8e0q:B
23 8b6g:CE 321 95 0.0673 0.0623 0.2105 1.6 8bqs:CE, 8gym:2e, 8gym:2E
24 4fj0:D 261 41 0.0505 0.0575 0.3659 2.6 4fiz:A, 4fj0:A, 4fj0:B, 4fj0:C, 4fj1:A, 4fj1:B, 4fj1:C, 4fj1:D, 4fj2:A, 4fj2:B, 4fj2:C, 4fj2:D, 3qwf:A, 3qwf:B, 3qwf:C, 3qwf:D, 3qwf:E, 3qwf:F, 3qwf:G, 3qwf:H, 3qwh:A, 3qwh:B, 3qwh:C, 3qwh:D, 3qwi:A, 3qwi:B, 3qwi:C, 3qwi:D
25 8j9f:D 749 63 0.0606 0.0240 0.2857 3.2 8j9f:A, 8j9f:B
26 2pk3:A 309 25 0.0370 0.0356 0.4400 4.1 2pk3:B
27 4k26:A 265 30 0.0404 0.0453 0.4000 5.9 3gmd:A, 3gmd:B, 3gmd:C, 3gmd:D, 3gmd:E, 3gmd:F, 3gmd:G, 3gmd:H, 4k26:B, 4nmh:A, 4nmh:B, 4nmh:C, 4nmh:D, 5pgz:A, 5pgz:B, 5qij:A, 5qij:B, 1y5m:A, 1y5m:B, 1y5r:A, 1y5r:B
28 7yb2:D 264 38 0.0471 0.0530 0.3684 6.7 8hfj:A, 8hfj:B, 8hfj:C, 8hfj:D, 8hfk:A, 8hfk:B, 8hfk:C, 8hfk:D, 7yb1:D, 7yb1:A, 7yb1:B, 7yb1:C, 7yb2:A, 7yb2:B, 7yb2:C
29 4iju:B 282 28 0.0404 0.0426 0.4286 7.4 4bb5:A, 4bb5:B, 4bb5:C, 4bb5:D, 4bb6:A, 4bb6:B, 2bel:A, 2bel:B, 2bel:C, 2bel:D, 3byz:A, 3byz:B, 3byz:C, 3byz:D, 3bzu:A, 3bzu:B, 3bzu:C, 3bzu:D, 4c7j:A, 4c7j:B, 4c7j:C, 4c7j:D, 4c7k:A, 4c7k:B, 4c7k:C, 4c7k:D, 3ch6:A, 3ch6:B, 3ch6:D, 3ch6:E, 3czr:A, 3czr:B, 3d3e:A, 3d3e:B, 3d3e:C, 3d3e:D, 3d4n:A, 3d4n:B, 3d4n:C, 3d4n:D, 3d5q:A, 3d5q:B, 3d5q:C, 3d5q:D, 3ey4:A, 3ey4:B, 3ey4:C, 3ey4:D, 3fco:A, 3fco:B, 3frj:A, 3frj:B, 3h6k:A, 3h6k:B, 3h6k:C, 3h6k:D, 3hfg:A, 3hfg:B, 3hfg:C, 3hfg:D, 4hfr:A, 4hfr:B, 4hx5:A, 4hx5:B, 4hx5:C, 4hx5:D, 4iju:A, 4iju:D, 4iju:E, 4ijv:A, 4ijv:B, 4ijv:D, 4ijv:E, 4ijw:A, 4ijw:B, 4ijw:D, 4ijw:E, 2ilt:A, 2irw:A, 2irw:B, 2irw:C, 2irw:D, 2irw:E, 2irw:F, 2irw:G, 2irw:H, 4k1l:A, 4k1l:B, 4k1l:C, 4k1l:D, 6nj7:A, 6nj7:B, 6nj7:C, 6nj7:D, 3oq1:A, 3oq1:B, 3oq1:C, 3oq1:D, 4p38:A, 4p38:B, 3pdj:A, 3pdj:B, 5pgu:A, 5pgu:B, 5pgu:D, 5pgu:E, 5pgv:A, 5pgv:B, 5pgv:D, 5pgv:E, 5pgw:A, 5pgw:B, 5pgw:D, 5pgw:E, 5pgx:A, 5pgx:B, 5pgx:D, 5pgx:E, 5pgy:A, 5pgy:B, 5pgy:D, 5pgy:E, 5qii:A, 5qii:B, 5qii:D, 5qii:E, 3qqp:A, 3qqp:B, 3qqp:C, 3qqp:D, 2rbe:A, 2rbe:B, 2rbe:C, 2rbe:D, 3tfq:A, 3tfq:B, 3tfq:D, 3tfq:E, 1xu7:A, 1xu7:B, 1xu7:C, 1xu7:D, 1xu9:A, 1xu9:B, 1xu9:C, 1xu9:D, 4yyz:A, 4yyz:B
30 3slh:D 440 48 0.0572 0.0386 0.3542 7.6 4egr:A, 4egr:B, 4egr:C, 4egr:D, 4egr:E, 4egr:F, 3slh:A, 3slh:B, 3slh:C, 4znd:A
31 7lgb:A 282 34 0.0505 0.0532 0.4412 8.1
32 6ykp:B 255 53 0.0505 0.0588 0.2830 9.7 6ykp:C, 6ykp:D, 6ykp:A, 6ykp:E, 6ykr:B, 6ykr:C, 6ykr:D, 6ykr:A, 6ykr:E

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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